Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNA5SP325-201ENST00000363756 130 ntBASIC1.42□□□□□ -2.18
SMOQ99835 Y_RNA.191-201ENST00000363972 113 ntBASIC1.42□□□□□ -2.18
SMOQ99835 MIR1276-201ENST00000408707 83 ntBASIC1.42□□□□□ -2.18
SMOQ99835 RNA5SP95-201ENST00000410319 137 ntBASIC1.42□□□□□ -2.18
SMOQ99835 MIR2115-201ENST00000516657 100 ntBASIC1.42□□□□□ -2.18
SMOQ99835 RNU11-2P-201ENST00000516898 142 ntBASIC1.42□□□□□ -2.18
SMOQ99835 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.42□□□□□ -2.18
SMOQ99835 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
SMOQ99835 SNORA32-201ENST00000384072 121 ntBASIC1.41□□□□□ -2.18
SMOQ99835 SNORA18-201ENST00000384416 132 ntBASIC1.41□□□□□ -2.18
SMOQ99835 SNORD20-201ENST00000384550 80 ntBASIC1.41□□□□□ -2.18
SMOQ99835 RNU6-205P-201ENST00000390858 107 ntBASIC1.41□□□□□ -2.18
SMOQ99835 SNORA75.2-201ENST00000391138 150 ntBASIC1.41□□□□□ -2.18
SMOQ99835 SNORA75.3-201ENST00000391231 150 ntBASIC1.41□□□□□ -2.18
SMOQ99835 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.41□□□□□ -2.18
SMOQ99835 RNU1-123P-201ENST00000458950 160 ntBASIC1.41□□□□□ -2.18
SMOQ99835 AC004223.1-201ENST00000479840 271 ntBASIC1.41□□□□□ -2.18
SMOQ99835 RNU7-6P-201ENST00000516845 62 ntBASIC1.41□□□□□ -2.18
SMOQ99835 MIR3163-201ENST00000581592 73 ntBASIC1.41□□□□□ -2.18
SMOQ99835 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.41□□□□□ -2.18
SMOQ99835 AL391516.1-201ENST00000554380 2449 ntBASIC1.4□□□□□ -2.18
SMOQ99835 Y_RNA.35-201ENST00000362601 101 ntBASIC1.4□□□□□ -2.19
SMOQ99835 RNU6-1325P-201ENST00000364905 105 ntBASIC1.4□□□□□ -2.19
SMOQ99835 SNORD116-21-201ENST00000384507 92 ntBASIC1.4□□□□□ -2.19
SMOQ99835 RNU6-1237P-201ENST00000384777 107 ntBASIC1.4□□□□□ -2.19
SMOQ99835 MT-TN-201ENST00000387400 73 ntBASIC1.4□□□□□ -2.19
SMOQ99835 MIR759-201ENST00000390224 91 ntBASIC1.4□□□□□ -2.19
SMOQ99835 RNU6-613P-201ENST00000410412 108 ntBASIC1.4□□□□□ -2.19
SMOQ99835 RNU4-69P-201ENST00000410677 143 ntBASIC1.4□□□□□ -2.19
SMOQ99835 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.4□□□□□ -2.19
SMOQ99835 RNU1-98P-201ENST00000458992 160 ntBASIC1.4□□□□□ -2.19
SMOQ99835 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.4□□□□□ -2.19
SMOQ99835 AC007012.1-201ENST00000567192 175 ntBASIC1.4□□□□□ -2.19
SMOQ99835 MIR4452-201ENST00000583004 71 ntBASIC1.4□□□□□ -2.19
SMOQ99835 MIR6740-201ENST00000618268 113 ntBASIC1.4□□□□□ -2.19
SMOQ99835 AC087741.2-201ENST00000619415 172 ntBASIC1.4□□□□□ -2.19
SMOQ99835 AL035470.1-201ENST00000622571 220 ntBASIC1.4□□□□□ -2.19
SMOQ99835 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.4□□□□□ -2.19
SMOQ99835 Y_RNA.299-201ENST00000364973 94 ntBASIC1.39□□□□□ -2.19
SMOQ99835 RNU6-215P-201ENST00000365169 102 ntBASIC1.39□□□□□ -2.19
SMOQ99835 Y_RNA.549-201ENST00000384657 102 ntBASIC1.39□□□□□ -2.19
SMOQ99835 MIR4264-201ENST00000583520 66 ntBASIC1.39□□□□□ -2.19
SMOQ99835 MIR3660-201ENST00000584845 100 ntBASIC1.39□□□□□ -2.19
SMOQ99835 AP000753.3-201ENST00000604083 169 ntBASIC1.39□□□□□ -2.19
SMOQ99835 uc_338.6-201ENST00000613544 171 ntBASIC1.39□□□□□ -2.19
SMOQ99835 RNY4P6-201ENST00000363667 96 ntBASIC1.38□□□□□ -2.19
SMOQ99835 Y_RNA.344-201ENST00000365381 112 ntBASIC1.38□□□□□ -2.19
SMOQ99835 MIR548D2-201ENST00000384955 97 ntBASIC1.38□□□□□ -2.19
SMOQ99835 RNU6-910P-201ENST00000390844 107 ntBASIC1.38□□□□□ -2.19
SMOQ99835 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
SMOQ99835 snoU13.2-201ENST00000459201 104 ntBASIC1.38□□□□□ -2.19
SMOQ99835 RMST_2.1-201ENST00000617263 136 ntBASIC1.38□□□□□ -2.19
SMOQ99835 SEPT14P17-201ENST00000617978 177 ntBASIC1.38□□□□□ -2.19
SMOQ99835 Y_RNA.330-201ENST00000365230 109 ntBASIC1.37□□□□□ -2.19
SMOQ99835 Y_RNA.362-201ENST00000365518 110 ntBASIC1.37□□□□□ -2.19
SMOQ99835 Y_RNA.540-201ENST00000384638 111 ntBASIC1.37□□□□□ -2.19
SMOQ99835 MIR588-201ENST00000384900 83 ntBASIC1.37□□□□□ -2.19
SMOQ99835 SNORA40.6-201ENST00000391153 128 ntBASIC1.37□□□□□ -2.19
SMOQ99835 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.37□□□□□ -2.19
SMOQ99835 RNU7-35P-201ENST00000517174 62 ntBASIC1.37□□□□□ -2.19
SMOQ99835 AC068338.1-201ENST00000565567 176 ntBASIC1.37□□□□□ -2.19
SMOQ99835 Y_RNA.773-201ENST00000607168 90 ntBASIC1.37□□□□□ -2.19
SMOQ99835 AL157834.3-201ENST00000615543 103 ntBASIC1.37□□□□□ -2.19
SMOQ99835 AL353770.2-201ENST00000620024 78 ntBASIC1.37□□□□□ -2.19
SMOQ99835 MIR377-201ENST00000362145 69 ntBASIC1.36□□□□□ -2.19
SMOQ99835 RNU6-880P-201ENST00000384526 107 ntBASIC1.36□□□□□ -2.19
SMOQ99835 MIR563-201ENST00000385080 79 ntBASIC1.36□□□□□ -2.19
SMOQ99835 MIR758-201ENST00000390227 88 ntBASIC1.36□□□□□ -2.19
SMOQ99835 RNU7-62P-201ENST00000458856 62 ntBASIC1.36□□□□□ -2.19
SMOQ99835 RNU6-589P-201ENST00000516485 107 ntBASIC1.36□□□□□ -2.19
SMOQ99835 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.36□□□□□ -2.19
SMOQ99835 MIR6779-201ENST00000617283 64 ntBASIC1.36□□□□□ -2.19
SMOQ99835 AL662814.1-201ENST00000617364 121 ntBASIC1.36□□□□□ -2.19
SMOQ99835 SNORD115-19-201ENST00000363098 82 ntBASIC1.35□□□□□ -2.19
SMOQ99835 SNORD115-18-201ENST00000363293 82 ntBASIC1.35□□□□□ -2.19
SMOQ99835 SNORD115-17-201ENST00000364612 82 ntBASIC1.35□□□□□ -2.19
SMOQ99835 RNU6-955P-201ENST00000410497 104 ntBASIC1.35□□□□□ -2.19
SMOQ99835 MIR4679-2-201ENST00000578358 77 ntBASIC1.35□□□□□ -2.19
SMOQ99835 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.35□□□□□ -2.19
SMOQ99835 RNA5SP327-201ENST00000362494 101 ntBASIC1.34□□□□□ -2.19
SMOQ99835 RNU6-392P-201ENST00000364926 101 ntBASIC1.34□□□□□ -2.19
SMOQ99835 RNU6-580P-201ENST00000365159 107 ntBASIC1.34□□□□□ -2.19
SMOQ99835 RNU6-616P-201ENST00000384353 107 ntBASIC1.34□□□□□ -2.19
SMOQ99835 AL591704.2-201ENST00000421658 181 ntBASIC1.34□□□□□ -2.19
SMOQ99835 RNU7-21P-201ENST00000459430 62 ntBASIC1.34□□□□□ -2.19
SMOQ99835 SNORD79.1-201ENST00000516069 84 ntBASIC1.34□□□□□ -2.19
SMOQ99835 RNU7-79P-201ENST00000516082 62 ntBASIC1.34□□□□□ -2.19
SMOQ99835 Y_RNA.709-201ENST00000516952 92 ntBASIC1.34□□□□□ -2.19
SMOQ99835 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.34□□□□□ -2.19
SMOQ99835 AC141846.1-201ENST00000568348 142 ntBASIC1.34□□□□□ -2.19
SMOQ99835 MIR1255B1-201ENST00000636325 63 ntBASIC1.34□□□□□ -2.19
SMOQ99835 SNORD114-26-201ENST00000363543 72 ntBASIC1.33□□□□□ -2.2
SMOQ99835 SNORA63.5-201ENST00000363548 123 ntBASIC1.33□□□□□ -2.2
SMOQ99835 Y_RNA.168-201ENST00000363740 102 ntBASIC1.33□□□□□ -2.2
SMOQ99835 Y_RNA.281-201ENST00000364774 94 ntBASIC1.33□□□□□ -2.2
SMOQ99835 RNY1P13-201ENST00000365030 105 ntBASIC1.33□□□□□ -2.2
SMOQ99835 SNORA80D-201ENST00000384488 135 ntBASIC1.33□□□□□ -2.2
SMOQ99835 SNORA2B-201ENST00000384583 137 ntBASIC1.33□□□□□ -2.2
SMOQ99835 RNY4P18-201ENST00000391107 89 ntBASIC1.33□□□□□ -2.2
SMOQ99835 RNU6-1165P-201ENST00000410119 107 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 167.4 ms