Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 SNRPGP12-201ENST00000449481 213 ntBASIC0.31□□□□□ -2.36
CCDC68Q9H2F9 MIR4491-201ENST00000581087 68 ntBASIC0.31□□□□□ -2.36
CCDC68Q9H2F9 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.31□□□□□ -2.36
CCDC68Q9H2F9 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.31□□□□□ -2.36
CCDC68Q9H2F9 SNORD114-26-201ENST00000363543 72 ntBASIC0.3□□□□□ -2.36
CCDC68Q9H2F9 SNORD118-201ENST00000363593 134 ntBASIC0.3□□□□□ -2.36
CCDC68Q9H2F9 Y_RNA.588-201ENST00000391254 102 ntBASIC0.3□□□□□ -2.36
CCDC68Q9H2F9 Y_RNA.626-201ENST00000411288 95 ntBASIC0.3□□□□□ -2.36
CCDC68Q9H2F9 RNA5SP480-201ENST00000516840 109 ntBASIC0.3□□□□□ -2.36
CCDC68Q9H2F9 AL360085.1-201ENST00000604713 532 ntBASIC0.3□□□□□ -2.36
CCDC68Q9H2F9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.29□□□□□ -2.36
CCDC68Q9H2F9 MIR193B-201ENST00000384907 83 ntBASIC0.29□□□□□ -2.36
CCDC68Q9H2F9 AL512326.2-201ENST00000426359 151 ntBASIC0.29□□□□□ -2.36
CCDC68Q9H2F9 RNU6-765P-201ENST00000516916 99 ntBASIC0.29□□□□□ -2.36
CCDC68Q9H2F9 MIR4308-201ENST00000580634 81 ntBASIC0.29□□□□□ -2.36
CCDC68Q9H2F9 RNA5SP62-201ENST00000363457 110 ntBASIC0.28□□□□□ -2.36
CCDC68Q9H2F9 Y_RNA.466-201ENST00000384294 113 ntBASIC0.28□□□□□ -2.36
CCDC68Q9H2F9 Y_RNA.521-201ENST00000384560 114 ntBASIC0.28□□□□□ -2.36
CCDC68Q9H2F9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.28□□□□□ -2.36
CCDC68Q9H2F9 MTCYBP9-201ENST00000431021 303 ntBASIC0.28□□□□□ -2.36
CCDC68Q9H2F9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.36
CCDC68Q9H2F9 MTND5P32-201ENST00000560711 1802 ntBASIC0.27□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.174-201ENST00000363781 105 ntBASIC0.27□□□□□ -2.37
CCDC68Q9H2F9 RNY1P6-201ENST00000384193 109 ntBASIC0.27□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.20-201ENST00000362479 113 ntBASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 RNU6-275P-201ENST00000364910 107 ntBASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 RNY1P13-201ENST00000365030 105 ntBASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.539-201ENST00000384635 107 ntBASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 AC108740.1-201ENST00000498629 225 ntBASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 RNU6-327P-201ENST00000516270 127 ntBASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.757-201ENST00000578934 114 ntBASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.26□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.32-201ENST00000362589 110 ntBASIC0.25□□□□□ -2.37
CCDC68Q9H2F9 SNORA36.1-201ENST00000363424 132 ntBASIC0.25□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.350-201ENST00000365409 98 ntBASIC0.25□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.478-201ENST00000384358 107 ntBASIC0.25□□□□□ -2.37
CCDC68Q9H2F9 RNU6-1086P-201ENST00000410930 100 ntBASIC0.25□□□□□ -2.37
CCDC68Q9H2F9 SNORA31.14-201ENST00000516728 116 ntBASIC0.25□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.697-201ENST00000516776 113 ntBASIC0.25□□□□□ -2.37
CCDC68Q9H2F9 MRPS18CP4-201ENST00000535821 231 ntBASIC0.25□□□□□ -2.37
CCDC68Q9H2F9 MIR1273G-201ENST00000577677 100 ntBASIC0.25□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.171-201ENST00000363760 102 ntBASIC0.24□□□□□ -2.37
CCDC68Q9H2F9 RNU6-1336P-201ENST00000383886 109 ntBASIC0.24□□□□□ -2.37
CCDC68Q9H2F9 SNORD58.1-201ENST00000391313 66 ntBASIC0.24□□□□□ -2.37
CCDC68Q9H2F9 AC096949.1-201ENST00000412047 152 ntBASIC0.24□□□□□ -2.37
CCDC68Q9H2F9 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC0.24□□□□□ -2.37
CCDC68Q9H2F9 SNORA25.16-201ENST00000516741 121 ntBASIC0.24□□□□□ -2.37
CCDC68Q9H2F9 RNA5SP268-201ENST00000516828 124 ntBASIC0.24□□□□□ -2.37
CCDC68Q9H2F9 RNU6-1258P-201ENST00000516911 111 ntBASIC0.24□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.133-201ENST00000363428 110 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 RNU6-1099P-201ENST00000363533 107 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 RNU6-1229P-201ENST00000364295 107 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.536-201ENST00000384621 113 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 RNU6-535P-201ENST00000384722 107 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 RNU7-113P-201ENST00000459273 62 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 RNU6-863P-201ENST00000515989 104 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 RNU7-79P-201ENST00000516082 62 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.668-201ENST00000516233 93 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 RNU4-71P-201ENST00000516258 113 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 RNU6-135P-201ENST00000516769 101 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 DEFB131E-201ENST00000532329 154 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 MIR3128-201ENST00000581957 66 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 U6.106-201ENST00000636360 105 ntBASIC0.23□□□□□ -2.37
CCDC68Q9H2F9 RNU6-349P-201ENST00000362402 107 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 RNU6-694P-201ENST00000364071 147 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.412-201ENST00000384001 104 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 MIR568-201ENST00000385036 95 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 RNU2-59P-201ENST00000410482 191 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 RNA5SP144-201ENST00000410846 116 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 AL022718.1-201ENST00000412004 84 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 AC073261.1-201ENST00000429409 121 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 AC062037.2-201ENST00000610137 73 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 AC078938.1-201ENST00000620993 318 ntBASIC0.22□□□□□ -2.37
CCDC68Q9H2F9 Y_RNA.75-201ENST00000362927 97 ntBASIC0.21□□□□□ -2.38
CCDC68Q9H2F9 RNU6-291P-201ENST00000384720 107 ntBASIC0.21□□□□□ -2.38
CCDC68Q9H2F9 AL118496.2-201ENST00000448300 230 ntBASIC0.21□□□□□ -2.38
CCDC68Q9H2F9 MTND5P34-201ENST00000568888 325 ntBASIC0.21□□□□□ -2.38
CCDC68Q9H2F9 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.21□□□□□ -2.38
CCDC68Q9H2F9 MIR924-201ENST00000638017 53 ntBASIC0.21□□□□□ -2.38
CCDC68Q9H2F9 SUMO1P3-201ENST00000439961 304 ntBASIC0.2□□□□□ -2.38
CCDC68Q9H2F9 SNORA62.5-201ENST00000516634 120 ntBASIC0.2□□□□□ -2.38
CCDC68Q9H2F9 RNA5SP33-201ENST00000516687 98 ntBASIC0.2□□□□□ -2.38
CCDC68Q9H2F9 Y_RNA.52-201ENST00000362760 96 ntBASIC0.19□□□□□ -2.38
CCDC68Q9H2F9 SNORA20.1-201ENST00000364790 130 ntBASIC0.19□□□□□ -2.38
CCDC68Q9H2F9 RNU6-815P-201ENST00000384080 113 ntBASIC0.19□□□□□ -2.38
CCDC68Q9H2F9 RNA5SP227-201ENST00000516184 113 ntBASIC0.19□□□□□ -2.38
CCDC68Q9H2F9 RNU6-1194P-201ENST00000516208 104 ntBASIC0.19□□□□□ -2.38
CCDC68Q9H2F9 MIR4431-201ENST00000579990 94 ntBASIC0.19□□□□□ -2.38
CCDC68Q9H2F9 Y_RNA.470-201ENST00000384307 117 ntBASIC0.18□□□□□ -2.38
CCDC68Q9H2F9 MIR7-2-201ENST00000384970 110 ntBASIC0.18□□□□□ -2.38
CCDC68Q9H2F9 SCARNA16.5-201ENST00000517114 183 ntBASIC0.18□□□□□ -2.38
CCDC68Q9H2F9 RNU7-35P-201ENST00000517174 62 ntBASIC0.18□□□□□ -2.38
CCDC68Q9H2F9 AC112693.2-201ENST00000556538 232 ntBASIC0.18□□□□□ -2.38
CCDC68Q9H2F9 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
CCDC68Q9H2F9 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.18□□□□□ -2.38
CCDC68Q9H2F9 MIR330-201ENST00000362196 94 ntBASIC0.17□□□□□ -2.38
CCDC68Q9H2F9 Y_RNA.60-201ENST00000362831 98 ntBASIC0.17□□□□□ -2.38
CCDC68Q9H2F9 Y_RNA.162-201ENST00000363683 102 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 245.5 ms