Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.301-201ENST00000364990 103 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-337P-201ENST00000391243 106 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 RPS3AP52-201ENST00000435639 297 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 SNORD11.1-201ENST00000459482 85 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 RNA5SP272-201ENST00000516095 111 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 SCARNA15-202ENST00000516881 127 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 AC005899.2-201ENST00000584353 90 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 AP001362.1-201ENST00000625165 124 ntBASIC-1.78□□□□□ -2.69
TRAV1-2A0A0B4J238 Y_RNA.577-201ENST00000384794 101 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR516A2-201ENST00000384888 90 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR516A1-201ENST00000385033 90 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR526A2-201ENST00000390198 65 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-576P-201ENST00000390854 102 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-908P-201ENST00000410160 94 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 MTND5P5-201ENST00000503764 376 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU7-110P-201ENST00000516891 62 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR5692C2-201ENST00000577959 77 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR5688-201ENST00000580619 83 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 U6.100-201ENST00000636230 99 ntBASIC-1.79□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 RNY3-201ENST00000365484 102 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.404-201ENST00000383978 102 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR216B-201ENST00000390186 82 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.708-201ENST00000516950 96 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 AL353803.5-201ENST00000599815 141 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 TRDV1-202ENST00000621643 102 ntBASIC-1.8□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-593P-201ENST00000364716 112 ntBASIC-1.81□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR206-201ENST00000384872 86 ntBASIC-1.81□□□□□ -2.7
TRAV1-2A0A0B4J238 SNRPGP8-201ENST00000454064 226 ntBASIC-1.81□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.81□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-764P-201ENST00000516396 105 ntBASIC-1.81□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-850P-201ENST00000516934 103 ntBASIC-1.81□□□□□ -2.7
TRAV1-2A0A0B4J238 AC068339.1-201ENST00000526965 141 ntBASIC-1.81□□□□□ -2.7
TRAV1-2A0A0B4J238 SNORA75-201ENST00000384158 137 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-1307P-201ENST00000391012 103 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 AC144568.1-201ENST00000520139 137 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR4790-201ENST00000577799 79 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR4464-201ENST00000580818 92 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 NBR2-204ENST00000587322 63 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 AL365205.2-201ENST00000594586 68 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 AL162413.1-201ENST00000603198 110 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 AL445584.3-201ENST00000617173 78 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 AL627230.5-201ENST00000619807 58 ntBASIC-1.82□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-451P-201ENST00000362921 107 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 SNORD114-4-201ENST00000363962 75 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 RNY4P36-201ENST00000391116 96 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.644-201ENST00000459006 113 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-983P-201ENST00000516004 103 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-911P-201ENST00000516523 104 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 AC009094.1-201ENST00000564443 426 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 YWHAEP3-201ENST00000582767 121 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 AC007485.1-201ENST00000616755 206 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 MIR6502-201ENST00000617296 76 ntBASIC-1.83□□□□□ -2.7
TRAV1-2A0A0B4J238 RNY1P6-201ENST00000384193 109 ntBASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 SNORD63-201ENST00000384262 68 ntBASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 MTND1P34-201ENST00000438556 671 ntBASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 AC019235.1-201ENST00000503847 207 ntBASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-570P-201ENST00000517051 105 ntBASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 AL512360.1-201ENST00000555346 234 ntBASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 AC087741.2-201ENST00000619415 172 ntBASIC-1.84□□□□□ -2.7
TRAV1-2A0A0B4J238 RNU6-208P-201ENST00000362431 107 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-472P-201ENST00000384299 107 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 MIR620-201ENST00000385232 95 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-1228P-201ENST00000391014 107 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 AL161932.1-201ENST00000437408 146 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 MTND3P10-201ENST00000450967 341 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU7-169P-201ENST00000459456 61 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 RN7SKP298-201ENST00000515950 94 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-307P-201ENST00000516743 106 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 RNU6-762P-201ENST00000517107 102 ntBASIC-1.85□□□□□ -2.71
TRAV1-2A0A0B4J238 U2.1-201ENST00000618978 145 ntBASIC-1.85□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms