Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 MIR21-201ENST00000362134 72 ntBASIC2.76□□□□□ -1.97
ACTN4O43707 SNORA25.3-201ENST00000363205 127 ntBASIC2.76□□□□□ -1.97
ACTN4O43707 Y_RNA.500-201ENST00000384466 111 ntBASIC2.76□□□□□ -1.97
ACTN4O43707 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
ACTN4O43707 MIR4319-201ENST00000577285 85 ntBASIC2.76□□□□□ -1.97
ACTN4O43707 RNA5SP393-201ENST00000363423 117 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 SNORD41-201ENST00000386967 70 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 RNA5SP181-201ENST00000410246 98 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.75□□□□□ -1.97
ACTN4O43707 SUMO1P4-201ENST00000429430 302 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 snoU13.17-201ENST00000458802 104 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 RNA5SP356-201ENST00000515972 94 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 RNU6-1194P-201ENST00000516208 104 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 MIR2115-201ENST00000516657 100 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 SNORA25.16-201ENST00000516741 121 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 RNU6-922P-201ENST00000516753 99 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 AL137847.3-201ENST00000611521 109 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.75□□□□□ -1.97
ACTN4O43707 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
ACTN4O43707 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
ACTN4O43707 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
ACTN4O43707 Y_RNA.36-201ENST00000362602 112 ntBASIC2.74□□□□□ -1.97
ACTN4O43707 SNORD115-31-201ENST00000365318 82 ntBASIC2.74□□□□□ -1.97
ACTN4O43707 MIR513A1-201ENST00000385138 129 ntBASIC2.74□□□□□ -1.97
ACTN4O43707 MIR4491-201ENST00000581087 68 ntBASIC2.74□□□□□ -1.97
ACTN4O43707 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.74□□□□□ -1.97
ACTN4O43707 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
ACTN4O43707 SNORA5B-201ENST00000363786 132 ntBASIC2.73□□□□□ -1.97
ACTN4O43707 RNU6-1051P-201ENST00000365471 102 ntBASIC2.73□□□□□ -1.97
ACTN4O43707 RNU6-471P-201ENST00000383944 106 ntBASIC2.73□□□□□ -1.97
ACTN4O43707 U4.3-201ENST00000621047 82 ntBASIC2.73□□□□□ -1.97
ACTN4O43707 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.73□□□□□ -1.97
ACTN4O43707 AC016717.2-201ENST00000609089 5141 ntBASIC2.72□□□□□ -1.97
ACTN4O43707 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ACTN4O43707 RNY4P3-201ENST00000365254 95 ntBASIC2.72□□□□□ -1.97
ACTN4O43707 MT-TN-201ENST00000387400 73 ntBASIC2.72□□□□□ -1.97
ACTN4O43707 MIR942-201ENST00000401111 86 ntBASIC2.72□□□□□ -1.97
ACTN4O43707 SNORD93-201ENST00000408813 74 ntBASIC2.72□□□□□ -1.97
ACTN4O43707 RNA5SP450-201ENST00000411206 102 ntBASIC2.72□□□□□ -1.97
ACTN4O43707 RNU7-156P-201ENST00000517214 74 ntBASIC2.72□□□□□ -1.97
ACTN4O43707 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ACTN4O43707 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.71□□□□□ -1.98
ACTN4O43707 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ACTN4O43707 Y_RNA.42-201ENST00000362660 108 ntBASIC2.71□□□□□ -1.98
ACTN4O43707 RNU6-330P-201ENST00000363015 107 ntBASIC2.71□□□□□ -1.98
ACTN4O43707 Y_RNA.371-201ENST00000365591 113 ntBASIC2.71□□□□□ -1.98
ACTN4O43707 AL359511.1-201ENST00000402970 211 ntBASIC2.71□□□□□ -1.98
ACTN4O43707 AC093423.1-201ENST00000440817 142 ntBASIC2.71□□□□□ -1.98
ACTN4O43707 RPL30P7-201ENST00000479312 323 ntBASIC2.71□□□□□ -1.98
ACTN4O43707 uc_338.6-201ENST00000613544 171 ntBASIC2.71□□□□□ -1.98
ACTN4O43707 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
ACTN4O43707 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
ACTN4O43707 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.7□□□□□ -1.98
ACTN4O43707 Y_RNA.207-201ENST00000364142 106 ntBASIC2.7□□□□□ -1.98
ACTN4O43707 Y_RNA.239-201ENST00000364444 113 ntBASIC2.7□□□□□ -1.98
ACTN4O43707 RNU6-154P-201ENST00000384306 106 ntBASIC2.7□□□□□ -1.98
ACTN4O43707 Y_RNA.510-201ENST00000384511 114 ntBASIC2.7□□□□□ -1.98
ACTN4O43707 RN7SL274P-201ENST00000492268 272 ntBASIC2.7□□□□□ -1.98
ACTN4O43707 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.7□□□□□ -1.98
ACTN4O43707 MIR5194-201ENST00000582634 120 ntBASIC2.7□□□□□ -1.98
ACTN4O43707 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
ACTN4O43707 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
ACTN4O43707 MIR101-2-201ENST00000362195 79 ntBASIC2.69□□□□□ -1.98
ACTN4O43707 RNU6-403P-201ENST00000363163 104 ntBASIC2.69□□□□□ -1.98
ACTN4O43707 SNORD100-201ENST00000408573 76 ntBASIC2.69□□□□□ -1.98
ACTN4O43707 RNU7-195P-201ENST00000458793 62 ntBASIC2.69□□□□□ -1.98
ACTN4O43707 MIR6817-201ENST00000615588 66 ntBASIC2.69□□□□□ -1.98
ACTN4O43707 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
ACTN4O43707 RNA5SP68-201ENST00000363885 119 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 RNU6-340P-201ENST00000364005 107 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 Y_RNA.536-201ENST00000384621 113 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 Y_RNA.588-201ENST00000391254 102 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 RNA5SP184-201ENST00000411071 108 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 RNA5SP148-201ENST00000516527 94 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 SNORA31.11-201ENST00000516528 139 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 RNA5SP402-201ENST00000517148 110 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 TRDV1-202ENST00000621643 102 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 MIR1291-201ENST00000627649 87 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 ZNF209P-201ENST00000593450 2304 ntBASIC2.68□□□□□ -1.98
ACTN4O43707 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
ACTN4O43707 RNU4-82P-201ENST00000362443 140 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 RNU6-291P-201ENST00000384720 107 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 MIR196B-201ENST00000384852 84 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 MTND4LP19-201ENST00000403051 166 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 AL161935.2-201ENST00000414627 60 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 RPS27P16-201ENST00000425758 201 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.67□□□□□ -1.98
ACTN4O43707 TRAJ51-201ENST00000504127 63 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 AC026436.1-201ENST00000510537 270 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 RNU6-947P-201ENST00000516264 106 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 RNU11-2P-201ENST00000516898 142 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 MIR4529-201ENST00000578110 78 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 RNU7-10P-201ENST00000607194 63 ntBASIC2.67□□□□□ -1.98
ACTN4O43707 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
ACTN4O43707 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
ACTN4O43707 RNU6-681P-201ENST00000364012 104 ntBASIC2.66□□□□□ -1.98
ACTN4O43707 MIR548H5-201ENST00000580314 60 ntBASIC2.66□□□□□ -1.98
ACTN4O43707 MIR6516-201ENST00000630554 81 ntBASIC2.66□□□□□ -1.98
ACTN4O43707 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
ACTN4O43707 RNU1-36P-201ENST00000365130 165 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms