Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 Y_RNA.676-201ENST00000516393 96 ntBASIC1.3□□□□□ -2.2
VRK1Q99986 MIR7974-201ENST00000615835 79 ntBASIC1.3□□□□□ -2.2
VRK1Q99986 MT-TI-201ENST00000387365 69 ntBASIC1.29□□□□□ -2.2
VRK1Q99986 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
VRK1Q99986 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
VRK1Q99986 MIR30D-201ENST00000362283 70 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 RNY4P6-201ENST00000363667 96 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 Y_RNA.353-201ENST00000365440 108 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 RNU6-1237P-201ENST00000384777 107 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 AL354695.1-201ENST00000427935 228 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 RNU7-79P-201ENST00000516082 62 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 AC019288.1-201ENST00000557918 224 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 AC141846.1-201ENST00000568348 142 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 AC023827.1-201ENST00000569247 97 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 AL359881.1-201ENST00000602916 267 ntBASIC1.28□□□□□ -2.2
VRK1Q99986 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.28□□□□□ -2.21
VRK1Q99986 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
VRK1Q99986 MIR26B-201ENST00000362251 77 ntBASIC1.27□□□□□ -2.21
VRK1Q99986 MIR337-201ENST00000362281 93 ntBASIC1.27□□□□□ -2.21
VRK1Q99986 Y_RNA.4-201ENST00000362333 112 ntBASIC1.27□□□□□ -2.21
VRK1Q99986 RNU6-834P-201ENST00000362367 110 ntBASIC1.27□□□□□ -2.21
VRK1Q99986 RNU1-124P-201ENST00000363861 145 ntBASIC1.27□□□□□ -2.21
VRK1Q99986 SNORD77B-201ENST00000391112 67 ntBASIC1.27□□□□□ -2.21
VRK1Q99986 TRMT112P2-201ENST00000512910 132 ntBASIC1.27□□□□□ -2.21
VRK1Q99986 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.26□□□□□ -2.21
VRK1Q99986 SNORD115-19-201ENST00000363098 82 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 SNORD115-18-201ENST00000363293 82 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 SNORA7.1-201ENST00000363750 139 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 SNORD115-17-201ENST00000364612 82 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 SNORA25.8-201ENST00000364831 128 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 RNU6-949P-201ENST00000384040 107 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 MIR1270-201ENST00000459320 83 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 RNU7-6P-201ENST00000516845 62 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 SNORA4-201ENST00000584302 138 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 MIR4781-201ENST00000585250 76 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 uc_338.6-201ENST00000613544 171 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 AL157834.3-201ENST00000615543 103 ntBASIC1.26□□□□□ -2.21
VRK1Q99986 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.25□□□□□ -2.21
VRK1Q99986 RNY1P13-201ENST00000365030 105 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 SNORA32-201ENST00000384072 121 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 Y_RNA.649-201ENST00000459077 103 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 SNORD33.1-201ENST00000516213 88 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 RNA5SP61-201ENST00000516453 100 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 MIR548AI-201ENST00000579940 88 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 AL670379.3-201ENST00000605040 251 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 AL359821.1-201ENST00000605519 182 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 AC087741.2-201ENST00000619415 172 ntBASIC1.25□□□□□ -2.21
VRK1Q99986 MIR548D2-201ENST00000384955 97 ntBASIC1.24□□□□□ -2.21
VRK1Q99986 MIR548A3-201ENST00000385297 97 ntBASIC1.24□□□□□ -2.21
VRK1Q99986 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.24□□□□□ -2.21
VRK1Q99986 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.24□□□□□ -2.21
VRK1Q99986 RNU6-735P-201ENST00000410612 107 ntBASIC1.24□□□□□ -2.21
VRK1Q99986 MIR4679-2-201ENST00000578358 77 ntBASIC1.24□□□□□ -2.21
VRK1Q99986 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
VRK1Q99986 Y_RNA.291-201ENST00000364886 113 ntBASIC1.23□□□□□ -2.21
VRK1Q99986 RNU6-934P-201ENST00000365154 107 ntBASIC1.23□□□□□ -2.21
VRK1Q99986 MIR200A-201ENST00000384875 90 ntBASIC1.23□□□□□ -2.21
VRK1Q99986 RNU6-321P-201ENST00000410912 106 ntBASIC1.23□□□□□ -2.21
VRK1Q99986 MIR4421-201ENST00000578133 69 ntBASIC1.23□□□□□ -2.21
VRK1Q99986 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.23□□□□□ -2.21
VRK1Q99986 SNORD114-10-201ENST00000363409 72 ntBASIC1.22□□□□□ -2.21
VRK1Q99986 snoU13.21-201ENST00000459368 105 ntBASIC1.22□□□□□ -2.21
VRK1Q99986 FAM71BP1-201ENST00000604431 523 ntBASIC1.22□□□□□ -2.21
VRK1Q99986 RNU6-94P-201ENST00000607728 107 ntBASIC1.22□□□□□ -2.21
VRK1Q99986 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.22□□□□□ -2.21
VRK1Q99986 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
VRK1Q99986 Y_RNA.273-201ENST00000364703 102 ntBASIC1.21□□□□□ -2.22
VRK1Q99986 Y_RNA.327-201ENST00000365201 102 ntBASIC1.21□□□□□ -2.22
VRK1Q99986 RNU6-1144P-201ENST00000384247 104 ntBASIC1.21□□□□□ -2.22
VRK1Q99986 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
VRK1Q99986 RPS26P5-201ENST00000418544 335 ntBASIC1.21□□□□□ -2.22
VRK1Q99986 FABP5P4-201ENST00000437203 171 ntBASIC1.21□□□□□ -2.22
VRK1Q99986 RNU7-137P-201ENST00000516788 62 ntBASIC1.21□□□□□ -2.22
VRK1Q99986 AC007012.1-201ENST00000567192 175 ntBASIC1.21□□□□□ -2.22
VRK1Q99986 AL391516.1-201ENST00000554380 2449 ntBASIC1.21□□□□□ -2.22
VRK1Q99986 RNY1P10-201ENST00000363268 113 ntBASIC1.2□□□□□ -2.22
VRK1Q99986 RNU6-939P-201ENST00000384634 107 ntBASIC1.2□□□□□ -2.22
VRK1Q99986 MIR758-201ENST00000390227 88 ntBASIC1.2□□□□□ -2.22
VRK1Q99986 RNU6-1064P-201ENST00000410626 104 ntBASIC1.2□□□□□ -2.22
VRK1Q99986 SNORD83.1-201ENST00000411362 77 ntBASIC1.2□□□□□ -2.22
VRK1Q99986 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.2□□□□□ -2.22
VRK1Q99986 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
VRK1Q99986 SNORD67.1-201ENST00000516618 108 ntBASIC1.2□□□□□ -2.22
VRK1Q99986 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.2□□□□□ -2.22
VRK1Q99986 RNU6-1056P-201ENST00000383996 107 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 RNU6-476P-201ENST00000384726 107 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 MIR548A1-201ENST00000385041 97 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 U8.15-201ENST00000390947 134 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 RNU6-447P-201ENST00000410293 104 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 RNU6-1118P-201ENST00000410382 104 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 RNU6-1076P-201ENST00000410397 104 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 RNU6-355P-201ENST00000410427 104 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 RNU6-791P-201ENST00000410467 104 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 RNU6-705P-201ENST00000410601 104 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 RNU6-1100P-201ENST00000410691 104 ntBASIC1.19□□□□□ -2.22
VRK1Q99986 RNU6-860P-201ENST00000410860 104 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms