Protein–RNA interactions for Protein: O95639

CPSF4, Cleavage and polyadenylation specificity factor subunit 4, humanhuman

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4O95639 RNU7-161P-201ENST00000517289 62 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 AC006504.6-201ENST00000590142 199 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 AL356055.1-201ENST00000602528 446 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 AL109933.3-201ENST00000619095 188 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 AL162376.1-201ENST00000624117 175 ntBASIC-0.18□□□□□ -2.44
CPSF4O95639 SNORD115-2-201ENST00000362842 82 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 RNU6-161P-201ENST00000363051 106 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 SNORD115-20-201ENST00000365099 82 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 RNU6-639P-201ENST00000384074 107 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 MIR1302-6-201ENST00000408466 90 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 AL022718.1-201ENST00000412004 84 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 RNU7-159P-201ENST00000459284 62 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 SNORD67.1-201ENST00000516618 108 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 RNU7-137P-201ENST00000516788 62 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 AL359881.1-201ENST00000602916 267 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 AL360085.1-201ENST00000604713 532 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 RNU2-4P-201ENST00000606190 192 ntBASIC-0.19□□□□□ -2.44
CPSF4O95639 RNU6-238P-201ENST00000363313 106 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 Y_RNA.280-201ENST00000364765 112 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 RNY1P2-201ENST00000364820 117 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 MIR329-2-201ENST00000385029 84 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 RNU6-269P-201ENST00000391077 97 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 RNU7-165P-201ENST00000458864 60 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 RNU7-104P-201ENST00000459398 79 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 RNU6-635P-201ENST00000516651 102 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 MIR548AE2-201ENST00000583456 67 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 MIR548AD-201ENST00000584780 82 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 AC105081.1-201ENST00000617727 106 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 MIR8062-201ENST00000621515 85 ntBASIC-0.2□□□□□ -2.44
CPSF4O95639 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 SNORA25.7-201ENST00000364375 127 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 RNU6-923P-201ENST00000364753 107 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 RNU6-643P-201ENST00000384018 107 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 Y_RNA.518-201ENST00000384552 113 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 MIR214-201ENST00000385214 110 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 RNA5SP163-201ENST00000410304 99 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 MTCYBP6-201ENST00000441810 138 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 MTATP8P1-201ENST00000467115 207 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 AC104692.1-201ENST00000472406 90 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 MIR5706-201ENST00000579841 80 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.21□□□□□ -2.44
CPSF4O95639 AC098479.1-201ENST00000609225 154 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 U6.104-201ENST00000637979 90 ntBASIC-0.21□□□□□ -2.44
CPSF4O95639 Y_RNA.52-201ENST00000362760 96 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 SNORD114-10-201ENST00000363409 72 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 RNA5SP403-201ENST00000363598 108 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 RNU6-493P-201ENST00000391321 108 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 IGLVI-20-201ENST00000519296 130 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 MIR548H5-201ENST00000580314 60 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 U7.6-201ENST00000610841 64 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 MIR2909-201ENST00000617113 69 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 AC067863.3-201ENST00000624172 122 ntBASIC-0.22□□□□□ -2.44
CPSF4O95639 RNU6-867P-201ENST00000364956 107 ntBASIC-0.23□□□□□ -2.45
CPSF4O95639 Y_RNA.466-201ENST00000384294 113 ntBASIC-0.23□□□□□ -2.45
CPSF4O95639 RNU6-472P-201ENST00000384299 107 ntBASIC-0.23□□□□□ -2.45
CPSF4O95639 Y_RNA.531-201ENST00000384589 121 ntBASIC-0.23□□□□□ -2.45
CPSF4O95639 MIR4677-201ENST00000584153 80 ntBASIC-0.23□□□□□ -2.45
CPSF4O95639 MIR3925-201ENST00000584674 77 ntBASIC-0.23□□□□□ -2.45
CPSF4O95639 uc_338.28-201ENST00000612082 187 ntBASIC-0.23□□□□□ -2.45
CPSF4O95639 MIR6779-201ENST00000617283 64 ntBASIC-0.23□□□□□ -2.45
CPSF4O95639 RNA5SP257-201ENST00000363023 116 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 SNORD114-31-201ENST00000363219 75 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 RNU6-429P-201ENST00000384582 108 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 SNORD41.1-201ENST00000391000 69 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 RNA5SP236-201ENST00000516169 116 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 RNU2-35P-201ENST00000516446 142 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 MIR7111-201ENST00000619751 72 ntBASIC-0.24□□□□□ -2.45
CPSF4O95639 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 RNU6-690P-201ENST00000365242 106 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 RNY4P28-201ENST00000365281 93 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.25□□□□□ -2.45
CPSF4O95639 MIR1270-201ENST00000459320 83 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 TRAJ51-201ENST00000504127 63 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 RNA5SP285-201ENST00000516619 119 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 RNU6-180P-201ENST00000516697 61 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 MIR4308-201ENST00000580634 81 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 RNU7-10P-201ENST00000607194 63 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 AC073869.9-201ENST00000641610 120 ntBASIC-0.25□□□□□ -2.45
CPSF4O95639 RNU6-449P-201ENST00000383914 107 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms