Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.2□□□□□ -2.22
COL2A1P02458 MIR1245B-201ENST00000636115 69 ntBASIC1.2□□□□□ -2.22
COL2A1P02458 RNU6-363P-201ENST00000362895 105 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 Y_RNA.220-201ENST00000364244 109 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 RNU4-36P-201ENST00000364294 144 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 Y_RNA.247-201ENST00000364500 92 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 Y_RNA.258-201ENST00000364613 105 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 SNORA1.1-201ENST00000364671 133 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 Y_RNA.290-201ENST00000364879 114 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 RNU6-1319P-201ENST00000390855 104 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 RNU6-747P-201ENST00000390928 104 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 RNU6-241P-201ENST00000391148 104 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 SNORA26.6-201ENST00000391256 115 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 RNU4-69P-201ENST00000410677 143 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 RNU6-177P-201ENST00000411257 104 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 MRPL35P3-201ENST00000421557 364 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 AC245047.7-201ENST00000440265 293 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 snoU13.27-201ENST00000459278 104 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 Y_RNA.659-201ENST00000515994 113 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 AC026421.1-201ENST00000519101 163 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 MIR3152-201ENST00000579801 74 ntBASIC1.19□□□□□ -2.22
COL2A1P02458 RNU6-832P-201ENST00000363319 107 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 MIR513A1-201ENST00000385138 129 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNU6-1307P-201ENST00000391012 103 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 MIR1912-201ENST00000410389 80 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.18□□□□□ -2.22
COL2A1P02458 RNU6-893P-201ENST00000458841 100 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 HAR1A.1-201ENST00000459583 118 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 MIR4299-201ENST00000577899 72 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 MIR4529-201ENST00000578110 78 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 MIR4714-201ENST00000580728 77 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 U7.3-201ENST00000616123 62 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.18□□□□□ -2.22
COL2A1P02458 Y_RNA.73-201ENST00000362910 113 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNA5SP62-201ENST00000363457 110 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNU6-439P-201ENST00000384188 106 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 MIR452-201ENST00000385020 85 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 SNORA48.1-201ENST00000390879 135 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNA5SP100-201ENST00000410903 110 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNA5SP59-201ENST00000410922 110 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RPL23AP6-201ENST00000446637 472 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 AC109327.2-201ENST00000448339 378 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNA5SP121-201ENST00000516537 101 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNU6-267P-201ENST00000516714 103 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNA5SP137-201ENST00000516833 135 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 MIR4777-201ENST00000583710 86 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNU6-86P-201ENST00000606534 107 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
COL2A1P02458 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.18□□□□□ -2.22
COL2A1P02458 RNU6-170P-201ENST00000362832 104 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 SNORA1.2-201ENST00000365189 134 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 Y_RNA.558-201ENST00000384685 113 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 MIR660-201ENST00000385235 97 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 Y_RNA.601-201ENST00000410500 113 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.17□□□□□ -2.22
COL2A1P02458 UBL5P1-201ENST00000507979 193 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 RNU6-947P-201ENST00000516264 106 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 RNU6-917P-201ENST00000516294 104 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.17□□□□□ -2.22
COL2A1P02458 AL109933.3-201ENST00000619095 188 ntBASIC1.17□□□□□ -2.22
COL2A1P02458 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
COL2A1P02458 Y_RNA.17-201ENST00000362433 111 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 Y_RNA.93-201ENST00000363066 109 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 SNORA18-201ENST00000384416 132 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 MIR520C-201ENST00000385005 87 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
COL2A1P02458 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
COL2A1P02458 RNU6-972P-201ENST00000391208 107 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 RNU6-1086P-201ENST00000410930 100 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 RNA5SP450-201ENST00000411206 102 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 HSPE1P24-201ENST00000450782 238 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 RNU2-13P-201ENST00000515909 113 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 MIR3973-201ENST00000579824 107 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 MIR548AO-201ENST00000579992 96 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 FAM71BP1-201ENST00000604431 523 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 AC103810.8-201ENST00000607347 118 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 MIR376B-201ENST00000614515 100 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 Y_RNA.818-201ENST00000618813 71 ntBASIC1.16□□□□□ -2.22
COL2A1P02458 Y_RNA.78-201ENST00000362970 110 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 SNORA25.3-201ENST00000363205 127 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 RNU6-497P-201ENST00000365316 104 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 RNA5SP259-201ENST00000365541 109 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 Y_RNA.593-201ENST00000410292 98 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 RPS29P28-201ENST00000446439 141 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 RNU7-41P-201ENST00000515917 61 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 RNU7-53P-201ENST00000516705 60 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 MIR4764-201ENST00000580680 88 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 MIR8055-201ENST00000610739 97 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 MIR6857-201ENST00000613267 93 ntBASIC1.15□□□□□ -2.23
COL2A1P02458 RNU6-950P-201ENST00000384651 107 ntBASIC1.14□□□□□ -2.23
COL2A1P02458 MIR450A2-201ENST00000385022 100 ntBASIC1.14□□□□□ -2.23
COL2A1P02458 RNU6-602P-201ENST00000411155 105 ntBASIC1.14□□□□□ -2.23
COL2A1P02458 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.14□□□□□ -2.23
COL2A1P02458 AC027119.1-201ENST00000440877 241 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 122.4 ms