Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU6-476P-201ENST00000384726 107 ntBASIC1.45□□□□□ -2.18
CCDC163A0A0D9SF12 MIR548D2-201ENST00000384955 97 ntBASIC1.45□□□□□ -2.18
CCDC163A0A0D9SF12 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.45□□□□□ -2.18
CCDC163A0A0D9SF12 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
CCDC163A0A0D9SF12 AC067940.1-201ENST00000458411 300 ntBASIC1.45□□□□□ -2.18
CCDC163A0A0D9SF12 MIR1270-201ENST00000459320 83 ntBASIC1.45□□□□□ -2.18
CCDC163A0A0D9SF12 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.45□□□□□ -2.18
CCDC163A0A0D9SF12 AC027335.2-201ENST00000624030 375 ntBASIC1.45□□□□□ -2.18
CCDC163A0A0D9SF12 MIR30D-201ENST00000362283 70 ntBASIC1.44□□□□□ -2.18
CCDC163A0A0D9SF12 Y_RNA.540-201ENST00000384638 111 ntBASIC1.44□□□□□ -2.18
CCDC163A0A0D9SF12 MIR563-201ENST00000385080 79 ntBASIC1.44□□□□□ -2.18
CCDC163A0A0D9SF12 SNORD93-201ENST00000408813 74 ntBASIC1.44□□□□□ -2.18
CCDC163A0A0D9SF12 MIR18B-201ENST00000454574 71 ntBASIC1.44□□□□□ -2.18
CCDC163A0A0D9SF12 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.44□□□□□ -2.18
CCDC163A0A0D9SF12 Y_RNA.773-201ENST00000607168 90 ntBASIC1.44□□□□□ -2.18
CCDC163A0A0D9SF12 MIR6129-201ENST00000616087 109 ntBASIC1.44□□□□□ -2.18
CCDC163A0A0D9SF12 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.44□□□□□ -2.18
CCDC163A0A0D9SF12 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC163A0A0D9SF12 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
CCDC163A0A0D9SF12 RNU6-53P-201ENST00000365367 106 ntBASIC1.43□□□□□ -2.18
CCDC163A0A0D9SF12 MIR100-201ENST00000385259 80 ntBASIC1.43□□□□□ -2.18
CCDC163A0A0D9SF12 RMST_2.1-201ENST00000617263 136 ntBASIC1.43□□□□□ -2.18
CCDC163A0A0D9SF12 Y_RNA.344-201ENST00000365381 112 ntBASIC1.42□□□□□ -2.18
CCDC163A0A0D9SF12 RNU6-949P-201ENST00000384040 107 ntBASIC1.42□□□□□ -2.18
CCDC163A0A0D9SF12 RNU6-1144P-201ENST00000384247 104 ntBASIC1.42□□□□□ -2.18
CCDC163A0A0D9SF12 Y_RNA.549-201ENST00000384657 102 ntBASIC1.42□□□□□ -2.18
CCDC163A0A0D9SF12 MT-TF-201ENST00000387314 71 ntBASIC1.42□□□□□ -2.18
CCDC163A0A0D9SF12 MIR942-201ENST00000401111 86 ntBASIC1.42□□□□□ -2.18
CCDC163A0A0D9SF12 MIR1304-201ENST00000408243 91 ntBASIC1.42□□□□□ -2.18
CCDC163A0A0D9SF12 AL078603.1-201ENST00000603824 313 ntBASIC1.42□□□□□ -2.18
CCDC163A0A0D9SF12 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 MIR1-1-201ENST00000362147 71 ntBASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 Y_RNA.35-201ENST00000362601 101 ntBASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 SNORD114-22-201ENST00000365423 72 ntBASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 Y_RNA.362-201ENST00000365518 110 ntBASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 U8.15-201ENST00000390947 134 ntBASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 RPS29P28-201ENST00000446439 141 ntBASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 SNORD124-201ENST00000459577 104 ntBASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 RNA5SP404-201ENST00000517118 132 ntBASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 MIR1255B1-201ENST00000636325 63 ntBASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
CCDC163A0A0D9SF12 RNU6-403P-201ENST00000363163 104 ntBASIC1.4□□□□□ -2.19
CCDC163A0A0D9SF12 SNORD89-201ENST00000390981 114 ntBASIC1.4□□□□□ -2.19
CCDC163A0A0D9SF12 MIR1257-201ENST00000408490 117 ntBASIC1.4□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.4□□□□□ -2.19
CCDC163A0A0D9SF12 RPS26P5-201ENST00000418544 335 ntBASIC1.4□□□□□ -2.19
CCDC163A0A0D9SF12 RNU7-185P-201ENST00000459215 60 ntBASIC1.4□□□□□ -2.19
CCDC163A0A0D9SF12 AC133485.1-201ENST00000567176 124 ntBASIC1.4□□□□□ -2.19
CCDC163A0A0D9SF12 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.4□□□□□ -2.19
CCDC163A0A0D9SF12 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CCDC163A0A0D9SF12 Y_RNA.155-201ENST00000363632 101 ntBASIC1.39□□□□□ -2.19
CCDC163A0A0D9SF12 Y_RNA.273-201ENST00000364703 102 ntBASIC1.39□□□□□ -2.19
CCDC163A0A0D9SF12 MIR206-201ENST00000384872 86 ntBASIC1.39□□□□□ -2.19
CCDC163A0A0D9SF12 SNORA7.5-201ENST00000410672 110 ntBASIC1.39□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-977P-201ENST00000516411 103 ntBASIC1.39□□□□□ -2.19
CCDC163A0A0D9SF12 RNU7-137P-201ENST00000516788 62 ntBASIC1.39□□□□□ -2.19
CCDC163A0A0D9SF12 MIR3660-201ENST00000584845 100 ntBASIC1.39□□□□□ -2.19
CCDC163A0A0D9SF12 AL035470.1-201ENST00000622571 220 ntBASIC1.39□□□□□ -2.19
CCDC163A0A0D9SF12 SNORD114-10-201ENST00000363409 72 ntBASIC1.38□□□□□ -2.19
CCDC163A0A0D9SF12 Y_RNA.448-201ENST00000384185 108 ntBASIC1.38□□□□□ -2.19
CCDC163A0A0D9SF12 SNORA72.6-201ENST00000384520 129 ntBASIC1.38□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-880P-201ENST00000384526 107 ntBASIC1.38□□□□□ -2.19
CCDC163A0A0D9SF12 Y_RNA.629-201ENST00000411368 105 ntBASIC1.38□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-521P-201ENST00000516663 105 ntBASIC1.38□□□□□ -2.19
CCDC163A0A0D9SF12 AC020891.4-201ENST00000605745 93 ntBASIC1.38□□□□□ -2.19
CCDC163A0A0D9SF12 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.38□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-834P-201ENST00000362367 110 ntBASIC1.37□□□□□ -2.19
CCDC163A0A0D9SF12 SNORD115-19-201ENST00000363098 82 ntBASIC1.37□□□□□ -2.19
CCDC163A0A0D9SF12 SNORD115-18-201ENST00000363293 82 ntBASIC1.37□□□□□ -2.19
CCDC163A0A0D9SF12 SNORD115-17-201ENST00000364612 82 ntBASIC1.37□□□□□ -2.19
CCDC163A0A0D9SF12 RNU1-36P-201ENST00000365130 165 ntBASIC1.37□□□□□ -2.19
CCDC163A0A0D9SF12 Y_RNA.507-201ENST00000384500 99 ntBASIC1.37□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-429P-201ENST00000384582 108 ntBASIC1.37□□□□□ -2.19
CCDC163A0A0D9SF12 RNU7-2P-201ENST00000516096 62 ntBASIC1.37□□□□□ -2.19
CCDC163A0A0D9SF12 DEFB131E-201ENST00000532329 154 ntBASIC1.37□□□□□ -2.19
CCDC163A0A0D9SF12 RNU4-67P-201ENST00000364569 141 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 RNU1-93P-201ENST00000364704 169 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-1325P-201ENST00000364905 105 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-364P-201ENST00000384387 107 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-816P-201ENST00000390914 107 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-1268P-201ENST00000391214 107 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-1239P-201ENST00000391310 107 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 RNU4-83P-201ENST00000410863 133 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 AC023790.1-201ENST00000482174 347 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 MIR4676-201ENST00000583078 72 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 MIR6734-201ENST00000621166 68 ntBASIC1.36□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-865P-201ENST00000364772 107 ntBASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 SNORD115-35-201ENST00000365122 82 ntBASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 MIR19B1-201ENST00000384829 87 ntBASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 MIR7-2-201ENST00000384970 110 ntBASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-1321P-201ENST00000390905 107 ntBASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 FABP5P4-201ENST00000437203 171 ntBASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 U6.109-201ENST00000636749 87 ntBASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 AL512310.12-203ENST00000640543 90 ntBASIC1.35□□□□□ -2.19
CCDC163A0A0D9SF12 RNU6-409P-201ENST00000384114 104 ntBASIC1.34□□□□□ -2.19
CCDC163A0A0D9SF12 MIR520F-201ENST00000384824 87 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms