Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 SNORD115-44-201ENST00000365391 82 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 SNORD63-201ENST00000384262 68 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 RNU4-14P-201ENST00000410858 122 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 RNU6-370P-201ENST00000411008 104 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 MTND3P8-201ENST00000412909 339 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 PMCHL1-202ENST00000423102 261 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 SNORA13-201ENST00000458790 133 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 MTND4P17-201ENST00000470444 350 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 SEPT14P8-201ENST00000508026 178 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 C8orf59P2-201ENST00000603441 271 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 SNORD113-5-201ENST00000607261 78 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 AC007485.1-201ENST00000616755 206 ntBASIC-1.08□□□□□ -2.58
LYSMD1Q96S90 MIR20A-201ENST00000362279 71 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 RNU6-502P-201ENST00000362419 108 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 Y_RNA.24-201ENST00000362508 103 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 MIR617-201ENST00000385030 97 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 MIR517B-201ENST00000385102 67 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 SNORD63B-201ENST00000411005 70 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 AC016907.1-201ENST00000419483 435 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 AC093423.1-201ENST00000440817 142 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 Y_RNA.717-201ENST00000517106 92 ntBASIC-1.09□□□□□ -2.58
LYSMD1Q96S90 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 SNORD114-10-201ENST00000363409 72 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.416-201ENST00000384014 113 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 MIR518B-201ENST00000385127 83 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 MIR526A2-201ENST00000390198 65 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 MTND1P34-201ENST00000438556 671 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 AC099799.1-201ENST00000439809 192 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 SNORD22.1-201ENST00000516331 125 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 RNA5SP153-201ENST00000516498 76 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 RPS29P30-201ENST00000600975 111 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 AC011603.4-201ENST00000611325 277 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 uc_338.19-201ENST00000616808 99 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 AC078883.4-201ENST00000623218 367 ntBASIC-1.1□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.9-201ENST00000362354 101 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 RNY4P14-201ENST00000363656 96 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 SNORA51.5-201ENST00000384126 131 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 MTATP6P19-201ENST00000413797 659 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 snoU13.11-201ENST00000459219 104 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 MIR548AE2-201ENST00000583456 67 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 AC097639.2-201ENST00000603159 172 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 AL121655.1-201ENST00000605811 308 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 AC093783.1-201ENST00000612976 329 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.11□□□□□ -2.59
LYSMD1Q96S90 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 RNY3P5-201ENST00000384127 102 ntBASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 RNA5SP144-201ENST00000410846 116 ntBASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 AC098614.3-201ENST00000438957 440 ntBASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 AP000533.3-201ENST00000447704 118 ntBASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 AC022137.1-201ENST00000483735 151 ntBASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 AC048344.4-201ENST00000619744 527 ntBASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 MIR4272-201ENST00000635924 64 ntBASIC-1.12□□□□□ -2.59
LYSMD1Q96S90 SNORD115-25-201ENST00000362619 82 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.573-201ENST00000384763 105 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 MT-TT-201ENST00000387460 66 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 RNU2-16P-201ENST00000410712 136 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 RNU2-55P-201ENST00000411146 174 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 SNRPGP8-201ENST00000454064 226 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 AL500527.2-201ENST00000454105 95 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 MIR2113-201ENST00000459007 91 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 MIR5704-201ENST00000584029 77 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 MIR3974-201ENST00000637126 96 ntBASIC-1.13□□□□□ -2.59
LYSMD1Q96S90 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.602-201ENST00000410535 92 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 AC244090.1-201ENST00000441884 93 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 RNU7-55P-201ENST00000459426 62 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 U8.20-201ENST00000459445 131 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 AC082651.2-201ENST00000496833 166 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 RNA5SP67-201ENST00000516422 131 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 RNU6-699P-201ENST00000517081 110 ntBASIC-1.14□□□□□ -2.59
LYSMD1Q96S90 RNU6-170P-201ENST00000362832 104 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.136-201ENST00000363444 102 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 SNORD113-8-201ENST00000363497 74 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 RNU6-662P-201ENST00000384253 104 ntBASIC-1.15□□□□□ -2.59
LYSMD1Q96S90 RNU6-102P-201ENST00000384485 104 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms