Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 SNORD89-201ENST00000390981 114 ntBASIC1.07□□□□□ -2.24
SNX2O60749 MIR1827-201ENST00000408549 66 ntBASIC1.07□□□□□ -2.24
SNX2O60749 AC008267.6-201ENST00000441664 139 ntBASIC1.07□□□□□ -2.24
SNX2O60749 SNORD33.1-201ENST00000516213 88 ntBASIC1.07□□□□□ -2.24
SNX2O60749 MIR4676-201ENST00000583078 72 ntBASIC1.07□□□□□ -2.24
SNX2O60749 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.07□□□□□ -2.24
SNX2O60749 MIR1-1-201ENST00000362147 71 ntBASIC1.06□□□□□ -2.24
SNX2O60749 Y_RNA.226-201ENST00000364337 114 ntBASIC1.06□□□□□ -2.24
SNX2O60749 Y_RNA.346-201ENST00000365385 112 ntBASIC1.06□□□□□ -2.24
SNX2O60749 MIR499A-201ENST00000384903 122 ntBASIC1.06□□□□□ -2.24
SNX2O60749 MIR100-201ENST00000385259 80 ntBASIC1.06□□□□□ -2.24
SNX2O60749 MIR1287-201ENST00000408492 90 ntBASIC1.06□□□□□ -2.24
SNX2O60749 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.06□□□□□ -2.24
SNX2O60749 MIR1276-201ENST00000408707 83 ntBASIC1.06□□□□□ -2.24
SNX2O60749 RNU7-137P-201ENST00000516788 62 ntBASIC1.06□□□□□ -2.24
SNX2O60749 MIR3163-201ENST00000581592 73 ntBASIC1.06□□□□□ -2.24
SNX2O60749 Y_RNA.773-201ENST00000607168 90 ntBASIC1.06□□□□□ -2.24
SNX2O60749 AC105081.1-201ENST00000617727 106 ntBASIC1.06□□□□□ -2.24
SNX2O60749 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.06□□□□□ -2.24
SNX2O60749 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SNX2O60749 RNU6-1187P-201ENST00000364771 110 ntBASIC1.05□□□□□ -2.24
SNX2O60749 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SNX2O60749 RNU6-1168P-201ENST00000390831 104 ntBASIC1.05□□□□□ -2.24
SNX2O60749 SNORD93-201ENST00000408813 74 ntBASIC1.05□□□□□ -2.24
SNX2O60749 AC067940.1-201ENST00000458411 300 ntBASIC1.05□□□□□ -2.24
SNX2O60749 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.05□□□□□ -2.24
SNX2O60749 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.05□□□□□ -2.24
SNX2O60749 MIR96-201ENST00000362288 78 ntBASIC1.04□□□□□ -2.24
SNX2O60749 MIR759-201ENST00000390224 91 ntBASIC1.04□□□□□ -2.24
SNX2O60749 RNU6-1307P-201ENST00000391012 103 ntBASIC1.04□□□□□ -2.24
SNX2O60749 SNORD77B-201ENST00000391112 67 ntBASIC1.04□□□□□ -2.24
SNX2O60749 MIR1257-201ENST00000408490 117 ntBASIC1.04□□□□□ -2.24
SNX2O60749 RPL39P25-201ENST00000449384 154 ntBASIC1.04□□□□□ -2.24
SNX2O60749 RNU6-62P-201ENST00000516526 102 ntBASIC1.04□□□□□ -2.24
SNX2O60749 MIR4804-201ENST00000581683 73 ntBASIC1.04□□□□□ -2.24
SNX2O60749 AC211469.2-201ENST00000605461 205 ntBASIC1.04□□□□□ -2.24
SNX2O60749 SNORD114-21-201ENST00000606412 72 ntBASIC1.04□□□□□ -2.24
SNX2O60749 MIR6504-201ENST00000613520 61 ntBASIC1.04□□□□□ -2.24
SNX2O60749 Y_RNA.344-201ENST00000365381 112 ntBASIC1.03□□□□□ -2.24
SNX2O60749 Y_RNA.353-201ENST00000365440 108 ntBASIC1.03□□□□□ -2.24
SNX2O60749 MIR548D2-201ENST00000384955 97 ntBASIC1.03□□□□□ -2.24
SNX2O60749 MIR125B2-201ENST00000385128 89 ntBASIC1.03□□□□□ -2.24
SNX2O60749 RNU6-1154P-201ENST00000391001 104 ntBASIC1.03□□□□□ -2.24
SNX2O60749 Y_RNA.588-201ENST00000391254 102 ntBASIC1.03□□□□□ -2.24
SNX2O60749 Y_RNA.649-201ENST00000459077 103 ntBASIC1.03□□□□□ -2.24
SNX2O60749 U7.7-201ENST00000459276 60 ntBASIC1.03□□□□□ -2.24
SNX2O60749 RNA5SP255-201ENST00000516370 107 ntBASIC1.03□□□□□ -2.24
SNX2O60749 RNU6-977P-201ENST00000516411 103 ntBASIC1.03□□□□□ -2.24
SNX2O60749 FAM71BP1-201ENST00000604431 523 ntBASIC1.03□□□□□ -2.24
SNX2O60749 MIR1255B1-201ENST00000636325 63 ntBASIC1.03□□□□□ -2.24
SNX2O60749 U2.22-201ENST00000636441 106 ntBASIC1.03□□□□□ -2.24
SNX2O60749 Y_RNA.224-201ENST00000364308 111 ntBASIC1.02□□□□□ -2.25
SNX2O60749 Y_RNA.563-201ENST00000384707 108 ntBASIC1.02□□□□□ -2.25
SNX2O60749 MIR206-201ENST00000384872 86 ntBASIC1.02□□□□□ -2.25
SNX2O60749 MIR548A1-201ENST00000385041 97 ntBASIC1.02□□□□□ -2.25
SNX2O60749 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.02□□□□□ -2.25
SNX2O60749 RNU6-1110P-201ENST00000516462 101 ntBASIC1.02□□□□□ -2.25
SNX2O60749 MIR4491-201ENST00000581087 68 ntBASIC1.02□□□□□ -2.25
SNX2O60749 U6.95-201ENST00000636931 70 ntBASIC1.02□□□□□ -2.25
SNX2O60749 SNORD115-19-201ENST00000363098 82 ntBASIC1.01□□□□□ -2.25
SNX2O60749 SNORD115-18-201ENST00000363293 82 ntBASIC1.01□□□□□ -2.25
SNX2O60749 SNORD114-10-201ENST00000363409 72 ntBASIC1.01□□□□□ -2.25
SNX2O60749 Y_RNA.191-201ENST00000363972 113 ntBASIC1.01□□□□□ -2.25
SNX2O60749 SNORD115-17-201ENST00000364612 82 ntBASIC1.01□□□□□ -2.25
SNX2O60749 RNA5SP205-201ENST00000364653 136 ntBASIC1.01□□□□□ -2.25
SNX2O60749 SNORD114-22-201ENST00000365423 72 ntBASIC1.01□□□□□ -2.25
SNX2O60749 RNU7-56P-201ENST00000458744 62 ntBASIC1.01□□□□□ -2.25
SNX2O60749 RPL39P28-201ENST00000465655 155 ntBASIC1.01□□□□□ -2.25
SNX2O60749 RNU6-479P-201ENST00000516348 105 ntBASIC1.01□□□□□ -2.25
SNX2O60749 RNU7-156P-201ENST00000517214 74 ntBASIC1.01□□□□□ -2.25
SNX2O60749 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
SNX2O60749 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
SNX2O60749 RMST_2.1-201ENST00000617263 136 ntBASIC1.01□□□□□ -2.25
SNX2O60749 MIR8066-201ENST00000617280 78 ntBASIC1.01□□□□□ -2.25
SNX2O60749 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.01□□□□□ -2.25
SNX2O60749 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
SNX2O60749 RNY4P6-201ENST00000363667 96 ntBASIC1□□□□□ -2.25
SNX2O60749 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
SNX2O60749 MIR520F-201ENST00000384824 87 ntBASIC1□□□□□ -2.25
SNX2O60749 MIR548A3-201ENST00000385297 97 ntBASIC1□□□□□ -2.25
SNX2O60749 RNU6-1321P-201ENST00000390905 107 ntBASIC1□□□□□ -2.25
SNX2O60749 RNU4-83P-201ENST00000410863 133 ntBASIC1□□□□□ -2.25
SNX2O60749 AC025627.3-201ENST00000582078 182 ntBASIC1□□□□□ -2.25
SNX2O60749 RNU6-403P-201ENST00000363163 104 ntBASIC0.99□□□□□ -2.25
SNX2O60749 Y_RNA.362-201ENST00000365518 110 ntBASIC0.99□□□□□ -2.25
SNX2O60749 Y_RNA.448-201ENST00000384185 108 ntBASIC0.99□□□□□ -2.25
SNX2O60749 Y_RNA.549-201ENST00000384657 102 ntBASIC0.99□□□□□ -2.25
SNX2O60749 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
SNX2O60749 MIR938-201ENST00000401216 83 ntBASIC0.99□□□□□ -2.25
SNX2O60749 RNU7-2P-201ENST00000516096 62 ntBASIC0.99□□□□□ -2.25
SNX2O60749 ACA64.5-201ENST00000516207 127 ntBASIC0.99□□□□□ -2.25
SNX2O60749 SNORA25.16-201ENST00000516741 121 ntBASIC0.99□□□□□ -2.25
SNX2O60749 MIR4452-201ENST00000583004 71 ntBASIC0.99□□□□□ -2.25
SNX2O60749 AL136317.1-201ENST00000612653 226 ntBASIC0.99□□□□□ -2.25
SNX2O60749 AL035470.1-201ENST00000622571 220 ntBASIC0.99□□□□□ -2.25
SNX2O60749 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
SNX2O60749 Y_RNA.13-201ENST00000362403 112 ntBASIC0.98□□□□□ -2.25
SNX2O60749 SNORD115-35-201ENST00000365122 82 ntBASIC0.98□□□□□ -2.25
SNX2O60749 SNORD105-201ENST00000386910 85 ntBASIC0.98□□□□□ -2.25
SNX2O60749 RNU2-51P-201ENST00000410708 197 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 250.3 ms