Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC063976.4-201ENST00000421971 163 ntBASIC1.34□□□□□ -2.19
SNX18Q96RF0 RPS29P23-201ENST00000458635 123 ntBASIC1.34□□□□□ -2.19
SNX18Q96RF0 AC023790.1-201ENST00000482174 347 ntBASIC1.34□□□□□ -2.19
SNX18Q96RF0 SNORA31.2-201ENST00000516019 134 ntBASIC1.34□□□□□ -2.19
SNX18Q96RF0 MIR2115-201ENST00000516657 100 ntBASIC1.34□□□□□ -2.19
SNX18Q96RF0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.34□□□□□ -2.19
SNX18Q96RF0 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.34□□□□□ -2.19
SNX18Q96RF0 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
SNX18Q96RF0 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SNX18Q96RF0 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
SNX18Q96RF0 MIR499A-201ENST00000384903 122 ntBASIC1.33□□□□□ -2.2
SNX18Q96RF0 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
SNX18Q96RF0 SNORD77B-201ENST00000391112 67 ntBASIC1.33□□□□□ -2.2
SNX18Q96RF0 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
SNX18Q96RF0 RNA5SP95-201ENST00000410319 137 ntBASIC1.33□□□□□ -2.2
SNX18Q96RF0 MIR4679-2-201ENST00000578358 77 ntBASIC1.33□□□□□ -2.2
SNX18Q96RF0 AP000753.3-201ENST00000604083 169 ntBASIC1.33□□□□□ -2.2
SNX18Q96RF0 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
SNX18Q96RF0 AL589743.1-201ENST00000551932 2712 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 Y_RNA.281-201ENST00000364774 94 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 SNORA25.9-201ENST00000365087 128 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 MIR588-201ENST00000384900 83 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 RNA5SP237-201ENST00000410414 113 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 RNU7-95P-201ENST00000459222 64 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 RNU6-412P-201ENST00000516434 106 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 RNU11-2P-201ENST00000516898 142 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 RNU1-92P-201ENST00000517017 135 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 AL359821.1-201ENST00000605519 182 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 Y_RNA.773-201ENST00000607168 90 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.32□□□□□ -2.2
SNX18Q96RF0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
SNX18Q96RF0 Y_RNA.85-201ENST00000363014 111 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 RNU6-60P-201ENST00000364792 103 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 RNU6-1107P-201ENST00000364817 104 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 RNU6-616P-201ENST00000384353 107 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 RNU6-321P-201ENST00000410912 106 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 RNU6-1086P-201ENST00000410930 100 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 snoU13.2-201ENST00000459201 104 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 RNA5SP61-201ENST00000516453 100 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 MIR4264-201ENST00000583520 66 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 MIR6740-201ENST00000618268 113 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 MIR1255B1-201ENST00000636325 63 ntBASIC1.31□□□□□ -2.2
SNX18Q96RF0 SNORD115-19-201ENST00000363098 82 ntBASIC1.3□□□□□ -2.2
SNX18Q96RF0 SNORD115-18-201ENST00000363293 82 ntBASIC1.3□□□□□ -2.2
SNX18Q96RF0 SNORD115-17-201ENST00000364612 82 ntBASIC1.3□□□□□ -2.2
SNX18Q96RF0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.3□□□□□ -2.2
SNX18Q96RF0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.3□□□□□ -2.2
SNX18Q96RF0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.3□□□□□ -2.2
SNX18Q96RF0 MIR1323-201ENST00000408090 73 ntBASIC1.3□□□□□ -2.2
SNX18Q96RF0 TRMT112P2-201ENST00000512910 132 ntBASIC1.3□□□□□ -2.2
SNX18Q96RF0 RNU7-79P-201ENST00000516082 62 ntBASIC1.3□□□□□ -2.2
SNX18Q96RF0 RNU7-35P-201ENST00000517174 62 ntBASIC1.3□□□□□ -2.2
SNX18Q96RF0 MT-TN-201ENST00000387400 73 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 RNU6-910P-201ENST00000390844 107 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 RNU6-816P-201ENST00000390914 107 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 SNORA75.2-201ENST00000391138 150 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 RNU6-1268P-201ENST00000391214 107 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 SNORA75.3-201ENST00000391231 150 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 RNU6-1239P-201ENST00000391310 107 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 RNU6-613P-201ENST00000410412 108 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 RNU7-62P-201ENST00000458856 62 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 PDCD5P2-201ENST00000507570 312 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 FAM71BP1-201ENST00000604431 523 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 MIR8070-201ENST00000616510 88 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 AL662814.1-201ENST00000617364 121 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 SEPT14P17-201ENST00000617978 177 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 AL162726.3-218ENST00000636401 95 ntBASIC1.29□□□□□ -2.2
SNX18Q96RF0 Y_RNA.49-201ENST00000362714 112 ntBASIC1.28□□□□□ -2.2
SNX18Q96RF0 MIR518E-201ENST00000385252 88 ntBASIC1.28□□□□□ -2.2
SNX18Q96RF0 RPL39P25-201ENST00000449384 154 ntBASIC1.28□□□□□ -2.2
SNX18Q96RF0 RPL39P34-201ENST00000477141 156 ntBASIC1.28□□□□□ -2.2
SNX18Q96RF0 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.28□□□□□ -2.2
SNX18Q96RF0 AC068339.1-201ENST00000526965 141 ntBASIC1.28□□□□□ -2.2
SNX18Q96RF0 AC141846.1-201ENST00000568348 142 ntBASIC1.28□□□□□ -2.2
SNX18Q96RF0 uc_338.28-201ENST00000612082 187 ntBASIC1.28□□□□□ -2.2
SNX18Q96RF0 Y_RNA.116-201ENST00000363292 103 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 U8.6-201ENST00000364939 135 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 Y_RNA.309-201ENST00000365046 111 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 Y_RNA.355-201ENST00000365462 98 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 RNU6-1014P-201ENST00000383940 103 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 SNORA2B-201ENST00000384583 137 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 AL354695.1-201ENST00000427935 228 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 SNORD67.1-201ENST00000516618 108 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 SNORA70.22-201ENST00000517160 124 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 uc_338.6-201ENST00000613544 171 ntBASIC1.27□□□□□ -2.21
SNX18Q96RF0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
SNX18Q96RF0 ZNF209P-201ENST00000593450 2304 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 Y_RNA.155-201ENST00000363632 101 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 SNORA7.1-201ENST00000363750 139 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 RNU4-67P-201ENST00000364569 141 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 RNY1P13-201ENST00000365030 105 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 Y_RNA.466-201ENST00000384294 113 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 SNORA80D-201ENST00000384488 135 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 Y_RNA.507-201ENST00000384500 99 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 RNU6-1165P-201ENST00000410119 107 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 SNORA7.5-201ENST00000410672 110 ntBASIC1.26□□□□□ -2.21
SNX18Q96RF0 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms