Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-1268P-201ENST00000391214 107 ntBASIC1.22□□□□□ -2.21
LDLRP01130 RNU6-1239P-201ENST00000391310 107 ntBASIC1.22□□□□□ -2.21
LDLRP01130 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.22□□□□□ -2.21
LDLRP01130 RPL39P39-201ENST00000455840 151 ntBASIC1.22□□□□□ -2.21
LDLRP01130 RNU7-53P-201ENST00000516705 60 ntBASIC1.22□□□□□ -2.21
LDLRP01130 MIR6788-201ENST00000618842 66 ntBASIC1.22□□□□□ -2.21
LDLRP01130 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
LDLRP01130 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.21
LDLRP01130 Y_RNA.78-201ENST00000362970 110 ntBASIC1.21□□□□□ -2.22
LDLRP01130 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
LDLRP01130 RNU6-49P-201ENST00000384256 107 ntBASIC1.21□□□□□ -2.22
LDLRP01130 RNU6-939P-201ENST00000384634 107 ntBASIC1.21□□□□□ -2.22
LDLRP01130 MIR520C-201ENST00000385005 87 ntBASIC1.21□□□□□ -2.22
LDLRP01130 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.21□□□□□ -2.22
LDLRP01130 RNY4P30-201ENST00000410216 95 ntBASIC1.21□□□□□ -2.22
LDLRP01130 RNU4-69P-201ENST00000410677 143 ntBASIC1.21□□□□□ -2.22
LDLRP01130 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.21□□□□□ -2.22
LDLRP01130 AC090844.1-201ENST00000422019 156 ntBASIC1.21□□□□□ -2.22
LDLRP01130 RNU7-113P-201ENST00000459273 62 ntBASIC1.21□□□□□ -2.22
LDLRP01130 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.21□□□□□ -2.22
LDLRP01130 MIR548AE2-201ENST00000583456 67 ntBASIC1.21□□□□□ -2.22
LDLRP01130 AL096861.1-201ENST00000610899 123 ntBASIC1.21□□□□□ -2.22
LDLRP01130 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.21□□□□□ -2.22
LDLRP01130 RNA5SP327-201ENST00000362494 101 ntBASIC1.2□□□□□ -2.22
LDLRP01130 RNU6-363P-201ENST00000362895 105 ntBASIC1.2□□□□□ -2.22
LDLRP01130 RNU6-1099P-201ENST00000363533 107 ntBASIC1.2□□□□□ -2.22
LDLRP01130 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
LDLRP01130 SNORA70.7-201ENST00000384159 133 ntBASIC1.2□□□□□ -2.22
LDLRP01130 MIR605-201ENST00000385078 83 ntBASIC1.2□□□□□ -2.22
LDLRP01130 AC048334.1-201ENST00000477975 159 ntBASIC1.2□□□□□ -2.22
LDLRP01130 MIR3152-201ENST00000579801 74 ntBASIC1.2□□□□□ -2.22
LDLRP01130 MIR4764-201ENST00000580680 88 ntBASIC1.2□□□□□ -2.22
LDLRP01130 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
LDLRP01130 MIR3192-201ENST00000584920 77 ntBASIC1.2□□□□□ -2.22
LDLRP01130 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
LDLRP01130 RNU6-616P-201ENST00000384353 107 ntBASIC1.19□□□□□ -2.22
LDLRP01130 MIR577-201ENST00000385196 96 ntBASIC1.19□□□□□ -2.22
LDLRP01130 RNU6-679P-201ENST00000391003 106 ntBASIC1.19□□□□□ -2.22
LDLRP01130 MIR548J-201ENST00000408833 112 ntBASIC1.19□□□□□ -2.22
LDLRP01130 MIR1912-201ENST00000410389 80 ntBASIC1.19□□□□□ -2.22
LDLRP01130 RPL39P25-201ENST00000449384 154 ntBASIC1.19□□□□□ -2.22
LDLRP01130 snoU13.16-201ENST00000459350 104 ntBASIC1.19□□□□□ -2.22
LDLRP01130 RNU7-41P-201ENST00000515917 61 ntBASIC1.19□□□□□ -2.22
LDLRP01130 SNORA31.2-201ENST00000516019 134 ntBASIC1.19□□□□□ -2.22
LDLRP01130 RNU7-43P-201ENST00000516554 64 ntBASIC1.19□□□□□ -2.22
LDLRP01130 RNA5SP33-201ENST00000516687 98 ntBASIC1.19□□□□□ -2.22
LDLRP01130 AC141557.1-201ENST00000540982 400 ntBASIC1.19□□□□□ -2.22
LDLRP01130 MIR548AO-201ENST00000579992 96 ntBASIC1.19□□□□□ -2.22
LDLRP01130 AC008133.2-201ENST00000624540 351 ntBASIC1.19□□□□□ -2.22
LDLRP01130 Z97988.1-201ENST00000637697 135 ntBASIC1.19□□□□□ -2.22
LDLRP01130 Y_RNA.205-201ENST00000364128 113 ntBASIC1.18□□□□□ -2.22
LDLRP01130 RNU4-67P-201ENST00000364569 141 ntBASIC1.18□□□□□ -2.22
LDLRP01130 RNU6-1131P-201ENST00000364955 107 ntBASIC1.18□□□□□ -2.22
LDLRP01130 Y_RNA.299-201ENST00000364973 94 ntBASIC1.18□□□□□ -2.22
LDLRP01130 RNU6-1113P-201ENST00000384348 107 ntBASIC1.18□□□□□ -2.22
LDLRP01130 MIR618-201ENST00000385287 98 ntBASIC1.18□□□□□ -2.22
LDLRP01130 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
LDLRP01130 MTATP8P2-201ENST00000435212 202 ntBASIC1.18□□□□□ -2.22
LDLRP01130 snoU13.25-201ENST00000458945 104 ntBASIC1.18□□□□□ -2.22
LDLRP01130 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
LDLRP01130 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.18□□□□□ -2.22
LDLRP01130 SNORA1.1-201ENST00000364671 133 ntBASIC1.17□□□□□ -2.22
LDLRP01130 Y_RNA.360-201ENST00000365512 102 ntBASIC1.17□□□□□ -2.22
LDLRP01130 SNORA32-201ENST00000384072 121 ntBASIC1.17□□□□□ -2.22
LDLRP01130 Y_RNA.544-201ENST00000384650 113 ntBASIC1.17□□□□□ -2.22
LDLRP01130 RNU6-1307P-201ENST00000391012 103 ntBASIC1.17□□□□□ -2.22
LDLRP01130 RNU6-602P-201ENST00000411155 105 ntBASIC1.17□□□□□ -2.22
LDLRP01130 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.17□□□□□ -2.22
LDLRP01130 RNU6-893P-201ENST00000458841 100 ntBASIC1.17□□□□□ -2.22
LDLRP01130 SNORA40.13-201ENST00000516379 120 ntBASIC1.17□□□□□ -2.22
LDLRP01130 AC006254.2-201ENST00000603259 279 ntBASIC1.17□□□□□ -2.22
LDLRP01130 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LDLRP01130 Y_RNA.818-201ENST00000618813 71 ntBASIC1.17□□□□□ -2.22
LDLRP01130 MIR6767-201ENST00000637302 66 ntBASIC1.17□□□□□ -2.22
LDLRP01130 SNORA25.3-201ENST00000363205 127 ntBASIC1.16□□□□□ -2.22
LDLRP01130 Y_RNA.374-201ENST00000365606 101 ntBASIC1.16□□□□□ -2.22
LDLRP01130 RNY1P7-201ENST00000384743 110 ntBASIC1.16□□□□□ -2.22
LDLRP01130 MIR1302-7-201ENST00000408841 72 ntBASIC1.16□□□□□ -2.22
LDLRP01130 RNA5SP261-201ENST00000410536 106 ntBASIC1.16□□□□□ -2.22
LDLRP01130 SNORA7.5-201ENST00000410672 110 ntBASIC1.16□□□□□ -2.22
LDLRP01130 RNU6-733P-201ENST00000410759 104 ntBASIC1.16□□□□□ -2.22
LDLRP01130 RPS3AP1-201ENST00000413190 320 ntBASIC1.16□□□□□ -2.22
LDLRP01130 AC245047.7-201ENST00000440265 293 ntBASIC1.16□□□□□ -2.22
LDLRP01130 RNU6-158P-201ENST00000517104 100 ntBASIC1.16□□□□□ -2.22
LDLRP01130 RNU7-35P-201ENST00000517174 62 ntBASIC1.16□□□□□ -2.22
LDLRP01130 DEFB131E-201ENST00000532329 154 ntBASIC1.16□□□□□ -2.22
LDLRP01130 MIR548Z-201ENST00000584743 97 ntBASIC1.16□□□□□ -2.22
LDLRP01130 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
LDLRP01130 RNY3P2-201ENST00000362918 102 ntBASIC1.15□□□□□ -2.23
LDLRP01130 RNU6-832P-201ENST00000363319 107 ntBASIC1.15□□□□□ -2.23
LDLRP01130 Y_RNA.155-201ENST00000363632 101 ntBASIC1.15□□□□□ -2.23
LDLRP01130 RNU6-409P-201ENST00000384114 104 ntBASIC1.15□□□□□ -2.23
LDLRP01130 Y_RNA.507-201ENST00000384500 99 ntBASIC1.15□□□□□ -2.23
LDLRP01130 MIR222-201ENST00000384992 110 ntBASIC1.15□□□□□ -2.23
LDLRP01130 RNU6-910P-201ENST00000390844 107 ntBASIC1.15□□□□□ -2.23
LDLRP01130 MIR1285-1-201ENST00000408593 84 ntBASIC1.15□□□□□ -2.23
LDLRP01130 RNU6-521P-201ENST00000516663 105 ntBASIC1.15□□□□□ -2.23
LDLRP01130 MIR4694-201ENST00000578534 80 ntBASIC1.15□□□□□ -2.23
LDLRP01130 PRELID3BP2-201ENST00000605362 201 ntBASIC1.15□□□□□ -2.23
LDLRP01130 AC012531.4-201ENST00000616509 177 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 198.4 ms