Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SNORD111-201ENST00000408139 94 ntBASIC1.81□□□□□ -2.12
ZNF428Q96B54 Y_RNA.629-201ENST00000411368 105 ntBASIC1.81□□□□□ -2.12
ZNF428Q96B54 RNU1-98P-201ENST00000458992 160 ntBASIC1.81□□□□□ -2.12
ZNF428Q96B54 MIR1270-201ENST00000459320 83 ntBASIC1.81□□□□□ -2.12
ZNF428Q96B54 AC025166.1-201ENST00000612411 163 ntBASIC1.81□□□□□ -2.12
ZNF428Q96B54 AL137067.1-201ENST00000615933 120 ntBASIC1.81□□□□□ -2.12
ZNF428Q96B54 RMST_2.1-201ENST00000617263 136 ntBASIC1.81□□□□□ -2.12
ZNF428Q96B54 AL035470.1-201ENST00000622571 220 ntBASIC1.81□□□□□ -2.12
ZNF428Q96B54 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.81□□□□□ -2.12
ZNF428Q96B54 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
ZNF428Q96B54 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
ZNF428Q96B54 RNU6-690P-201ENST00000365242 106 ntBASIC1.8□□□□□ -2.12
ZNF428Q96B54 RNU6-476P-201ENST00000384726 107 ntBASIC1.8□□□□□ -2.12
ZNF428Q96B54 RNY4P18-201ENST00000391107 89 ntBASIC1.8□□□□□ -2.12
ZNF428Q96B54 SNORA26.6-201ENST00000391256 115 ntBASIC1.8□□□□□ -2.12
ZNF428Q96B54 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.8□□□□□ -2.12
ZNF428Q96B54 RPS3AP1-201ENST00000413190 320 ntBASIC1.8□□□□□ -2.12
ZNF428Q96B54 AC019288.1-201ENST00000557918 224 ntBASIC1.8□□□□□ -2.12
ZNF428Q96B54 Y_RNA.81-201ENST00000362997 102 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 Y_RNA.168-201ENST00000363740 102 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 Y_RNA.171-201ENST00000363760 102 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 Y_RNA.191-201ENST00000363972 113 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 Y_RNA.273-201ENST00000364703 102 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 RNY1P6-201ENST00000384193 109 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 RNU6-1144P-201ENST00000384247 104 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 RNU6-939P-201ENST00000384634 107 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 MIR1302-7-201ENST00000408841 72 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 RNU6-1064P-201ENST00000410626 104 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 AL035461.1-201ENST00000421490 332 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 AL512326.2-201ENST00000426359 151 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 MIR6504-201ENST00000613520 61 ntBASIC1.79□□□□□ -2.12
ZNF428Q96B54 RNU6-647P-201ENST00000364243 107 ntBASIC1.78□□□□□ -2.12
ZNF428Q96B54 Y_RNA.528-201ENST00000384575 108 ntBASIC1.78□□□□□ -2.12
ZNF428Q96B54 SNORD113.3-201ENST00000364630 78 ntBASIC1.77□□□□□ -2.13
ZNF428Q96B54 RNA5SP61-201ENST00000516453 100 ntBASIC1.77□□□□□ -2.13
ZNF428Q96B54 RNU6-589P-201ENST00000516485 107 ntBASIC1.77□□□□□ -2.13
ZNF428Q96B54 AC021443.1-201ENST00000604478 211 ntBASIC1.77□□□□□ -2.13
ZNF428Q96B54 MIR26B-201ENST00000362251 77 ntBASIC1.76□□□□□ -2.13
ZNF428Q96B54 Y_RNA.298-201ENST00000364960 107 ntBASIC1.76□□□□□ -2.13
ZNF428Q96B54 RNU6-580P-201ENST00000365159 107 ntBASIC1.76□□□□□ -2.13
ZNF428Q96B54 Y_RNA.470-201ENST00000384307 117 ntBASIC1.76□□□□□ -2.13
ZNF428Q96B54 MIR758-201ENST00000390227 88 ntBASIC1.76□□□□□ -2.13
ZNF428Q96B54 SNORA75.2-201ENST00000391138 150 ntBASIC1.76□□□□□ -2.13
ZNF428Q96B54 SNORA75.3-201ENST00000391231 150 ntBASIC1.76□□□□□ -2.13
ZNF428Q96B54 FABP5P4-201ENST00000437203 171 ntBASIC1.76□□□□□ -2.13
ZNF428Q96B54 MIR6516-201ENST00000630554 81 ntBASIC1.76□□□□□ -2.13
ZNF428Q96B54 SNORA25.3-201ENST00000363205 127 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 SNORD114-27-201ENST00000363766 70 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 Y_RNA.363-201ENST00000365529 113 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 MIR150-201ENST00000385048 84 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 RNA5SP144-201ENST00000410846 116 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 RNU7-164P-201ENST00000459221 62 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 RN7SKP179-201ENST00000516126 217 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 RNU7-40P-201ENST00000516397 64 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 MIR4452-201ENST00000583004 71 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 AC106800.4-201ENST00000614905 153 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 MIR6717-201ENST00000622747 73 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 AC021613.1-201ENST00000623880 111 ntBASIC1.75□□□□□ -2.13
ZNF428Q96B54 Y_RNA.205-201ENST00000364128 113 ntBASIC1.74□□□□□ -2.13
ZNF428Q96B54 MIR1276-201ENST00000408707 83 ntBASIC1.74□□□□□ -2.13
ZNF428Q96B54 AC002429.1-201ENST00000437672 148 ntBASIC1.74□□□□□ -2.13
ZNF428Q96B54 Y_RNA.649-201ENST00000459077 103 ntBASIC1.74□□□□□ -2.13
ZNF428Q96B54 RNA5SP404-201ENST00000517118 132 ntBASIC1.74□□□□□ -2.13
ZNF428Q96B54 MIR4305-201ENST00000583252 102 ntBASIC1.74□□□□□ -2.13
ZNF428Q96B54 AL353770.2-201ENST00000620024 78 ntBASIC1.74□□□□□ -2.13
ZNF428Q96B54 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.74□□□□□ -2.13
ZNF428Q96B54 RNU6-1056P-201ENST00000383996 107 ntBASIC1.73□□□□□ -2.13
ZNF428Q96B54 AC004223.1-201ENST00000479840 271 ntBASIC1.73□□□□□ -2.13
ZNF428Q96B54 Y_RNA.709-201ENST00000516952 92 ntBASIC1.73□□□□□ -2.13
ZNF428Q96B54 MIR3660-201ENST00000584845 100 ntBASIC1.73□□□□□ -2.13
ZNF428Q96B54 AL136317.1-201ENST00000612653 226 ntBASIC1.73□□□□□ -2.13
ZNF428Q96B54 AC012676.2-201ENST00000619258 186 ntBASIC1.73□□□□□ -2.13
ZNF428Q96B54 MIR6515-201ENST00000619843 57 ntBASIC1.73□□□□□ -2.13
ZNF428Q96B54 MIR6841-201ENST00000637129 72 ntBASIC1.73□□□□□ -2.13
ZNF428Q96B54 Y_RNA.344-201ENST00000365381 112 ntBASIC1.72□□□□□ -2.13
ZNF428Q96B54 MIR548A3-201ENST00000385297 97 ntBASIC1.72□□□□□ -2.13
ZNF428Q96B54 RNU6-919P-201ENST00000516731 104 ntBASIC1.72□□□□□ -2.13
ZNF428Q96B54 AL670379.3-201ENST00000605040 251 ntBASIC1.72□□□□□ -2.13
ZNF428Q96B54 MIR96-201ENST00000362288 78 ntBASIC1.71□□□□□ -2.14
ZNF428Q96B54 SNORD114-24-201ENST00000365029 72 ntBASIC1.71□□□□□ -2.14
ZNF428Q96B54 SNORD116-21-201ENST00000384507 92 ntBASIC1.71□□□□□ -2.14
ZNF428Q96B54 RNU6-955P-201ENST00000410497 104 ntBASIC1.71□□□□□ -2.14
ZNF428Q96B54 Y_RNA.773-201ENST00000607168 90 ntBASIC1.71□□□□□ -2.14
ZNF428Q96B54 uc_338.28-201ENST00000612082 187 ntBASIC1.71□□□□□ -2.14
ZNF428Q96B54 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.71□□□□□ -2.14
ZNF428Q96B54 U6.95-201ENST00000636931 70 ntBASIC1.71□□□□□ -2.14
ZNF428Q96B54 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ZNF428Q96B54 AC008163.1-202ENST00000636004 2889 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 Y_RNA.30-201ENST00000362572 97 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 RNU6-153P-201ENST00000364422 104 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 Y_RNA.330-201ENST00000365230 109 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 SNORA22-201ENST00000383907 134 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 AC067940.1-201ENST00000458411 300 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 RNU1-123P-201ENST00000458950 160 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 uc_338.6-201ENST00000613544 171 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 MIR7974-201ENST00000615835 79 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 MIR1255B1-201ENST00000636325 63 ntBASIC1.7□□□□□ -2.14
ZNF428Q96B54 RNU6-342P-201ENST00000384521 104 ntBASIC1.69□□□□□ -2.14
ZNF428Q96B54 RNU6-1307P-201ENST00000391012 103 ntBASIC1.69□□□□□ -2.14
ZNF428Q96B54 AC004812.1-201ENST00000540773 146 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 237.3 ms