Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.97□□□□□ -2.09
TTC9BQ8N6N2 SNORD3E-202ENST00000627253 216 ntBASIC1.97□□□□□ -2.09
TTC9BQ8N6N2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 RNU6-950P-201ENST00000384651 107 ntBASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 MIR29C-201ENST00000385231 88 ntBASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 RNU7-79P-201ENST00000516082 62 ntBASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 RNU7-35P-201ENST00000517174 62 ntBASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 AL513043.2-201ENST00000573941 143 ntBASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 MIR4709-201ENST00000577272 72 ntBASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 MIR4712-201ENST00000583750 82 ntBASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 MIR8065-201ENST00000620577 100 ntBASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
TTC9BQ8N6N2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 Y_RNA.565-201ENST00000384719 101 ntBASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 MIR181B2-201ENST00000385004 89 ntBASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 RNU6-613P-201ENST00000410412 108 ntBASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 MTND5P40-201ENST00000559945 246 ntBASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 RNU6-90P-201ENST00000606352 106 ntBASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 AC012676.2-201ENST00000619258 186 ntBASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
TTC9BQ8N6N2 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 RNU4-52P-201ENST00000384209 138 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 MIR518A2-201ENST00000384966 87 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 MIR660-201ENST00000385235 97 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 SNORA17.3-201ENST00000391159 129 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 MIR1283-2-201ENST00000408621 87 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 RNU6-602P-201ENST00000411155 105 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 RPS27P21-201ENST00000486977 252 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 AC139453.2-201ENST00000487255 133 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 AC099513.1-201ENST00000490423 301 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 RNU7-137P-201ENST00000516788 62 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TTC9BQ8N6N2 Y_RNA.537-201ENST00000384626 109 ntBASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 MIR520A-201ENST00000384862 85 ntBASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 MIR519C-201ENST00000385053 87 ntBASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 AC027119.1-201ENST00000440877 241 ntBASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 snoU13.16-201ENST00000459350 104 ntBASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 RNA5SP458-201ENST00000516188 119 ntBASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 RNU1-40P-201ENST00000516816 164 ntBASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 RNU1-97P-201ENST00000516872 164 ntBASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 MIR8055-201ENST00000610739 97 ntBASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
TTC9BQ8N6N2 RNA5SP276-201ENST00000362580 94 ntBASIC1.92□□□□□ -2.1
TTC9BQ8N6N2 RNU7-48P-201ENST00000458875 63 ntBASIC1.92□□□□□ -2.1
TTC9BQ8N6N2 snoU13.27-201ENST00000459278 104 ntBASIC1.92□□□□□ -2.1
TTC9BQ8N6N2 RNU7-153P-201ENST00000516455 62 ntBASIC1.92□□□□□ -2.1
TTC9BQ8N6N2 CYP3A52P-201ENST00000563326 91 ntBASIC1.92□□□□□ -2.1
TTC9BQ8N6N2 AC008133.2-201ENST00000624540 351 ntBASIC1.92□□□□□ -2.1
TTC9BQ8N6N2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.92□□□□□ -2.1
TTC9BQ8N6N2 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
TTC9BQ8N6N2 AL161722.3-201ENST00000605789 2983 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 RNU4-32P-201ENST00000363404 141 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 RNA5SP37-201ENST00000365420 130 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 RNU6-1067P-201ENST00000384752 107 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 RNA5SP501-201ENST00000410990 112 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 AL161932.1-201ENST00000437408 146 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 RNA5SP233-201ENST00000459153 113 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 SNORD13-201ENST00000459299 104 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 SNORA74.3-201ENST00000517108 154 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 MIR548AO-201ENST00000579992 96 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 AL513423.1-201ENST00000621695 132 ntBASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.91□□□□□ -2.1
TTC9BQ8N6N2 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
TTC9BQ8N6N2 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.1
TTC9BQ8N6N2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 RNU6-1229P-201ENST00000364295 107 ntBASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 SNORA2B-201ENST00000384583 137 ntBASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 RNA5SP450-201ENST00000411206 102 ntBASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 AC093729.1-201ENST00000513074 128 ntBASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 RNA5SP445-201ENST00000515889 115 ntBASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 MIR514B-201ENST00000516774 80 ntBASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 MIR4764-201ENST00000580680 88 ntBASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 Z97988.1-201ENST00000637697 135 ntBASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
TTC9BQ8N6N2 RNU6-112P-201ENST00000363599 104 ntBASIC1.89□□□□□ -2.11
TTC9BQ8N6N2 Y_RNA.168-201ENST00000363740 102 ntBASIC1.89□□□□□ -2.11
TTC9BQ8N6N2 SNORD115-37-201ENST00000363768 82 ntBASIC1.89□□□□□ -2.11
TTC9BQ8N6N2 Y_RNA.173-201ENST00000363776 113 ntBASIC1.89□□□□□ -2.11
TTC9BQ8N6N2 RNY1P13-201ENST00000365030 105 ntBASIC1.89□□□□□ -2.11
TTC9BQ8N6N2 RNA5SP190-201ENST00000365222 118 ntBASIC1.89□□□□□ -2.11
TTC9BQ8N6N2 Y_RNA.338-201ENST00000365320 114 ntBASIC1.89□□□□□ -2.11
TTC9BQ8N6N2 RNU6-296P-201ENST00000384608 107 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 135.8 ms