Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC107027.2-201ENST00000512197 115 ntBASIC0.46□□□□□ -2.34
PDGFBP01127 Y_RNA.674-201ENST00000516362 113 ntBASIC0.46□□□□□ -2.34
PDGFBP01127 MIR3658-201ENST00000636291 56 ntBASIC0.46□□□□□ -2.34
PDGFBP01127 RNU6-690P-201ENST00000365242 106 ntBASIC0.45□□□□□ -2.34
PDGFBP01127 RNY1P6-201ENST00000384193 109 ntBASIC0.45□□□□□ -2.34
PDGFBP01127 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.45□□□□□ -2.34
PDGFBP01127 RNU7-113P-201ENST00000459273 62 ntBASIC0.45□□□□□ -2.34
PDGFBP01127 AP002392.1-201ENST00000537692 208 ntBASIC0.45□□□□□ -2.34
PDGFBP01127 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.44□□□□□ -2.34
PDGFBP01127 RNU6-508P-201ENST00000363231 103 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 RNU4-67P-201ENST00000364569 141 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 Y_RNA.337-201ENST00000365312 102 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 Y_RNA.430-201ENST00000384081 110 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 Y_RNA.470-201ENST00000384307 117 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 MIR644A-201ENST00000385262 94 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 AL157398.1-201ENST00000452981 186 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 AC002350.1-201ENST00000490759 375 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 RNA5SP33-201ENST00000516687 98 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 DEFB131E-201ENST00000532329 154 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.44□□□□□ -2.34
PDGFBP01127 Y_RNA.757-201ENST00000578934 114 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 AC090897.1-201ENST00000580909 226 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 SNORD92-201ENST00000585078 85 ntBASIC0.44□□□□□ -2.34
PDGFBP01127 Y_RNA.401-201ENST00000383965 117 ntBASIC0.43□□□□□ -2.34
PDGFBP01127 AL512326.2-201ENST00000426359 151 ntBASIC0.43□□□□□ -2.34
PDGFBP01127 RNU6-240P-201ENST00000516098 97 ntBASIC0.43□□□□□ -2.34
PDGFBP01127 SNORA25.12-201ENST00000516202 82 ntBASIC0.43□□□□□ -2.34
PDGFBP01127 RNU6-861P-201ENST00000516745 106 ntBASIC0.43□□□□□ -2.34
PDGFBP01127 RNU6-448P-201ENST00000517052 107 ntBASIC0.43□□□□□ -2.34
PDGFBP01127 AC092634.7-201ENST00000621022 103 ntBASIC0.43□□□□□ -2.34
PDGFBP01127 MIR6841-201ENST00000637129 72 ntBASIC0.43□□□□□ -2.34
PDGFBP01127 RNY1P11-201ENST00000363759 113 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 SNORA50A-201ENST00000384225 134 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 Y_RNA.476-201ENST00000384347 108 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 MIR1265-201ENST00000408444 86 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 AL022718.1-201ENST00000412004 84 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.42□□□□□ -2.34
PDGFBP01127 RNU7-79P-201ENST00000516082 62 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 SNORA25.16-201ENST00000516741 121 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 MIR3678-201ENST00000578455 94 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 MIR4491-201ENST00000581087 68 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 MIR6718-201ENST00000616153 80 ntBASIC0.42□□□□□ -2.34
PDGFBP01127 RNU6-312P-201ENST00000364629 107 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 RNY1P13-201ENST00000365030 105 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 Y_RNA.497-201ENST00000384447 98 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 Y_RNA.552-201ENST00000384665 112 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 RNU6ATAC23P-201ENST00000408448 123 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 RNA5SP144-201ENST00000410846 116 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 RNU6-138P-201ENST00000515952 107 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 AC133485.4-201ENST00000561835 220 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 MIR4802-201ENST00000581881 80 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 SNORA25.18-201ENST00000607153 114 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 MIR8066-201ENST00000617280 78 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 AC105081.1-201ENST00000617727 106 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 AC141273.2-201ENST00000618989 130 ntBASIC0.41□□□□□ -2.34
PDGFBP01127 RNU6-349P-201ENST00000362402 107 ntBASIC0.4□□□□□ -2.35
PDGFBP01127 RNA5SP517-201ENST00000364724 117 ntBASIC0.4□□□□□ -2.35
PDGFBP01127 Y_RNA.567-201ENST00000384736 106 ntBASIC0.4□□□□□ -2.35
PDGFBP01127 SNORD100-201ENST00000408573 76 ntBASIC0.4□□□□□ -2.35
PDGFBP01127 SNORA68.3-201ENST00000515906 83 ntBASIC0.4□□□□□ -2.35
PDGFBP01127 MTND5P34-201ENST00000568888 325 ntBASIC0.4□□□□□ -2.35
PDGFBP01127 MIR6082-201ENST00000613604 109 ntBASIC0.4□□□□□ -2.35
PDGFBP01127 AL627230.5-201ENST00000619807 58 ntBASIC0.4□□□□□ -2.35
PDGFBP01127 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
PDGFBP01127 SNORD18B-201ENST00000365659 72 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 MIR329-2-201ENST00000385029 84 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 Y_RNA.588-201ENST00000391254 102 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 SNORA75.5-201ENST00000391291 81 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 MIR1912-201ENST00000410389 80 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 RNU5E-9P-201ENST00000411164 104 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 RNU6-893P-201ENST00000458841 100 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 AC074198.2-201ENST00000508153 258 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 Y_RNA.697-201ENST00000516776 113 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 AC021443.1-201ENST00000604478 211 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 AC072026.1-201ENST00000605023 201 ntBASIC0.39□□□□□ -2.35
PDGFBP01127 AC090625.1-201ENST00000357130 210 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 Y_RNA.42-201ENST00000362660 108 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 RNU6-949P-201ENST00000384040 107 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 Y_RNA.435-201ENST00000384095 112 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 RNU6-239P-201ENST00000390990 99 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 RNU6-1194P-201ENST00000516208 104 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 RNU6-469P-201ENST00000516253 101 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 RNU2-35P-201ENST00000516446 142 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 Y_RNA.686-201ENST00000516548 134 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 RNA5SP94-201ENST00000516917 108 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 AC138907.4-201ENST00000570107 226 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 MIR4305-201ENST00000583252 102 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 MIR548AE2-201ENST00000583456 67 ntBASIC0.38□□□□□ -2.35
PDGFBP01127 Y_RNA.120-201ENST00000363304 110 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 SNORD18A-201ENST00000363753 72 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 RNU6-309P-201ENST00000364573 106 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 RNU6-200P-201ENST00000364743 107 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 Y_RNA.584-201ENST00000391090 114 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 MTATP6P21-201ENST00000440681 189 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 RNU7-164P-201ENST00000459221 62 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 Y_RNA.662-201ENST00000516028 97 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 RNA5SP236-201ENST00000516169 116 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 RNU6-531P-201ENST00000516694 104 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.37□□□□□ -2.35
PDGFBP01127 U6.109-201ENST00000636749 87 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms