Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU2-55P-201ENST00000411146 174 ntBASIC-1.46□□□□□ -2.64
VPS29Q9UBQ0 SEPT14P8-201ENST00000508026 178 ntBASIC-1.46□□□□□ -2.64
VPS29Q9UBQ0 AC040926.1-201ENST00000530195 238 ntBASIC-1.46□□□□□ -2.64
VPS29Q9UBQ0 C8orf59P2-201ENST00000603441 271 ntBASIC-1.46□□□□□ -2.64
VPS29Q9UBQ0 AC145423.2-201ENST00000610631 239 ntBASIC-1.46□□□□□ -2.64
VPS29Q9UBQ0 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 SNORD115-25-201ENST00000362619 82 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 RNU6-10P-201ENST00000384036 107 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 Y_RNA.458-201ENST00000384240 102 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 RNU6-310P-201ENST00000384655 107 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 MIR617-201ENST00000385030 97 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 RNU2-16P-201ENST00000410712 136 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 AC099799.1-201ENST00000439809 192 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 AC244090.1-201ENST00000441884 93 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 RNU7-195P-201ENST00000458793 62 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 MRPS35P2-201ENST00000508242 191 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 SNORD67.1-201ENST00000516618 108 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 MIR378F-201ENST00000578143 78 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 MIR3129-201ENST00000581095 76 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 MIR5704-201ENST00000584029 77 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 AL121655.1-201ENST00000605811 308 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 AC133104.2-201ENST00000615272 193 ntBASIC-1.47□□□□□ -2.64
VPS29Q9UBQ0 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 RNU6-524P-201ENST00000384270 107 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 MIR587-201ENST00000384845 96 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 AC016907.1-201ENST00000419483 435 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 MTND1P34-201ENST00000438556 671 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 RN7SKP19-201ENST00000516016 252 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 RNA5SP470-201ENST00000516463 106 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 AC078883.4-201ENST00000623218 367 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 MIR3974-201ENST00000637126 96 ntBASIC-1.48□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 SNORA32-201ENST00000384072 121 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 SNORA49-201ENST00000386157 136 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 SNORD64-201ENST00000386683 67 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 SNORA40.17-201ENST00000517256 115 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 AL359881.1-201ENST00000602916 267 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 AC007485.1-201ENST00000616755 206 ntBASIC-1.49□□□□□ -2.65
VPS29Q9UBQ0 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 SNORD114-10-201ENST00000363409 72 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 RNU6-973P-201ENST00000364690 107 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 RNY4P3-201ENST00000365254 95 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 MIR181A1-201ENST00000385026 110 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 MIR4500-201ENST00000579472 76 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 MIR5688-201ENST00000580619 83 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.5□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 RNU6-431P-201ENST00000383874 107 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 MIR519A1-201ENST00000385257 85 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 MIR652-201ENST00000385278 98 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 MT-TY-201ENST00000387409 66 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 MIR3165-201ENST00000579874 75 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 AC006006.1-201ENST00000603082 144 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 AC093783.1-201ENST00000612976 329 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 U4.1-201ENST00000620349 87 ntBASIC-1.51□□□□□ -2.65
VPS29Q9UBQ0 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 RNU4-14P-201ENST00000410858 122 ntBASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 RNU6-370P-201ENST00000411008 104 ntBASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 SCARNA18B-201ENST00000458806 135 ntBASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 snoU13.11-201ENST00000459219 104 ntBASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 RNU7-113P-201ENST00000459273 62 ntBASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.52□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 RNU4-10P-201ENST00000364383 140 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 RNA5SP192-201ENST00000364404 120 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 SNORD115-35-201ENST00000365122 82 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 SNORD63B-201ENST00000411005 70 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 PMCHL1-202ENST00000423102 261 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 RNU6-507P-201ENST00000516045 100 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 RNA5SP33-201ENST00000516687 98 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 RPS29P30-201ENST00000600975 111 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 MIR4272-201ENST00000635924 64 ntBASIC-1.53□□□□□ -2.65
VPS29Q9UBQ0 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.54□□□□□ -2.66
VPS29Q9UBQ0 SNORA51.5-201ENST00000384126 131 ntBASIC-1.54□□□□□ -2.66
VPS29Q9UBQ0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.54□□□□□ -2.66
VPS29Q9UBQ0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-1.54□□□□□ -2.66
VPS29Q9UBQ0 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.54□□□□□ -2.66
VPS29Q9UBQ0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.54□□□□□ -2.66
VPS29Q9UBQ0 AC006504.6-201ENST00000590142 199 ntBASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 258.1 ms