Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 RNU7-137P-201ENST00000516788 62 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 SNORA20.3-201ENST00000516880 132 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 YWHAEP2-201ENST00000580066 112 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 AC113139.1-201ENST00000605049 239 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-1.01□□□□□ -2.57
SGCEO43556 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.02□□□□□ -2.57
SGCEO43556 SNORD116-2-201ENST00000384274 95 ntBASIC-1.02□□□□□ -2.57
SGCEO43556 SNORD116-6-201ENST00000384711 96 ntBASIC-1.02□□□□□ -2.57
SGCEO43556 MTND5P18-201ENST00000445624 1801 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 RNU6-502P-201ENST00000362419 108 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 RNU4-90P-201ENST00000362773 141 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 RNU6-154P-201ENST00000384306 106 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 RNU6-901P-201ENST00000384593 106 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 MIR517B-201ENST00000385102 67 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 MIR519A1-201ENST00000385257 85 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 RNU6-718P-201ENST00000516166 105 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 MIR3129-201ENST00000581095 76 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 AL606534.2-204ENST00000635008 178 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 MIR4320-201ENST00000636981 65 ntBASIC-1.03□□□□□ -2.57
SGCEO43556 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 MIR519E-201ENST00000385075 84 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.04□□□□□ -2.58
SGCEO43556 SNORA53-201ENST00000391141 249 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 AL731563.1-201ENST00000442202 214 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 MIR548AG2-201ENST00000581228 64 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 AL359881.1-201ENST00000602916 267 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 MIR382-201ENST00000637119 76 ntBASIC-1.04□□□□□ -2.58
SGCEO43556 RNU6-226P-201ENST00000363778 107 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 RNU1-115P-201ENST00000365329 160 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.05□□□□□ -2.58
SGCEO43556 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.05□□□□□ -2.58
SGCEO43556 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.05□□□□□ -2.58
SGCEO43556 SNRPGP8-201ENST00000454064 226 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 HSPE1P25-201ENST00000455484 251 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 SNORD67.1-201ENST00000516618 108 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 AC011603.4-201ENST00000611325 277 ntBASIC-1.05□□□□□ -2.58
SGCEO43556 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 SNORD114-10-201ENST00000363409 72 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 RNU4-10P-201ENST00000364383 140 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 MIR617-201ENST00000385030 97 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 MIR548F1-201ENST00000408667 84 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 RNU7-55P-201ENST00000459426 62 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 AC069439.1-201ENST00000494739 167 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 AP000676.1-201ENST00000533307 52 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 MIR3179-1-201ENST00000578940 84 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 MIR3179-2-201ENST00000579107 84 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 MIR3179-3-201ENST00000579566 84 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 MIR3179-4-201ENST00000617599 84 ntBASIC-1.06□□□□□ -2.58
SGCEO43556 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.07□□□□□ -2.58
SGCEO43556 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.07□□□□□ -2.58
SGCEO43556 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.07□□□□□ -2.58
SGCEO43556 MIR8485-201ENST00000401372 91 ntBASIC-1.07□□□□□ -2.58
SGCEO43556 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.07□□□□□ -2.58
SGCEO43556 RNU6-130P-201ENST00000411112 103 ntBASIC-1.07□□□□□ -2.58
SGCEO43556 PART1_1.1-201ENST00000611761 217 ntBASIC-1.07□□□□□ -2.58
SGCEO43556 MIR376A1-201ENST00000616574 68 ntBASIC-1.07□□□□□ -2.58
SGCEO43556 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.07□□□□□ -2.58
SGCEO43556 MIR20A-201ENST00000362279 71 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 SNORD115-20-201ENST00000365099 82 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 Y_RNA.622-201ENST00000411091 108 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 SNORD22.1-201ENST00000516331 125 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 RNU6-706P-201ENST00000517229 104 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 AC037487.3-201ENST00000606668 112 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 AC145423.2-201ENST00000610631 239 ntBASIC-1.08□□□□□ -2.58
SGCEO43556 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 RNU6-102P-201ENST00000384485 104 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 MIR548I2-201ENST00000408348 149 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 RNU7-195P-201ENST00000458793 62 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 snoU13.13-201ENST00000458842 104 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 RNU7-134P-201ENST00000458997 64 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 MIR4460-201ENST00000577862 86 ntBASIC-1.09□□□□□ -2.58
SGCEO43556 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 SNORD81.2-201ENST00000365153 76 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.1□□□□□ -2.59
SGCEO43556 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms