Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AC016907.1-201ENST00000419483 435 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 AC006006.1-201ENST00000603082 144 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 AC092794.1-201ENST00000612734 582 ntBASIC-0.76□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 RNY1P2-201ENST00000364820 117 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 RNU6-662P-201ENST00000384253 104 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 snoU13.11-201ENST00000459219 104 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 AC114755.3-201ENST00000481111 251 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 RNA5SP67-201ENST00000516422 131 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 MIR548H5-201ENST00000580314 60 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 AC105081.1-201ENST00000617727 106 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 snoU18.1-201ENST00000629629 71 ntBASIC-0.77□□□□□ -2.53
CCDC112Q8NEF3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 RNU6-623P-201ENST00000363143 105 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 RNU6-449P-201ENST00000383914 107 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 RNY3P5-201ENST00000384127 102 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 SNORD115-46-201ENST00000390982 71 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 AL589823.1-201ENST00000429577 183 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 Z83846.1-201ENST00000446798 265 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 RNU6-893P-201ENST00000458841 100 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 AC040926.1-201ENST00000530195 238 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 MIR4432-201ENST00000581823 84 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 MIR376A1-201ENST00000616574 68 ntBASIC-0.78□□□□□ -2.53
CCDC112Q8NEF3 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.79□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.79□□□□□ -2.54
CCDC112Q8NEF3 RNU6-480P-201ENST00000384332 107 ntBASIC-0.79□□□□□ -2.54
CCDC112Q8NEF3 MT-TT-201ENST00000387460 66 ntBASIC-0.79□□□□□ -2.54
CCDC112Q8NEF3 AL731563.1-201ENST00000442202 214 ntBASIC-0.79□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.79□□□□□ -2.54
CCDC112Q8NEF3 AC084781.2-201ENST00000615568 161 ntBASIC-0.79□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.8□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.8□□□□□ -2.54
CCDC112Q8NEF3 RNU4-63P-201ENST00000411313 118 ntBASIC-0.8□□□□□ -2.54
CCDC112Q8NEF3 MTND4P19-201ENST00000446659 478 ntBASIC-0.8□□□□□ -2.54
CCDC112Q8NEF3 RNU7-152P-201ENST00000458982 64 ntBASIC-0.8□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.81□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.81□□□□□ -2.54
CCDC112Q8NEF3 SNORA25.7-201ENST00000364375 127 ntBASIC-0.81□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.81□□□□□ -2.54
CCDC112Q8NEF3 RNU6-429P-201ENST00000384582 108 ntBASIC-0.81□□□□□ -2.54
CCDC112Q8NEF3 TRAJ51-201ENST00000504127 63 ntBASIC-0.81□□□□□ -2.54
CCDC112Q8NEF3 RNU7-137P-201ENST00000516788 62 ntBASIC-0.81□□□□□ -2.54
CCDC112Q8NEF3 AL365205.2-201ENST00000594586 68 ntBASIC-0.81□□□□□ -2.54
CCDC112Q8NEF3 AC098479.1-201ENST00000609225 154 ntBASIC-0.81□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.152-201ENST00000363578 100 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 RNU4-16P-201ENST00000364737 141 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 RNU4-70P-201ENST00000384579 139 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 MIR599-201ENST00000385069 95 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 SNORA27.4-201ENST00000516650 95 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 SCARNA15-202ENST00000516881 127 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 RNU7-70P-201ENST00000516941 66 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 MIR3920-201ENST00000581751 86 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 AL359881.1-201ENST00000602916 267 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 RNU7-10P-201ENST00000607194 63 ntBASIC-0.82□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 RNU6-326P-201ENST00000365480 107 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 MIR635-201ENST00000384830 98 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 MT-TL1-201ENST00000386347 75 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 FGF7P6-202ENST00000451282 293 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 MTND4LP30-201ENST00000454092 297 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 RNU6-277P-201ENST00000516272 106 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 SNORD67.1-201ENST00000516618 108 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 RNU7-188P-201ENST00000517063 64 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 AC096720.1-201ENST00000604441 183 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 AL627230.5-201ENST00000619807 58 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 AL391099.1-201ENST00000624635 187 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 AC073869.6-201ENST00000640656 341 ntBASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.83□□□□□ -2.54
CCDC112Q8NEF3 SNORD115-2-201ENST00000362842 82 ntBASIC-0.84□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.84□□□□□ -2.54
CCDC112Q8NEF3 SNORD115-20-201ENST00000365099 82 ntBASIC-0.84□□□□□ -2.54
CCDC112Q8NEF3 RNU6-290P-201ENST00000365212 101 ntBASIC-0.84□□□□□ -2.54
CCDC112Q8NEF3 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.84□□□□□ -2.54
CCDC112Q8NEF3 SNORA53-201ENST00000391141 249 ntBASIC-0.84□□□□□ -2.54
CCDC112Q8NEF3 AL606845.1-201ENST00000404881 255 ntBASIC-0.84□□□□□ -2.54
CCDC112Q8NEF3 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.84□□□□□ -2.54
CCDC112Q8NEF3 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.84□□□□□ -2.54
CCDC112Q8NEF3 SNORD114-10-201ENST00000363409 72 ntBASIC-0.85□□□□□ -2.55
CCDC112Q8NEF3 RNU1-141P-201ENST00000364623 158 ntBASIC-0.85□□□□□ -2.55
CCDC112Q8NEF3 RNU6-211P-201ENST00000384047 107 ntBASIC-0.85□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms