Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 RNU6-290P-201ENST00000365212 101 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.549-201ENST00000384657 102 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 SNORA53-201ENST00000391141 249 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 RNU6-876P-201ENST00000391295 104 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 RNU6-893P-201ENST00000458841 100 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 SNORD67.1-201ENST00000516618 108 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 RNU7-10P-201ENST00000607194 63 ntBASIC-0.8□□□□□ -2.54
NKX6-2Q9C056 RNU6-449P-201ENST00000383914 107 ntBASIC-0.81□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.81□□□□□ -2.54
NKX6-2Q9C056 AC097635.1-201ENST00000450678 155 ntBASIC-0.81□□□□□ -2.54
NKX6-2Q9C056 TRAJ51-201ENST00000504127 63 ntBASIC-0.81□□□□□ -2.54
NKX6-2Q9C056 RNA5SP480-201ENST00000516840 109 ntBASIC-0.81□□□□□ -2.54
NKX6-2Q9C056 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-0.81□□□□□ -2.54
NKX6-2Q9C056 AL359881.1-201ENST00000602916 267 ntBASIC-0.81□□□□□ -2.54
NKX6-2Q9C056 AC092794.1-201ENST00000612734 582 ntBASIC-0.81□□□□□ -2.54
NKX6-2Q9C056 SNORD114-14-201ENST00000362723 75 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 RNA5SP98-201ENST00000363158 137 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.154-201ENST00000363624 102 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 AL606845.1-201ENST00000404881 255 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 RNU6-735P-201ENST00000410612 107 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 AL022718.1-201ENST00000412004 84 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 Z83846.1-201ENST00000446798 265 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 MTND4LP30-201ENST00000454092 297 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 RNU7-113P-201ENST00000459273 62 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 MIR4493-201ENST00000584016 73 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 MIR4436A-201ENST00000585278 85 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 AC037487.3-201ENST00000606668 112 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 AC073869.6-201ENST00000640656 341 ntBASIC-0.82□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 RNY3P5-201ENST00000384127 102 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 MIR635-201ENST00000384830 98 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 SNORD115-46-201ENST00000390982 71 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 AC082651.2-201ENST00000496833 166 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 RNA5SP33-201ENST00000516687 98 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 RNA5SP66-201ENST00000517178 101 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 MIR3920-201ENST00000581751 86 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 AC006504.6-201ENST00000590142 199 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 AL365205.2-201ENST00000594586 68 ntBASIC-0.83□□□□□ -2.54
NKX6-2Q9C056 RNU6-429P-201ENST00000384582 108 ntBASIC-0.84□□□□□ -2.54
NKX6-2Q9C056 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.84□□□□□ -2.54
NKX6-2Q9C056 RNU6-277P-201ENST00000516272 106 ntBASIC-0.84□□□□□ -2.54
NKX6-2Q9C056 RNU7-13P-201ENST00000516413 62 ntBASIC-0.84□□□□□ -2.54
NKX6-2Q9C056 RNU6-453P-201ENST00000516819 85 ntBASIC-0.84□□□□□ -2.54
NKX6-2Q9C056 MIR4802-201ENST00000581881 80 ntBASIC-0.84□□□□□ -2.54
NKX6-2Q9C056 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.384-201ENST00000383909 102 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 RNU6-211P-201ENST00000384047 107 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 RNU6-455P-201ENST00000384681 107 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 MT-TL1-201ENST00000386347 75 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 SNORA3B-201ENST00000391305 131 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 RNA5SP144-201ENST00000410846 116 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 SNORA27.4-201ENST00000516650 95 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 MIR1302-1-201ENST00000637932 143 ntBASIC-0.85□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.170-201ENST00000363746 110 ntBASIC-0.86□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.86□□□□□ -2.55
NKX6-2Q9C056 RNU1-141P-201ENST00000364623 158 ntBASIC-0.86□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.86□□□□□ -2.55
NKX6-2Q9C056 RNU7-152P-201ENST00000458982 64 ntBASIC-0.86□□□□□ -2.55
NKX6-2Q9C056 RNU7-74P-201ENST00000459104 62 ntBASIC-0.86□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.86□□□□□ -2.55
NKX6-2Q9C056 SCARNA15-202ENST00000516881 127 ntBASIC-0.86□□□□□ -2.55
NKX6-2Q9C056 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.86□□□□□ -2.55
NKX6-2Q9C056 SNORD114-10-201ENST00000363409 72 ntBASIC-0.87□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.176-201ENST00000363815 109 ntBASIC-0.87□□□□□ -2.55
NKX6-2Q9C056 snoU2_19.4-201ENST00000364329 80 ntBASIC-0.87□□□□□ -2.55
NKX6-2Q9C056 RNU6-326P-201ENST00000365480 107 ntBASIC-0.87□□□□□ -2.55
NKX6-2Q9C056 RNY1P6-201ENST00000384193 109 ntBASIC-0.87□□□□□ -2.55
NKX6-2Q9C056 MIR181B2-201ENST00000385004 89 ntBASIC-0.87□□□□□ -2.55
NKX6-2Q9C056 MIR5589-201ENST00000579442 60 ntBASIC-0.87□□□□□ -2.55
NKX6-2Q9C056 MIR548AE2-201ENST00000583456 67 ntBASIC-0.87□□□□□ -2.55
NKX6-2Q9C056 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.87□□□□□ -2.55
NKX6-2Q9C056 RNU6-47P-201ENST00000383866 107 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 MIR224-201ENST00000384889 81 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 SNORA79-201ENST00000408376 140 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 MIR1912-201ENST00000410389 80 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 RNU6-121P-201ENST00000410525 99 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 RNU6-976P-201ENST00000516086 111 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 Y_RNA.673-201ENST00000516306 88 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 RNU6-570P-201ENST00000517051 105 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 MTND5P40-201ENST00000559945 246 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 MIR4500-201ENST00000579472 76 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 MIR6779-201ENST00000617283 64 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 uc_338.10-201ENST00000621872 182 ntBASIC-0.88□□□□□ -2.55
NKX6-2Q9C056 AC090574.1-201ENST00000623186 233 ntBASIC-0.88□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 187.1 ms