Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 HMGN1P33-201ENST00000432945 451 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.49□□□□□ -2.17
DKK3Q9UBP4 RNU1-92P-201ENST00000517017 135 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 RNU6-902P-201ENST00000517212 91 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 AP003716.2-201ENST00000528260 108 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 AC022523.2-201ENST00000561045 150 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 MIR7974-201ENST00000615835 79 ntBASIC1.49□□□□□ -2.17
DKK3Q9UBP4 Y_RNA.35-201ENST00000362601 101 ntBASIC1.48□□□□□ -2.17
DKK3Q9UBP4 Y_RNA.171-201ENST00000363760 102 ntBASIC1.48□□□□□ -2.17
DKK3Q9UBP4 MTATP6P29-201ENST00000415057 132 ntBASIC1.48□□□□□ -2.17
DKK3Q9UBP4 snoU13.25-201ENST00000458945 104 ntBASIC1.48□□□□□ -2.17
DKK3Q9UBP4 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
DKK3Q9UBP4 MIR8065-201ENST00000620577 100 ntBASIC1.48□□□□□ -2.17
DKK3Q9UBP4 SNORD38B-201ENST00000384690 67 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 MIR598-201ENST00000384868 97 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 MIR548D2-201ENST00000384955 97 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 MIR1302-7-201ENST00000408841 72 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 RNU4-69P-201ENST00000410677 143 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 AL354695.1-201ENST00000427935 228 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 RNU6-412P-201ENST00000516434 106 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 RNU11-2P-201ENST00000516898 142 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 AL512310.8-201ENST00000550183 120 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 CYP3A52P-201ENST00000563326 91 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 PRELID3BP2-201ENST00000605362 201 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 SNORD38B-202ENST00000625943 69 ntBASIC1.47□□□□□ -2.17
DKK3Q9UBP4 RNU6-755P-201ENST00000364400 103 ntBASIC1.46□□□□□ -2.18
DKK3Q9UBP4 SNORD26-201ENST00000384147 75 ntBASIC1.46□□□□□ -2.18
DKK3Q9UBP4 RNU6-939P-201ENST00000384634 107 ntBASIC1.46□□□□□ -2.18
DKK3Q9UBP4 AC090844.1-201ENST00000422019 156 ntBASIC1.46□□□□□ -2.18
DKK3Q9UBP4 AC023790.1-201ENST00000482174 347 ntBASIC1.46□□□□□ -2.18
DKK3Q9UBP4 RNU6-165P-201ENST00000517170 99 ntBASIC1.46□□□□□ -2.18
DKK3Q9UBP4 AC019176.1-201ENST00000518519 225 ntBASIC1.46□□□□□ -2.18
DKK3Q9UBP4 ZNF209P-201ENST00000593450 2304 ntBASIC1.46□□□□□ -2.18
DKK3Q9UBP4 RNU6-44P-201ENST00000384045 107 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 Y_RNA.470-201ENST00000384307 117 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
DKK3Q9UBP4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 RPL39P34-201ENST00000477141 156 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 RNA5SP33-201ENST00000516687 98 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 RNU7-6P-201ENST00000516845 62 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 AC019288.1-201ENST00000557918 224 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 MIR4421-201ENST00000578133 69 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 MIR6078-201ENST00000611069 100 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 AC087741.2-201ENST00000619415 172 ntBASIC1.45□□□□□ -2.18
DKK3Q9UBP4 Y_RNA.85-201ENST00000363014 111 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 SNORD115-19-201ENST00000363098 82 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 SNORD115-18-201ENST00000363293 82 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 SNORD115-17-201ENST00000364612 82 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 SNORA25.8-201ENST00000364831 128 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 RNU6-396P-201ENST00000365369 105 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 Y_RNA.362-201ENST00000365518 110 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 RPS27P16-201ENST00000425758 201 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 AC245047.7-201ENST00000440265 293 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 RNU6-947P-201ENST00000516264 106 ntBASIC1.44□□□□□ -2.18
DKK3Q9UBP4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.44□□□□□ -2.18
DKK3Q9UBP4 AL589743.1-201ENST00000551932 2712 ntBASIC1.43□□□□□ -2.18
DKK3Q9UBP4 RNA5SP264-201ENST00000363115 107 ntBASIC1.43□□□□□ -2.18
DKK3Q9UBP4 SNORD12C-201ENST00000386307 89 ntBASIC1.43□□□□□ -2.18
DKK3Q9UBP4 MT-TN-201ENST00000387400 73 ntBASIC1.43□□□□□ -2.18
DKK3Q9UBP4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.43□□□□□ -2.18
DKK3Q9UBP4 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.43□□□□□ -2.18
DKK3Q9UBP4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
DKK3Q9UBP4 Y_RNA.49-201ENST00000362714 112 ntBASIC1.42□□□□□ -2.18
DKK3Q9UBP4 Y_RNA.344-201ENST00000365381 112 ntBASIC1.42□□□□□ -2.18
DKK3Q9UBP4 Y_RNA.549-201ENST00000384657 102 ntBASIC1.42□□□□□ -2.18
DKK3Q9UBP4 AC244023.1-201ENST00000426884 112 ntBASIC1.42□□□□□ -2.18
DKK3Q9UBP4 MIR2115-201ENST00000516657 100 ntBASIC1.42□□□□□ -2.18
DKK3Q9UBP4 MIR548AE2-201ENST00000583456 67 ntBASIC1.42□□□□□ -2.18
DKK3Q9UBP4 AC242498.1-201ENST00000604134 111 ntBASIC1.42□□□□□ -2.18
DKK3Q9UBP4 RNU6-94P-201ENST00000607728 107 ntBASIC1.42□□□□□ -2.18
DKK3Q9UBP4 AL353770.2-201ENST00000620024 78 ntBASIC1.42□□□□□ -2.18
DKK3Q9UBP4 SNORA25.3-201ENST00000363205 127 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 RNU6-1107P-201ENST00000364817 104 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 Y_RNA.323-201ENST00000365157 109 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 SNORA22-201ENST00000383907 134 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 SNORD77B-201ENST00000391112 67 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 MIR1185-1-201ENST00000408598 86 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 PDCD5P2-201ENST00000507570 312 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 RNU7-35P-201ENST00000517174 62 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 MIR4264-201ENST00000583520 66 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 AL035470.1-201ENST00000622571 220 ntBASIC1.41□□□□□ -2.18
DKK3Q9UBP4 RNU6-1086P-201ENST00000410930 100 ntBASIC1.4□□□□□ -2.19
DKK3Q9UBP4 MIR1270-201ENST00000459320 83 ntBASIC1.4□□□□□ -2.19
DKK3Q9UBP4 MIR377-201ENST00000362145 69 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 MIR103A2-201ENST00000362154 78 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 Y_RNA.309-201ENST00000365046 111 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 SNORA18-201ENST00000384416 132 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 MIR1912-201ENST00000410389 80 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 RNU6-613P-201ENST00000410412 108 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 snoU13.2-201ENST00000459201 104 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 RN7SKP88-201ENST00000516847 250 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.39□□□□□ -2.19
DKK3Q9UBP4 AP000753.3-201ENST00000604083 169 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 7SK.8-201ENST00000612110 250 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 7SK.11-201ENST00000615477 250 ntBASIC1.39□□□□□ -2.19
DKK3Q9UBP4 7SK.13-201ENST00000622040 250 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 173.2 ms