Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MRPS35P2-201ENST00000508242 191 ntBASIC-0.73□□□□□ -2.53
KIAA1549Q9HCM3 SERF1AP1-201ENST00000514575 187 ntBASIC-0.73□□□□□ -2.53
KIAA1549Q9HCM3 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-0.73□□□□□ -2.53
KIAA1549Q9HCM3 MIR4659A-201ENST00000580269 81 ntBASIC-0.73□□□□□ -2.53
KIAA1549Q9HCM3 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-0.73□□□□□ -2.53
KIAA1549Q9HCM3 AC048344.4-201ENST00000619744 527 ntBASIC-0.73□□□□□ -2.53
KIAA1549Q9HCM3 MIR6841-201ENST00000637129 72 ntBASIC-0.73□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-1188P-201ENST00000363795 107 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-899P-201ENST00000363947 107 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 AC097510.1-201ENST00000510945 133 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-706P-201ENST00000517229 104 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 AC145423.2-201ENST00000610631 239 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 Z99129.1-201ENST00000612510 255 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 AC133104.2-201ENST00000615272 193 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 AC099654.14-201ENST00000638599 341 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.23-201ENST00000362496 106 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 RNU4-16P-201ENST00000364737 141 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 MIR516A2-201ENST00000384888 90 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 MIR516A1-201ENST00000385033 90 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 AL603914.1-201ENST00000401964 204 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 MIR1468-201ENST00000410600 86 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 MTATP6P23-201ENST00000440153 476 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 SCARNA18B-201ENST00000458806 135 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-893P-201ENST00000458841 100 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 RNU7-80P-201ENST00000459562 61 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 AC109635.3-201ENST00000529536 185 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 AC009779.6-201ENST00000603972 165 ntBASIC-0.74□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-763P-201ENST00000390865 106 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 MIR548E-201ENST00000408287 88 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 RNU7-195P-201ENST00000458793 62 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.637-201ENST00000459424 114 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-264P-201ENST00000517134 104 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 AC026421.1-201ENST00000519101 163 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 MIR5197-201ENST00000583721 112 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 MIR5704-201ENST00000584029 77 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 AL359881.1-201ENST00000602916 267 ntBASIC-0.75□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.28-201ENST00000362554 111 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-888P-201ENST00000363010 101 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 MIR548I2-201ENST00000408348 149 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 AL445193.1-201ENST00000441183 141 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 AC244090.1-201ENST00000441884 93 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 MTCO2P24-201ENST00000515611 426 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 AC024909.2-201ENST00000553035 286 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 AL442663.2-201ENST00000554385 511 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 PART1_1.1-201ENST00000611761 217 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 AC021613.1-201ENST00000623880 111 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-664P-201ENST00000362381 107 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.314-201ENST00000365114 102 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 SNORD115-35-201ENST00000365122 82 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.424-201ENST00000384063 103 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 MIR519A1-201ENST00000385257 85 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 MIR216B-201ENST00000390186 82 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 RNU2-31P-201ENST00000516954 155 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 AC245505.1-201ENST00000556398 224 ntBASIC-0.76□□□□□ -2.53
KIAA1549Q9HCM3 SNORD36A-201ENST00000362874 73 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 SNORD74.6-201ENST00000364796 70 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-10P-201ENST00000384036 107 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 SNORA51.5-201ENST00000384126 131 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-476P-201ENST00000384726 107 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 RNU6-337P-201ENST00000391243 106 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 MIR548F5-201ENST00000408421 86 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 SNORD63B-201ENST00000411005 70 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 MTND1P1-201ENST00000445453 368 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 MTND5P5-201ENST00000503764 376 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 RNA5SP470-201ENST00000516463 106 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 RNU7-137P-201ENST00000516788 62 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 RNU4-10P-201ENST00000364383 140 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 RNY1P6-201ENST00000384193 109 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 AC107399.1-201ENST00000451226 265 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 HSPE1P25-201ENST00000455484 251 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.659-201ENST00000515994 113 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 SNORA40.17-201ENST00000517256 115 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 MIR3129-201ENST00000581095 76 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 YWHAEP3-201ENST00000582767 121 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 MIR3611-201ENST00000584484 83 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 AC138207.3-201ENST00000585289 166 ntBASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.77□□□□□ -2.53
KIAA1549Q9HCM3 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.78□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms