Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
CCDC116Q8IYX3 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.56□□□□□ -2
CCDC116Q8IYX3 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC116Q8IYX3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
CCDC116Q8IYX3 MIR30D-201ENST00000362283 70 ntBASIC2.56□□□□□ -2
CCDC116Q8IYX3 MIR516A2-201ENST00000384888 90 ntBASIC2.56□□□□□ -2
CCDC116Q8IYX3 MIR516A1-201ENST00000385033 90 ntBASIC2.56□□□□□ -2
CCDC116Q8IYX3 SNORD41-201ENST00000386967 70 ntBASIC2.56□□□□□ -2
CCDC116Q8IYX3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.56□□□□□ -2
CCDC116Q8IYX3 RNU6-1254P-201ENST00000391266 104 ntBASIC2.56□□□□□ -2
CCDC116Q8IYX3 AL138827.1-201ENST00000402666 306 ntBASIC2.56□□□□□ -2
CCDC116Q8IYX3 MIR1302-7-201ENST00000408841 72 ntBASIC2.56□□□□□ -2
CCDC116Q8IYX3 AC067747.1-201ENST00000608026 250 ntBASIC2.56□□□□□ -2
CCDC116Q8IYX3 AL161722.3-201ENST00000605789 2983 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 Y_RNA.283-201ENST00000364798 112 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 RNU6-396P-201ENST00000365369 105 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 Y_RNA.532-201ENST00000384590 113 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 RNU6-243P-201ENST00000391140 107 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 RNU6-75P-201ENST00000515944 104 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 RNU6-871P-201ENST00000516122 100 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 AC079600.2-201ENST00000550076 130 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 MIR3945-201ENST00000581853 98 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 MIR4672-201ENST00000583126 81 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 AC104996.3-201ENST00000590718 94 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
CCDC116Q8IYX3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.55□□□□□ -2
CCDC116Q8IYX3 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
CCDC116Q8IYX3 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC116Q8IYX3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC116Q8IYX3 RNU6-132P-201ENST00000383863 107 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 MIR635-201ENST00000384830 98 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 MIR513A1-201ENST00000385138 129 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 RNU6-1165P-201ENST00000410119 107 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 RNU6-922P-201ENST00000516753 99 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 RNU6-1015P-201ENST00000517121 99 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 AC121758.2-201ENST00000553271 193 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 MIR3064-201ENST00000581130 66 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 MIR4484-201ENST00000582855 83 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 MIR4264-201ENST00000583520 66 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 AL357312.1-201ENST00000603879 298 ntBASIC2.54□□□□□ -2
CCDC116Q8IYX3 SNORA6-201ENST00000384033 151 ntBASIC2.53□□□□□ -2
CCDC116Q8IYX3 MIR144-201ENST00000384886 86 ntBASIC2.53□□□□□ -2
CCDC116Q8IYX3 SNORD77.2-201ENST00000391045 68 ntBASIC2.53□□□□□ -2
CCDC116Q8IYX3 RNU6-807P-201ENST00000516805 107 ntBASIC2.53□□□□□ -2
CCDC116Q8IYX3 SNORA31.25-201ENST00000517242 134 ntBASIC2.53□□□□□ -2
CCDC116Q8IYX3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.53□□□□□ -2
CCDC116Q8IYX3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC116Q8IYX3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC116Q8IYX3 SNORA25.3-201ENST00000363205 127 ntBASIC2.52□□□□□ -2.01
CCDC116Q8IYX3 RNA5SP21-201ENST00000410917 96 ntBASIC2.52□□□□□ -2.01
CCDC116Q8IYX3 RNU7-62P-201ENST00000458856 62 ntBASIC2.52□□□□□ -2.01
CCDC116Q8IYX3 RNU6-448P-201ENST00000517052 107 ntBASIC2.52□□□□□ -2.01
CCDC116Q8IYX3 MIR5694-201ENST00000581190 76 ntBASIC2.52□□□□□ -2.01
CCDC116Q8IYX3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC116Q8IYX3 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 Y_RNA.491-201ENST00000384417 107 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 MIR548U-201ENST00000390728 81 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 RNU6-205P-201ENST00000390858 107 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 RNU6-466P-201ENST00000391224 103 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 AL161935.2-201ENST00000414627 60 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 AC245517.4-201ENST00000448601 281 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 GTF3AP2-201ENST00000557014 266 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 MIR4529-201ENST00000578110 78 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 MIR4635-201ENST00000583759 79 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 SNORD92-201ENST00000585078 85 ntBASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
CCDC116Q8IYX3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC116Q8IYX3 MIR449A-201ENST00000362113 91 ntBASIC2.5□□□□□ -2.01
CCDC116Q8IYX3 SNORA3A-201ENST00000364113 130 ntBASIC2.5□□□□□ -2.01
CCDC116Q8IYX3 MIR520H-201ENST00000385126 88 ntBASIC2.5□□□□□ -2.01
CCDC116Q8IYX3 RNU6-70P-201ENST00000516438 60 ntBASIC2.5□□□□□ -2.01
CCDC116Q8IYX3 MIR1297-201ENST00000637311 77 ntBASIC2.5□□□□□ -2.01
CCDC116Q8IYX3 Z82195.2-201ENST00000612348 18351 ntBASIC2.5□□□□□ -2.01
CCDC116Q8IYX3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC116Q8IYX3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC116Q8IYX3 Y_RNA.264-201ENST00000364665 102 ntBASIC2.49□□□□□ -2.01
CCDC116Q8IYX3 MT-TF-201ENST00000387314 71 ntBASIC2.49□□□□□ -2.01
CCDC116Q8IYX3 Y_RNA.681-201ENST00000516445 113 ntBASIC2.49□□□□□ -2.01
CCDC116Q8IYX3 uc_338.6-201ENST00000613544 171 ntBASIC2.49□□□□□ -2.01
CCDC116Q8IYX3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC116Q8IYX3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 MIRLET7F1-201ENST00000362202 87 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 RNU6-208P-201ENST00000362431 107 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 MIR9-1-201ENST00000385198 89 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 MT-TN-201ENST00000387400 73 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 RNA5SP210-201ENST00000391034 120 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 AC015818.7-201ENST00000428754 109 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 RNU7-106P-201ENST00000459514 67 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 MIR2115-201ENST00000516657 100 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 RNU6-531P-201ENST00000516694 104 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 RNU7-193P-201ENST00000516723 65 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 MIR4435-1-201ENST00000582552 80 ntBASIC2.48□□□□□ -2.01
CCDC116Q8IYX3 AL033523.1-201ENST00000605153 153 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 262.8 ms