Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 MIR548AO-201ENST00000579992 96 ntBASIC2.02□□□□□ -2.09
PDLIM7Q9NR12 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 Y_RNA.558-201ENST00000384685 113 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 MIR513A1-201ENST00000385138 129 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 RNU7-41P-201ENST00000515917 61 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 RNU6-844P-201ENST00000517175 102 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 AC103810.8-201ENST00000607347 118 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 AL442128.1-201ENST00000615151 90 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 AC012531.4-201ENST00000616509 177 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 MIR8065-201ENST00000620577 100 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 MIR4251-201ENST00000635819 61 ntBASIC2.01□□□□□ -2.09
PDLIM7Q9NR12 Y_RNA.224-201ENST00000364308 111 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 Y_RNA.354-201ENST00000365448 111 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 SNORA18-201ENST00000384416 132 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 AL451046.2-201ENST00000403074 277 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 SUMO2P12-201ENST00000405924 140 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 RNU6-602P-201ENST00000411155 105 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 HMGN2P38-201ENST00000423806 265 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 JTBP1-201ENST00000441314 247 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 AC008834.1-201ENST00000511612 175 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 RNU6-762P-201ENST00000517107 102 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2□□□□□ -2.09
PDLIM7Q9NR12 MIR548Z-201ENST00000584743 97 ntBASIC2□□□□□ -2.09
PDLIM7Q9NR12 RNU6-170P-201ENST00000362832 104 ntBASIC1.99□□□□□ -2.09
PDLIM7Q9NR12 RNU6-1201P-201ENST00000384227 107 ntBASIC1.99□□□□□ -2.09
PDLIM7Q9NR12 AC090844.1-201ENST00000422019 156 ntBASIC1.99□□□□□ -2.09
PDLIM7Q9NR12 CYP3A52P-201ENST00000563326 91 ntBASIC1.99□□□□□ -2.09
PDLIM7Q9NR12 MIR3935-201ENST00000583472 104 ntBASIC1.99□□□□□ -2.09
PDLIM7Q9NR12 AL512310.12-203ENST00000640543 90 ntBASIC1.99□□□□□ -2.09
PDLIM7Q9NR12 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
PDLIM7Q9NR12 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
PDLIM7Q9NR12 SNORA16.1-201ENST00000364597 132 ntBASIC1.98□□□□□ -2.09
PDLIM7Q9NR12 SNORD115-35-201ENST00000365122 82 ntBASIC1.98□□□□□ -2.09
PDLIM7Q9NR12 RNU6-644P-201ENST00000391155 98 ntBASIC1.98□□□□□ -2.09
PDLIM7Q9NR12 AC004941.2-201ENST00000427009 228 ntBASIC1.98□□□□□ -2.09
PDLIM7Q9NR12 RNU7-61P-201ENST00000515897 61 ntBASIC1.98□□□□□ -2.09
PDLIM7Q9NR12 RNU6-1018P-201ENST00000516577 106 ntBASIC1.98□□□□□ -2.09
PDLIM7Q9NR12 RNU7-35P-201ENST00000517174 62 ntBASIC1.98□□□□□ -2.09
PDLIM7Q9NR12 AC091304.10-201ENST00000641554 121 ntBASIC1.98□□□□□ -2.09
PDLIM7Q9NR12 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PDLIM7Q9NR12 Y_RNA.377-201ENST00000365644 108 ntBASIC1.97□□□□□ -2.09
PDLIM7Q9NR12 snoU13.9-201ENST00000458927 103 ntBASIC1.97□□□□□ -2.09
PDLIM7Q9NR12 Y_RNA.659-201ENST00000515994 113 ntBASIC1.97□□□□□ -2.09
PDLIM7Q9NR12 RNU7-2P-201ENST00000516096 62 ntBASIC1.97□□□□□ -2.09
PDLIM7Q9NR12 RNU6-922P-201ENST00000516753 99 ntBASIC1.97□□□□□ -2.09
PDLIM7Q9NR12 AL512598.1-201ENST00000610158 273 ntBASIC1.97□□□□□ -2.09
PDLIM7Q9NR12 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
PDLIM7Q9NR12 RNU6-1313P-201ENST00000362622 102 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 SNORD45B-201ENST00000364617 72 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 MIR206-201ENST00000384872 86 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 SNORA26.2-201ENST00000390922 122 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 MIR1276-201ENST00000408707 83 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 RNY4P29-201ENST00000410801 97 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 RNU6-1086P-201ENST00000410930 100 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 MIR4777-201ENST00000583710 86 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 MIR4448-201ENST00000584360 86 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 MIR502-201ENST00000606349 86 ntBASIC1.96□□□□□ -2.1
PDLIM7Q9NR12 SNORD33-201ENST00000362761 85 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 Y_RNA.290-201ENST00000364879 114 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 Y_RNA.388-201ENST00000383919 113 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 RNU6-1237P-201ENST00000384777 107 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 SNORD41-201ENST00000386967 70 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 RNU6-1307P-201ENST00000391012 103 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 MIR934-201ENST00000401241 83 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 AC096949.1-201ENST00000412047 152 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 RPL31P63-201ENST00000422565 375 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 AC009474.2-201ENST00000451383 136 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 RNU7-79P-201ENST00000516082 62 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 RNU6-162P-201ENST00000516228 103 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 SNORD111.1-201ENST00000516421 86 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 MIR4419B-201ENST00000577260 68 ntBASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
PDLIM7Q9NR12 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 RNU6-60P-201ENST00000364792 103 ntBASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 RNU6-392P-201ENST00000364926 101 ntBASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 SNORD48-201ENST00000364953 64 ntBASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 Y_RNA.327-201ENST00000365201 102 ntBASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 SNORD38B-201ENST00000384690 67 ntBASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 UBL5P1-201ENST00000507979 193 ntBASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 SNORD67.1-201ENST00000516618 108 ntBASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 AC026421.1-201ENST00000519101 163 ntBASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 SNORD38B-202ENST00000625943 69 ntBASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
PDLIM7Q9NR12 Y_RNA.95-201ENST00000363079 95 ntBASIC1.93□□□□□ -2.1
PDLIM7Q9NR12 SNORA77B-201ENST00000578179 125 ntBASIC1.93□□□□□ -2.1
PDLIM7Q9NR12 SNORA4-201ENST00000584302 138 ntBASIC1.93□□□□□ -2.1
PDLIM7Q9NR12 MIR3192-201ENST00000584920 77 ntBASIC1.93□□□□□ -2.1
PDLIM7Q9NR12 AC096720.1-201ENST00000604441 183 ntBASIC1.93□□□□□ -2.1
PDLIM7Q9NR12 U7.3-201ENST00000616123 62 ntBASIC1.93□□□□□ -2.1
PDLIM7Q9NR12 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 Y_RNA.247-201ENST00000364500 92 ntBASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 RNU6-1134P-201ENST00000365156 101 ntBASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 AC015688.6-201ENST00000577737 104 ntBASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 AC062037.1-201ENST00000605302 128 ntBASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 AL096861.1-201ENST00000610899 123 ntBASIC1.92□□□□□ -2.1
PDLIM7Q9NR12 MIR6504-201ENST00000613520 61 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms