Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MTND5P34-201ENST00000568888 325 ntBASIC0.49□□□□□ -2.33
TRIM49D1C9J1S8 AC021443.1-201ENST00000604478 211 ntBASIC0.49□□□□□ -2.33
TRIM49D1C9J1S8 RNU6-403P-201ENST00000363163 104 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 RNA5SP499-201ENST00000363982 119 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 RNU6-915P-201ENST00000364943 103 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 Y_RNA.420-201ENST00000384043 110 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 Y_RNA.525-201ENST00000384570 113 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 RNA5SP237-201ENST00000410414 113 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 RNU6-735P-201ENST00000410612 107 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 SNORD67.1-201ENST00000516618 108 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 RNY4P20-201ENST00000516678 93 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 RNA5SP33-201ENST00000516687 98 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 MIR4491-201ENST00000581087 68 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 MIR4305-201ENST00000583252 102 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.48□□□□□ -2.33
TRIM49D1C9J1S8 MIR18A-201ENST00000362310 71 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 Y_RNA.32-201ENST00000362589 110 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 Y_RNA.270-201ENST00000364693 104 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 SNORA72.6-201ENST00000384520 129 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 Y_RNA.540-201ENST00000384638 111 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 MIR938-201ENST00000401216 83 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 RNU4-83P-201ENST00000410863 133 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 RNU6-1086P-201ENST00000410930 100 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 AC108059.2-201ENST00000434626 151 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 MIR18B-201ENST00000454574 71 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 RNU7-164P-201ENST00000459221 62 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 RNU7-113P-201ENST00000459273 62 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 MIR3671-201ENST00000580455 88 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 SNORD92-201ENST00000585078 85 ntBASIC0.47□□□□□ -2.33
TRIM49D1C9J1S8 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-449P-201ENST00000383914 107 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-364P-201ENST00000384387 107 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 MIR644A-201ENST00000385262 94 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 MT-TF-201ENST00000387314 71 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 MIR936-201ENST00000401264 98 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 AC098934.3-201ENST00000430450 190 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 AC092628.1-201ENST00000436250 252 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 RNU7-79P-201ENST00000516082 62 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-781P-201ENST00000516377 101 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.700-201ENST00000516806 100 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-182P-201ENST00000516970 105 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 RNU7-35P-201ENST00000517174 62 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 AC133485.4-201ENST00000561835 220 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 AC138907.4-201ENST00000570107 226 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 MIR3646-201ENST00000578301 84 ntBASIC0.46□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-774P-201ENST00000363238 107 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 SNORA63.5-201ENST00000363548 123 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 RNA5SP245-201ENST00000364239 121 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.298-201ENST00000364960 107 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-949P-201ENST00000384040 107 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.506-201ENST00000384494 102 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.531-201ENST00000384589 121 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 RNA5SP121-201ENST00000516537 101 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 RNU7-137P-201ENST00000516788 62 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-794P-201ENST00000517261 64 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 AC090897.1-201ENST00000580909 226 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 U6.109-201ENST00000636749 87 ntBASIC0.45□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-235P-201ENST00000362644 107 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.215-201ENST00000364204 112 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.580-201ENST00000391004 95 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 RNA5SP193-201ENST00000410353 107 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 AC002350.1-201ENST00000490759 375 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 SNORA68.3-201ENST00000515906 83 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-531P-201ENST00000516694 104 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 AC138749.4-201ENST00000563970 127 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 MIR3152-201ENST00000579801 74 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 MIR6082-201ENST00000613604 109 ntBASIC0.44□□□□□ -2.34
TRIM49D1C9J1S8 RNA5SP133-201ENST00000363368 119 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 SNORA36.1-201ENST00000363424 132 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 SNORD18A-201ENST00000363753 72 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-291P-201ENST00000384720 107 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 MIR613-201ENST00000385248 95 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-679P-201ENST00000391003 106 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 AL022718.1-201ENST00000412004 84 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 RNU7-200P-201ENST00000516105 62 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 SNORA31.14-201ENST00000516728 116 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 MIR4711-201ENST00000578274 70 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 SNORA25.18-201ENST00000607153 114 ntBASIC0.43□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.114-201ENST00000363265 113 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.280-201ENST00000364765 112 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 RNY1P2-201ENST00000364820 117 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 MIR140-201ENST00000385282 100 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 RNU6-1321P-201ENST00000390905 107 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 AC114737.2-201ENST00000421583 173 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 MIR3121-201ENST00000579680 77 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 AC025627.3-201ENST00000582078 182 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 Y_RNA.773-201ENST00000607168 90 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 AL137067.1-201ENST00000615933 120 ntBASIC0.42□□□□□ -2.34
TRIM49D1C9J1S8 SNORD115-2-201ENST00000362842 82 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 RNA5SP517-201ENST00000364724 117 ntBASIC0.41□□□□□ -2.34
TRIM49D1C9J1S8 SNORD115-20-201ENST00000365099 82 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms