Protein–RNA interactions for Protein: Q9NP99

TREM1, Triggering receptor expressed on myeloid cells 1, humanhuman

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1Q9NP99 RNU6-764P-201ENST00000516396 105 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 MIR5692C2-201ENST00000577959 77 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 Y_RNA.757-201ENST00000578934 114 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 AC021613.1-201ENST00000623880 111 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 MIR4320-201ENST00000636981 65 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 MIR382-201ENST00000637119 76 ntBASIC-1.25□□□□□ -2.61
TREM1Q9NP99 RNU4-32P-201ENST00000363404 141 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 RNY1P2-201ENST00000364820 117 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 MIR517B-201ENST00000385102 67 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 MIR518B-201ENST00000385127 83 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 RNU2-55P-201ENST00000411146 174 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 RNU7-79P-201ENST00000516082 62 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 AC069503.3-201ENST00000618674 145 ntBASIC-1.26□□□□□ -2.61
TREM1Q9NP99 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.27□□□□□ -2.61
TREM1Q9NP99 MIR526A2-201ENST00000390198 65 ntBASIC-1.27□□□□□ -2.61
TREM1Q9NP99 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.27□□□□□ -2.61
TREM1Q9NP99 SNORD22.1-201ENST00000516331 125 ntBASIC-1.27□□□□□ -2.61
TREM1Q9NP99 C8orf59P2-201ENST00000603441 271 ntBASIC-1.27□□□□□ -2.61
TREM1Q9NP99 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 RNU6-449P-201ENST00000383914 107 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 MIR147A-201ENST00000385079 72 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 RNU7-74P-201ENST00000459104 62 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 RNU7-55P-201ENST00000459426 62 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 RNA5SP153-201ENST00000516498 76 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 AC026421.1-201ENST00000519101 163 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 MIR5197-201ENST00000583721 112 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 AC138207.3-201ENST00000585289 166 ntBASIC-1.28□□□□□ -2.61
TREM1Q9NP99 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 Y_RNA.453-201ENST00000384223 109 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 RNU6-370P-201ENST00000411008 104 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 AC022137.1-201ENST00000483735 151 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 TRAJ51-201ENST00000504127 63 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 AC098479.1-201ENST00000609225 154 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 AC048344.4-201ENST00000619744 527 ntBASIC-1.29□□□□□ -2.62
TREM1Q9NP99 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 Y_RNA.304-201ENST00000365011 112 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 Y_RNA.366-201ENST00000365540 102 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 AC093423.1-201ENST00000440817 142 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 AP000533.3-201ENST00000447704 118 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 MTND1P29-201ENST00000448112 647 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 RNU7-13P-201ENST00000516413 62 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 MTND5P40-201ENST00000559945 246 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 RPS29P30-201ENST00000600975 111 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 AC145423.2-201ENST00000610631 239 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 AC011603.4-201ENST00000611325 277 ntBASIC-1.3□□□□□ -2.62
TREM1Q9NP99 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 RNU4-14P-201ENST00000410858 122 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 SNORD57-201ENST00000448188 72 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 RNU7-35P-201ENST00000517174 62 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 MIR548AG2-201ENST00000581228 64 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 AC097639.2-201ENST00000603159 172 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 MIR4272-201ENST00000635924 64 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 MIR376A2-201ENST00000636782 80 ntBASIC-1.31□□□□□ -2.62
TREM1Q9NP99 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.32□□□□□ -2.62
TREM1Q9NP99 MIR519E-201ENST00000385075 84 ntBASIC-1.32□□□□□ -2.62
TREM1Q9NP99 AC098614.3-201ENST00000438957 440 ntBASIC-1.32□□□□□ -2.62
TREM1Q9NP99 AC097635.1-201ENST00000450678 155 ntBASIC-1.32□□□□□ -2.62
TREM1Q9NP99 U8.20-201ENST00000459445 131 ntBASIC-1.32□□□□□ -2.62
TREM1Q9NP99 MIR5704-201ENST00000584029 77 ntBASIC-1.32□□□□□ -2.62
TREM1Q9NP99 AC133104.2-201ENST00000615272 193 ntBASIC-1.32□□□□□ -2.62
TREM1Q9NP99 U4.1-201ENST00000620349 87 ntBASIC-1.32□□□□□ -2.62
TREM1Q9NP99 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.33□□□□□ -2.62
TREM1Q9NP99 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.33□□□□□ -2.62
TREM1Q9NP99 SNORA49-201ENST00000386157 136 ntBASIC-1.33□□□□□ -2.62
TREM1Q9NP99 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.33□□□□□ -2.62
TREM1Q9NP99 RNU7-70P-201ENST00000516941 66 ntBASIC-1.33□□□□□ -2.62
TREM1Q9NP99 Y_RNA.802-201ENST00000614892 130 ntBASIC-1.33□□□□□ -2.62
TREM1Q9NP99 AL138825.1-201ENST00000618587 192 ntBASIC-1.33□□□□□ -2.62
TREM1Q9NP99 MIR3688-2-201ENST00000636963 87 ntBASIC-1.33□□□□□ -2.62
TREM1Q9NP99 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.34□□□□□ -2.62
TREM1Q9NP99 RNU6-484P-201ENST00000384016 107 ntBASIC-1.34□□□□□ -2.62
TREM1Q9NP99 Y_RNA.424-201ENST00000384063 103 ntBASIC-1.34□□□□□ -2.62
TREM1Q9NP99 RNU6-429P-201ENST00000384582 108 ntBASIC-1.34□□□□□ -2.62
TREM1Q9NP99 HLA-S-202ENST00000425174 53 ntBASIC-1.34□□□□□ -2.62
TREM1Q9NP99 MRPS35P2-201ENST00000508242 191 ntBASIC-1.34□□□□□ -2.62
TREM1Q9NP99 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.34□□□□□ -2.62
TREM1Q9NP99 RNA5SP461-201ENST00000516451 104 ntBASIC-1.34□□□□□ -2.62
TREM1Q9NP99 AC007485.1-201ENST00000616755 206 ntBASIC-1.34□□□□□ -2.62
TREM1Q9NP99 U4.5-201ENST00000617137 123 ntBASIC-1.34□□□□□ -2.62
TREM1Q9NP99 MIR20A-201ENST00000362279 71 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms