Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC069114.2-201ENST00000604699 304 ntBASIC2.67□□□□□ -1.98
NEDD1Q8NHV4 AC010297.1-201ENST00000623948 149 ntBASIC2.67□□□□□ -1.98
NEDD1Q8NHV4 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
NEDD1Q8NHV4 MIR6073-201ENST00000352083 89 ntBASIC2.66□□□□□ -1.98
NEDD1Q8NHV4 RNU6-330P-201ENST00000363015 107 ntBASIC2.66□□□□□ -1.98
NEDD1Q8NHV4 DEFA7P-201ENST00000382676 285 ntBASIC2.66□□□□□ -1.98
NEDD1Q8NHV4 MIR1261-201ENST00000408659 82 ntBASIC2.66□□□□□ -1.98
NEDD1Q8NHV4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.66□□□□□ -1.98
NEDD1Q8NHV4 SNORA31.15-201ENST00000516771 132 ntBASIC2.66□□□□□ -1.98
NEDD1Q8NHV4 AC005786.1-201ENST00000588553 154 ntBASIC2.66□□□□□ -1.98
NEDD1Q8NHV4 AC104996.3-201ENST00000590718 94 ntBASIC2.66□□□□□ -1.98
NEDD1Q8NHV4 RNU6-208P-201ENST00000362431 107 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 SNORD36A-201ENST00000362874 73 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 U8.2-201ENST00000363156 134 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 RNU1-51P-201ENST00000365345 176 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 MIR221-201ENST00000385135 110 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 HSPE1P24-201ENST00000450782 238 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 AC023790.1-201ENST00000482174 347 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 SNORA74.3-201ENST00000517108 154 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 AC138749.4-201ENST00000563970 127 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 AC133485.1-201ENST00000567176 124 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 MIR5094-201ENST00000578766 85 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 MIR548AO-201ENST00000579992 96 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 MIR4536-1-201ENST00000583537 88 ntBASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.65□□□□□ -1.99
NEDD1Q8NHV4 WWP1P1-201ENST00000466609 2769 ntBASIC2.64□□□□□ -1.99
NEDD1Q8NHV4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
NEDD1Q8NHV4 RNU1-91P-201ENST00000364746 163 ntBASIC2.64□□□□□ -1.99
NEDD1Q8NHV4 RNU6-141P-201ENST00000410499 105 ntBASIC2.64□□□□□ -1.99
NEDD1Q8NHV4 snoU13.17-201ENST00000458802 104 ntBASIC2.64□□□□□ -1.99
NEDD1Q8NHV4 RPS27P21-201ENST00000486977 252 ntBASIC2.64□□□□□ -1.99
NEDD1Q8NHV4 MIR4500-201ENST00000579472 76 ntBASIC2.64□□□□□ -1.99
NEDD1Q8NHV4 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NEDD1Q8NHV4 Y_RNA.264-201ENST00000364665 102 ntBASIC2.63□□□□□ -1.99
NEDD1Q8NHV4 SNORA72.6-201ENST00000384520 129 ntBASIC2.63□□□□□ -1.99
NEDD1Q8NHV4 BX276092.1-201ENST00000427368 251 ntBASIC2.63□□□□□ -1.99
NEDD1Q8NHV4 AC011753.1-201ENST00000451001 220 ntBASIC2.63□□□□□ -1.99
NEDD1Q8NHV4 AC099513.1-201ENST00000490423 301 ntBASIC2.63□□□□□ -1.99
NEDD1Q8NHV4 AC021506.2-201ENST00000612354 169 ntBASIC2.63□□□□□ -1.99
NEDD1Q8NHV4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NEDD1Q8NHV4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 Y_RNA.12-201ENST00000362393 112 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 SNORD115-3-201ENST00000363100 82 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 Y_RNA.491-201ENST00000384417 107 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 RNU6-1067P-201ENST00000384752 107 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 MIR154-201ENST00000385243 84 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 AC015818.7-201ENST00000428754 109 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 CYP3A52P-201ENST00000563326 91 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 MIR4648-201ENST00000580107 72 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 AC022202.1-201ENST00000613515 211 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 AL662814.1-201ENST00000617364 121 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 AC008133.2-201ENST00000624540 351 ntBASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.62□□□□□ -1.99
NEDD1Q8NHV4 Y_RNA.36-201ENST00000362602 112 ntBASIC2.61□□□□□ -1.99
NEDD1Q8NHV4 Y_RNA.283-201ENST00000364798 112 ntBASIC2.61□□□□□ -1.99
NEDD1Q8NHV4 RNU6-949P-201ENST00000384040 107 ntBASIC2.61□□□□□ -1.99
NEDD1Q8NHV4 RNU6-571P-201ENST00000384128 107 ntBASIC2.61□□□□□ -1.99
NEDD1Q8NHV4 MIR660-201ENST00000385235 97 ntBASIC2.61□□□□□ -1.99
NEDD1Q8NHV4 MIR524-201ENST00000385242 87 ntBASIC2.61□□□□□ -1.99
NEDD1Q8NHV4 MIR2113-201ENST00000459007 91 ntBASIC2.61□□□□□ -1.99
NEDD1Q8NHV4 RNA5SP445-201ENST00000515889 115 ntBASIC2.61□□□□□ -1.99
NEDD1Q8NHV4 AL161722.3-201ENST00000605789 2983 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 MIRLET7F1-201ENST00000362202 87 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 RNU1-58P-201ENST00000362413 163 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 MIR516A2-201ENST00000384888 90 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 MIR516A1-201ENST00000385033 90 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 BX510359.4-201ENST00000423750 193 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 RNA5SP200-201ENST00000516360 103 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 YWHAEP2-201ENST00000580066 112 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 YWHAEP3-201ENST00000582767 121 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 AC080100.1-201ENST00000624239 5356 ntBASIC2.6□□□□□ -1.99
NEDD1Q8NHV4 RNU1-138P-201ENST00000384093 164 ntBASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 RNU6-950P-201ENST00000384651 107 ntBASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 MIR942-201ENST00000401111 86 ntBASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 RNA5SP181-201ENST00000410246 98 ntBASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 AC027119.1-201ENST00000440877 241 ntBASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 RNA5SP437-201ENST00000517249 129 ntBASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 MIR4764-201ENST00000580680 88 ntBASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 AL513423.1-201ENST00000621695 132 ntBASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 MIR6873-201ENST00000622788 63 ntBASIC2.59□□□□□ -1.99
NEDD1Q8NHV4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.59□□□□□ -2
NEDD1Q8NHV4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
NEDD1Q8NHV4 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
NEDD1Q8NHV4 RNA5SP393-201ENST00000363423 117 ntBASIC2.58□□□□□ -2
NEDD1Q8NHV4 SNORA67.1-201ENST00000364749 141 ntBASIC2.58□□□□□ -2
NEDD1Q8NHV4 AC093423.1-201ENST00000440817 142 ntBASIC2.58□□□□□ -2
NEDD1Q8NHV4 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.58□□□□□ -2
NEDD1Q8NHV4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NEDD1Q8NHV4 SNORA8.1-201ENST00000384250 140 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 260.5 ms