Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 RNU6-893P-201ENST00000458841 100 ntBASIC0.72□□□□□ -2.29
PCDH11YQ9BZA8 RNU7-120P-201ENST00000459334 63 ntBASIC0.72□□□□□ -2.29
PCDH11YQ9BZA8 RNU6-977P-201ENST00000516411 103 ntBASIC0.72□□□□□ -2.29
PCDH11YQ9BZA8 RNU6-229P-201ENST00000516614 102 ntBASIC0.72□□□□□ -2.29
PCDH11YQ9BZA8 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.72□□□□□ -2.29
PCDH11YQ9BZA8 MTND5P32-201ENST00000560711 1802 ntBASIC0.72□□□□□ -2.29
PCDH11YQ9BZA8 Y_RNA.29-201ENST00000362570 113 ntBASIC0.71□□□□□ -2.3
PCDH11YQ9BZA8 Y_RNA.240-201ENST00000364469 95 ntBASIC0.71□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-1336P-201ENST00000383886 109 ntBASIC0.71□□□□□ -2.3
PCDH11YQ9BZA8 MIR3646-201ENST00000578301 84 ntBASIC0.71□□□□□ -2.3
PCDH11YQ9BZA8 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.71□□□□□ -2.3
PCDH11YQ9BZA8 uc_338.6-201ENST00000613544 171 ntBASIC0.71□□□□□ -2.3
PCDH11YQ9BZA8 MIR6841-201ENST00000637129 72 ntBASIC0.71□□□□□ -2.3
PCDH11YQ9BZA8 Y_RNA.52-201ENST00000362760 96 ntBASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 RNU4-84P-201ENST00000364200 139 ntBASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-818P-201ENST00000364837 108 ntBASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 MIR520F-201ENST00000384824 87 ntBASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 MIR605-201ENST00000385078 83 ntBASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 MIR4676-201ENST00000583078 72 ntBASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 AC104465.1-201ENST00000611365 139 ntBASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 MIR2909-201ENST00000617113 69 ntBASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 MIR6844-201ENST00000637122 62 ntBASIC0.7□□□□□ -2.3
PCDH11YQ9BZA8 SNORA22.1-201ENST00000362701 134 ntBASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-1082P-201ENST00000364574 107 ntBASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-1318P-201ENST00000365389 103 ntBASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 RNY1P6-201ENST00000384193 109 ntBASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 Y_RNA.785-201ENST00000384290 109 ntBASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-110P-201ENST00000384508 104 ntBASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 Y_RNA.662-201ENST00000516028 97 ntBASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 SNORA81.3-201ENST00000517283 198 ntBASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 MIR4804-201ENST00000581683 73 ntBASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.69□□□□□ -2.3
PCDH11YQ9BZA8 MIR30D-201ENST00000362283 70 ntBASIC0.68□□□□□ -2.3
PCDH11YQ9BZA8 RNU1-119P-201ENST00000391122 165 ntBASIC0.68□□□□□ -2.3
PCDH11YQ9BZA8 MIR1257-201ENST00000408490 117 ntBASIC0.68□□□□□ -2.3
PCDH11YQ9BZA8 RNA5SP237-201ENST00000410414 113 ntBASIC0.68□□□□□ -2.3
PCDH11YQ9BZA8 RNU7-121P-201ENST00000516604 62 ntBASIC0.68□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-861P-201ENST00000516745 106 ntBASIC0.68□□□□□ -2.3
PCDH11YQ9BZA8 AC020891.4-201ENST00000605745 93 ntBASIC0.68□□□□□ -2.3
PCDH11YQ9BZA8 AC023934.1-201ENST00000574529 2389 ntBASIC0.68□□□□□ -2.3
PCDH11YQ9BZA8 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 MIR938-201ENST00000401216 83 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 AC244098.3-201ENST00000424803 96 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 AC015818.7-201ENST00000428754 109 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 AC087499.7-201ENST00000441958 109 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 RNU7-185P-201ENST00000459215 60 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 RNA5SP236-201ENST00000516169 116 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 AL662814.1-201ENST00000617364 121 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 MIR5087-201ENST00000635826 76 ntBASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-682P-201ENST00000363843 106 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 RNU4-16P-201ENST00000364737 141 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 Y_RNA.441-201ENST00000384123 112 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 MIR520H-201ENST00000385126 88 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 MIR125B2-201ENST00000385128 89 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-1135P-201ENST00000411083 103 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 RNU5E-9P-201ENST00000411164 104 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 MTATP6P21-201ENST00000440681 189 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 HAR1A.1-201ENST00000459583 118 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 DNAJC19P2-201ENST00000593340 302 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 AC004792.1-201ENST00000614523 137 ntBASIC0.66□□□□□ -2.3
PCDH11YQ9BZA8 Y_RNA.497-201ENST00000384447 98 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 MIR573-201ENST00000384964 99 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 SNORD37.2-201ENST00000391075 66 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-588P-201ENST00000410281 105 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 RNU7-56P-201ENST00000458744 62 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 AC011603.4-201ENST00000611325 277 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 AC243829.6-201ENST00000612652 106 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.65□□□□□ -2.3
PCDH11YQ9BZA8 RNU6-349P-201ENST00000362402 107 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-364P-201ENST00000384387 107 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RPL39P25-201ENST00000449384 154 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 VTRNA1-3-201ENST00000365645 89 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-35P-201ENST00000384530 107 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-447P-201ENST00000410293 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-1118P-201ENST00000410382 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-1076P-201ENST00000410397 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-355P-201ENST00000410427 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-791P-201ENST00000410467 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-705P-201ENST00000410601 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-1100P-201ENST00000410691 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-733P-201ENST00000410759 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-860P-201ENST00000410860 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-1217P-201ENST00000411276 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 RNU6-785P-201ENST00000411324 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 Y_RNA.757-201ENST00000578934 114 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 U6.90-201ENST00000614007 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 U6.70-201ENST00000620287 104 ntBASIC0.64□□□□□ -2.31
PCDH11YQ9BZA8 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
PCDH11YQ9BZA8 Y_RNA.272-201ENST00000364696 102 ntBASIC0.63□□□□□ -2.31
PCDH11YQ9BZA8 SNORD18B-201ENST00000365659 72 ntBASIC0.63□□□□□ -2.31
PCDH11YQ9BZA8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.63□□□□□ -2.31
PCDH11YQ9BZA8 RNA5SP144-201ENST00000410846 116 ntBASIC0.63□□□□□ -2.31
PCDH11YQ9BZA8 AL022718.1-201ENST00000412004 84 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms