Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 MIR3192-201ENST00000584920 77 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 PRELID3BP2-201ENST00000605362 201 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 AL096861.1-201ENST00000610899 123 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 AC105081.1-201ENST00000617727 106 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 SEPT14P17-201ENST00000617978 177 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 MIR6132-201ENST00000622083 109 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 AC131280.1-202ENST00000624067 4211 ntBASIC2.02□□□□□ -2.09
UBE3DQ7Z6J8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 RNA5SP138-201ENST00000365098 114 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 RNU6-1276P-201ENST00000365372 104 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 SNORA67.3-201ENST00000384366 140 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 SNORA64-201ENST00000384674 134 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 RN7SKP223-201ENST00000410582 62 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 AC244023.1-201ENST00000426884 112 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 AL356320.1-201ENST00000429616 163 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 SNORA44.1-201ENST00000517031 108 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 MIR1273D-201ENST00000577266 86 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 AP000942.3-201ENST00000603702 160 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 AC242498.1-201ENST00000604134 111 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 AC012676.2-201ENST00000619258 186 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 AL359851.1-201ENST00000569460 4997 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 ZNF658B-202ENST00000615961 3375 ntBASIC2.01□□□□□ -2.09
UBE3DQ7Z6J8 RNU6-979P-201ENST00000383896 107 ntBASIC2□□□□□ -2.09
UBE3DQ7Z6J8 MIR1302-7-201ENST00000408841 72 ntBASIC2□□□□□ -2.09
UBE3DQ7Z6J8 RNA5SP508-201ENST00000411327 119 ntBASIC2□□□□□ -2.09
UBE3DQ7Z6J8 AL133373.1-201ENST00000497098 94 ntBASIC2□□□□□ -2.09
UBE3DQ7Z6J8 MTND5P40-201ENST00000559945 246 ntBASIC2□□□□□ -2.09
UBE3DQ7Z6J8 MIR5588-201ENST00000581890 63 ntBASIC2□□□□□ -2.09
UBE3DQ7Z6J8 SNORA4-201ENST00000584302 138 ntBASIC2□□□□□ -2.09
UBE3DQ7Z6J8 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 AL596028.1-201ENST00000326971 197 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 SNORA16B-201ENST00000364674 135 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 Y_RNA.426-201ENST00000384068 113 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 MIR588-201ENST00000384900 83 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 MT-TF-201ENST00000387314 71 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 AL161932.1-201ENST00000437408 146 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 AC027119.1-201ENST00000440877 241 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 RNU7-171P-201ENST00000459581 62 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 RN7SL274P-201ENST00000492268 272 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 MIR6873-201ENST00000622788 63 ntBASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.99□□□□□ -2.09
UBE3DQ7Z6J8 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
UBE3DQ7Z6J8 RNU6-497P-201ENST00000365316 104 ntBASIC1.98□□□□□ -2.09
UBE3DQ7Z6J8 RNU4-52P-201ENST00000384209 138 ntBASIC1.98□□□□□ -2.09
UBE3DQ7Z6J8 RPL30P7-201ENST00000479312 323 ntBASIC1.98□□□□□ -2.09
UBE3DQ7Z6J8 AC090255.1-201ENST00000495779 349 ntBASIC1.98□□□□□ -2.09
UBE3DQ7Z6J8 AP003716.2-201ENST00000528260 108 ntBASIC1.98□□□□□ -2.09
UBE3DQ7Z6J8 MIR4435-1-201ENST00000582552 80 ntBASIC1.98□□□□□ -2.09
UBE3DQ7Z6J8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
UBE3DQ7Z6J8 RNA5SP160-201ENST00000364866 120 ntBASIC1.97□□□□□ -2.09
UBE3DQ7Z6J8 RNA5SP37-201ENST00000365420 130 ntBASIC1.97□□□□□ -2.09
UBE3DQ7Z6J8 RNA5SP425-201ENST00000410336 112 ntBASIC1.97□□□□□ -2.09
UBE3DQ7Z6J8 MIR4299-201ENST00000577899 72 ntBASIC1.97□□□□□ -2.09
UBE3DQ7Z6J8 AC008163.1-202ENST00000636004 2889 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 RNU6-633P-201ENST00000362612 103 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 RNU6-509P-201ENST00000363519 107 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 RNA5SP126-201ENST00000365092 109 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 MIR30A-201ENST00000385092 71 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 RNU6-613P-201ENST00000410412 108 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 HMGN2P38-201ENST00000423806 265 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 RNA5SP445-201ENST00000515889 115 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 MIR4666B-201ENST00000578142 81 ntBASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.96□□□□□ -2.1
UBE3DQ7Z6J8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 MIR302D-201ENST00000362275 68 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 Y_RNA.73-201ENST00000362910 113 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 RNU6-1124P-201ENST00000384169 107 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 SNORA2B-201ENST00000384583 137 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 RNY1P4-201ENST00000384595 115 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 MIR17-201ENST00000385012 84 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 RNU6-1165P-201ENST00000410119 107 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 SNRPGP12-201ENST00000449481 213 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 snoU13.9-201ENST00000458927 103 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 RNU1-98P-201ENST00000458992 160 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 Y_RNA.783-201ENST00000613546 102 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 MIR6740-201ENST00000618268 113 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 MIR219B-201ENST00000637023 88 ntBASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
UBE3DQ7Z6J8 MIR30D-201ENST00000362283 70 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 RNU6-228P-201ENST00000362700 106 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 RNU6-571P-201ENST00000384128 107 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 RNU7-62P-201ENST00000458856 62 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 RNA5SP233-201ENST00000459153 113 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 AL513043.2-201ENST00000573941 143 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 MIR4513-201ENST00000581077 86 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 AC103810.8-201ENST00000607347 118 ntBASIC1.94□□□□□ -2.1
UBE3DQ7Z6J8 AC025521.1-201ENST00000621624 286 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 312.8 ms