Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.54□□□□□ -2.16
PCDHB1Q9Y5F3 SNORA32-201ENST00000384072 121 ntBASIC1.54□□□□□ -2.16
PCDHB1Q9Y5F3 MIR1276-201ENST00000408707 83 ntBASIC1.54□□□□□ -2.16
PCDHB1Q9Y5F3 AL031737.1-201ENST00000450125 223 ntBASIC1.54□□□□□ -2.16
PCDHB1Q9Y5F3 AL589743.1-201ENST00000551932 2712 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 RNA5SP264-201ENST00000363115 107 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 RNA5SP363-201ENST00000365072 115 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 MIR517C-201ENST00000385103 95 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 snoU13.25-201ENST00000458945 104 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 RNU1-98P-201ENST00000458992 160 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 AC113410.1-201ENST00000505029 247 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-168P-201ENST00000516189 101 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 RNU6-412P-201ENST00000516434 106 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 MIR4679-2-201ENST00000578358 77 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 MIR3163-201ENST00000581592 73 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 Z97988.1-201ENST00000637697 135 ntBASIC1.53□□□□□ -2.16
PCDHB1Q9Y5F3 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-396P-201ENST00000365369 105 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-342P-201ENST00000384521 104 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-997P-201ENST00000384725 107 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 MIR759-201ENST00000390224 91 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 MIR1323-201ENST00000408090 73 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 RPS3AP1-201ENST00000413190 320 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 AC245047.7-201ENST00000440265 293 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 RNA5SP33-201ENST00000516687 98 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 AC068339.1-201ENST00000526965 141 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 AP003716.2-201ENST00000528260 108 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.52□□□□□ -2.17
PCDHB1Q9Y5F3 SNORA25.3-201ENST00000363205 127 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-756P-201ENST00000383997 107 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-616P-201ENST00000384353 107 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 Y_RNA.495-201ENST00000384435 112 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 SNORD38B-201ENST00000384690 67 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 snoU13.18-201ENST00000459483 104 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-109P-201ENST00000516364 107 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-184P-201ENST00000516514 107 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 MIR2115-201ENST00000516657 100 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 RNU1-92P-201ENST00000517017 135 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 MIR5009-201ENST00000578736 100 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 SNORD38B-202ENST00000625943 69 ntBASIC1.51□□□□□ -2.17
PCDHB1Q9Y5F3 MIR103A2-201ENST00000362154 78 ntBASIC1.5□□□□□ -2.17
PCDHB1Q9Y5F3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.5□□□□□ -2.17
PCDHB1Q9Y5F3 MIR1304-201ENST00000408243 91 ntBASIC1.5□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-602P-201ENST00000411155 105 ntBASIC1.5□□□□□ -2.17
PCDHB1Q9Y5F3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.5□□□□□ -2.17
PCDHB1Q9Y5F3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.5□□□□□ -2.17
PCDHB1Q9Y5F3 MIR4421-201ENST00000578133 69 ntBASIC1.5□□□□□ -2.17
PCDHB1Q9Y5F3 MIR6504-201ENST00000613520 61 ntBASIC1.5□□□□□ -2.17
PCDHB1Q9Y5F3 AL157834.3-201ENST00000615543 103 ntBASIC1.5□□□□□ -2.17
PCDHB1Q9Y5F3 SNORD115-2-201ENST00000362842 82 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 SNORD115-20-201ENST00000365099 82 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 SNORA51.5-201ENST00000384126 131 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 Y_RNA.466-201ENST00000384294 113 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 MIR590-201ENST00000385008 97 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-816P-201ENST00000390914 107 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 RNU4-69P-201ENST00000410677 143 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 AL353813.1-201ENST00000440700 253 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 AC048334.1-201ENST00000477975 159 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 SNORA31.2-201ENST00000516019 134 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-94P-201ENST00000607728 107 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 AL162726.3-218ENST00000636401 95 ntBASIC1.49□□□□□ -2.17
PCDHB1Q9Y5F3 ZNF209P-201ENST00000593450 2304 ntBASIC1.48□□□□□ -2.17
PCDHB1Q9Y5F3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.48□□□□□ -2.17
PCDHB1Q9Y5F3 MIR1302-7-201ENST00000408841 72 ntBASIC1.48□□□□□ -2.17
PCDHB1Q9Y5F3 RPL39P25-201ENST00000449384 154 ntBASIC1.48□□□□□ -2.17
PCDHB1Q9Y5F3 SNORA31.24-201ENST00000517232 57 ntBASIC1.48□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-537P-201ENST00000517277 103 ntBASIC1.48□□□□□ -2.17
PCDHB1Q9Y5F3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.48□□□□□ -2.17
PCDHB1Q9Y5F3 AC141557.1-201ENST00000540982 400 ntBASIC1.48□□□□□ -2.17
PCDHB1Q9Y5F3 SNORA4-201ENST00000584302 138 ntBASIC1.48□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-766P-201ENST00000362478 107 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 SNORD115-19-201ENST00000363098 82 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 SNORD115-18-201ENST00000363293 82 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 SNORD115-17-201ENST00000364612 82 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-32P-201ENST00000383948 107 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-13P-201ENST00000384248 107 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 SNORA18-201ENST00000384416 132 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-12P-201ENST00000384604 107 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-41P-201ENST00000384741 107 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-1237P-201ENST00000384777 107 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 MIR605-201ENST00000385078 83 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 MIR320A-201ENST00000385302 82 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-1307P-201ENST00000391012 103 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 MIR1185-1-201ENST00000408598 86 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 AP000753.3-201ENST00000604083 169 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 AL161722.3-201ENST00000605789 2983 ntBASIC1.47□□□□□ -2.17
PCDHB1Q9Y5F3 RNU6-905P-201ENST00000384434 107 ntBASIC1.46□□□□□ -2.18
PCDHB1Q9Y5F3 MT-TN-201ENST00000387400 73 ntBASIC1.46□□□□□ -2.18
PCDHB1Q9Y5F3 MIR1302-5-201ENST00000408164 150 ntBASIC1.46□□□□□ -2.18
PCDHB1Q9Y5F3 SNORA7.5-201ENST00000410672 110 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms