Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 RNA5SP95-201ENST00000410319 137 ntBASIC1.58□□□□□ -2.16
KCMF1Q9P0J7 SNORA7.5-201ENST00000410672 110 ntBASIC1.58□□□□□ -2.16
KCMF1Q9P0J7 snoU13.2-201ENST00000459201 104 ntBASIC1.58□□□□□ -2.16
KCMF1Q9P0J7 AC048334.1-201ENST00000477975 159 ntBASIC1.58□□□□□ -2.16
KCMF1Q9P0J7 RNU11-2P-201ENST00000516898 142 ntBASIC1.58□□□□□ -2.16
KCMF1Q9P0J7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.58□□□□□ -2.16
KCMF1Q9P0J7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
KCMF1Q9P0J7 RNU6-363P-201ENST00000362895 105 ntBASIC1.57□□□□□ -2.16
KCMF1Q9P0J7 RNU6-409P-201ENST00000384114 104 ntBASIC1.57□□□□□ -2.16
KCMF1Q9P0J7 SNORA51.5-201ENST00000384126 131 ntBASIC1.57□□□□□ -2.16
KCMF1Q9P0J7 MIR3613-201ENST00000579844 87 ntBASIC1.57□□□□□ -2.16
KCMF1Q9P0J7 MIR4264-201ENST00000583520 66 ntBASIC1.57□□□□□ -2.16
KCMF1Q9P0J7 RNU6-756P-201ENST00000383997 107 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 MIR605-201ENST00000385078 83 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 RNU6-733P-201ENST00000410759 104 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 SNORA31.2-201ENST00000516019 134 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 SNORD67.1-201ENST00000516618 108 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 RNU6-521P-201ENST00000516663 105 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 AC141557.1-201ENST00000540982 400 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 AC141846.1-201ENST00000568348 142 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 MIR4285-201ENST00000581001 85 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 AL662814.1-201ENST00000617364 121 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 MIR6740-201ENST00000618268 113 ntBASIC1.56□□□□□ -2.16
KCMF1Q9P0J7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.55□□□□□ -2.16
KCMF1Q9P0J7 MT-TN-201ENST00000387400 73 ntBASIC1.55□□□□□ -2.16
KCMF1Q9P0J7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.55□□□□□ -2.16
KCMF1Q9P0J7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.55□□□□□ -2.16
KCMF1Q9P0J7 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.55□□□□□ -2.16
KCMF1Q9P0J7 RNU7-62P-201ENST00000458856 62 ntBASIC1.55□□□□□ -2.16
KCMF1Q9P0J7 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
KCMF1Q9P0J7 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 RNY1P13-201ENST00000365030 105 ntBASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 MIR206-201ENST00000384872 86 ntBASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 RNU6-613P-201ENST00000410412 108 ntBASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 SNORA19.1-201ENST00000410656 129 ntBASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 RNU7-2P-201ENST00000516096 62 ntBASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 AC105081.1-201ENST00000617727 106 ntBASIC1.54□□□□□ -2.16
KCMF1Q9P0J7 RNU6-766P-201ENST00000362478 107 ntBASIC1.53□□□□□ -2.16
KCMF1Q9P0J7 SNORD115-35-201ENST00000365122 82 ntBASIC1.53□□□□□ -2.16
KCMF1Q9P0J7 Y_RNA.328-201ENST00000365208 113 ntBASIC1.53□□□□□ -2.16
KCMF1Q9P0J7 RNU6-679P-201ENST00000391003 106 ntBASIC1.53□□□□□ -2.16
KCMF1Q9P0J7 SNORA17.3-201ENST00000391159 129 ntBASIC1.53□□□□□ -2.16
KCMF1Q9P0J7 RNU7-137P-201ENST00000516788 62 ntBASIC1.53□□□□□ -2.16
KCMF1Q9P0J7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.53□□□□□ -2.16
KCMF1Q9P0J7 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 Y_RNA.360-201ENST00000365512 102 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 RNU6-32P-201ENST00000383948 107 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 RNU6-13P-201ENST00000384248 107 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 RNU6-1113P-201ENST00000384348 107 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 Y_RNA.495-201ENST00000384435 112 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 RNU6-12P-201ENST00000384604 107 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 RNU6-41P-201ENST00000384741 107 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 AL353813.1-201ENST00000440700 253 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 SEPT14P17-201ENST00000617978 177 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 AL512310.12-203ENST00000640543 90 ntBASIC1.52□□□□□ -2.17
KCMF1Q9P0J7 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 SNORD114-10-201ENST00000363409 72 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 Y_RNA.338-201ENST00000365320 114 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 Y_RNA.448-201ENST00000384185 108 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 SNORA2B-201ENST00000384583 137 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 MIR563-201ENST00000385080 79 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 RNU6-1307P-201ENST00000391012 103 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 SNORA75.2-201ENST00000391138 150 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 SNORA75.3-201ENST00000391231 150 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 AC108667.1-201ENST00000428618 249 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 RNU6-168P-201ENST00000516189 101 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 RNU6-970P-201ENST00000516312 107 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 uc_338.6-201ENST00000613544 171 ntBASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.51□□□□□ -2.17
KCMF1Q9P0J7 MIR377-201ENST00000362145 69 ntBASIC1.5□□□□□ -2.17
KCMF1Q9P0J7 Y_RNA.363-201ENST00000365529 113 ntBASIC1.5□□□□□ -2.17
KCMF1Q9P0J7 MIR590-201ENST00000385008 97 ntBASIC1.5□□□□□ -2.17
KCMF1Q9P0J7 MIR577-201ENST00000385196 96 ntBASIC1.5□□□□□ -2.17
KCMF1Q9P0J7 RNU6-1321P-201ENST00000390905 107 ntBASIC1.5□□□□□ -2.17
KCMF1Q9P0J7 RNA5SP89-201ENST00000410300 108 ntBASIC1.5□□□□□ -2.17
KCMF1Q9P0J7 MIR30D-201ENST00000362283 70 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 RNU6-1099P-201ENST00000363533 107 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 RNU4-36P-201ENST00000364294 144 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 RNU6-949P-201ENST00000384040 107 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 RNU6-910P-201ENST00000390844 107 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 RNU6-109P-201ENST00000516364 107 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 Y_RNA.676-201ENST00000516393 96 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 RNU6-184P-201ENST00000516514 107 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 RNU6-537P-201ENST00000517277 103 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 DEFB131E-201ENST00000532329 154 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 MIR4694-201ENST00000578534 80 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 SNORA4-201ENST00000584302 138 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
KCMF1Q9P0J7 RNY3P2-201ENST00000362918 102 ntBASIC1.48□□□□□ -2.17
KCMF1Q9P0J7 Y_RNA.78-201ENST00000362970 110 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms