Protein–RNA interactions for Protein: Q70EL4

USP43, Ubiquitin carboxyl-terminal hydrolase 43, humanhuman

Predictions only

Length 1,123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP43Q70EL4 Y_RNA.191-201ENST00000363972 113 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 RNU6-1163P-201ENST00000364516 107 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 RNU6-424P-201ENST00000384367 105 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 RNY1P4-201ENST00000384595 115 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 U8.15-201ENST00000390947 134 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.5□□□□□ -2.17
USP43Q70EL4 AC090844.1-201ENST00000422019 156 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 AL035398.1-201ENST00000430869 322 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 AC008834.1-201ENST00000511612 175 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 Y_RNA.659-201ENST00000515994 113 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 RNU7-181P-201ENST00000517234 74 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.5□□□□□ -2.17
USP43Q70EL4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.5□□□□□ -2.17
USP43Q70EL4 AC084768.2-201ENST00000622736 221 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 AC245060.5-201ENST00000610778 3293 ntBASIC1.5□□□□□ -2.17
USP43Q70EL4 RNU6-633P-201ENST00000362612 103 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 RNU6-833P-201ENST00000363486 107 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 RNU6-509P-201ENST00000363519 107 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 Y_RNA.241-201ENST00000364470 117 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 Y_RNA.299-201ENST00000364973 94 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 RNU6-652P-201ENST00000365488 107 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 Y_RNA.426-201ENST00000384068 113 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 Y_RNA.430-201ENST00000384081 110 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 RNU6-296P-201ENST00000384608 107 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 U8.16-201ENST00000391279 133 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 MIR934-201ENST00000401241 83 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 RNU6-1190P-201ENST00000410811 104 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 AC015922.2-201ENST00000435593 184 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.49□□□□□ -2.17
USP43Q70EL4 SNORD13-201ENST00000459299 104 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 RNU6-250P-201ENST00000516958 103 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 AC090821.2-201ENST00000523552 176 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.49□□□□□ -2.17
USP43Q70EL4 MIR4439-201ENST00000583746 80 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 SEPT14P17-201ENST00000617978 177 ntBASIC1.49□□□□□ -2.17
USP43Q70EL4 RNU6-112P-201ENST00000363599 104 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 SNORD115-27-201ENST00000364430 82 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 Y_RNA.316-201ENST00000365118 111 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 SNORA24-201ENST00000384096 131 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 RNU6-163P-201ENST00000384396 106 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 RNU6-950P-201ENST00000384651 107 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 RNU6-1031P-201ENST00000384773 107 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 SNORA17.3-201ENST00000391159 129 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 AL034345.1-201ENST00000407768 123 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 RNU6-613P-201ENST00000410412 108 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 AC003989.2-201ENST00000440224 169 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 RNU7-113P-201ENST00000459273 62 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 RNA5SP168-201ENST00000516642 112 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 RNA5SP437-201ENST00000517249 129 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 AL359821.1-201ENST00000605519 182 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 AC020891.4-201ENST00000605745 93 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 MIR376B-201ENST00000614515 100 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 MIR4662A-201ENST00000637499 67 ntBASIC1.48□□□□□ -2.17
USP43Q70EL4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
USP43Q70EL4 SNORA22.1-201ENST00000362701 134 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 SNORD116-10-201ENST00000363791 102 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 RNU6-457P-201ENST00000363999 107 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 RNU6-1229P-201ENST00000364295 107 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 MIR520A-201ENST00000384862 85 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 MIR9-3-201ENST00000385084 90 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 RNU6-913P-201ENST00000390913 95 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 Y_RNA.611-201ENST00000410682 108 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 RNU6-321P-201ENST00000410912 106 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.47□□□□□ -2.17
USP43Q70EL4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.47□□□□□ -2.17
USP43Q70EL4 MIR502-201ENST00000606349 86 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 AC103810.7-201ENST00000607821 91 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 MIR6717-201ENST00000622747 73 ntBASIC1.47□□□□□ -2.17
USP43Q70EL4 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
USP43Q70EL4 AP000648.3-201ENST00000623539 4507 ntBASIC1.46□□□□□ -2.18
USP43Q70EL4 Y_RNA.96-201ENST00000363092 109 ntBASIC1.46□□□□□ -2.18
USP43Q70EL4 AP1B1P2-201ENST00000416196 106 ntBASIC1.46□□□□□ -2.18
USP43Q70EL4 AC099513.1-201ENST00000490423 301 ntBASIC1.46□□□□□ -2.18
USP43Q70EL4 RPS29P11-201ENST00000496507 171 ntBASIC1.46□□□□□ -2.18
USP43Q70EL4 TRMT112P2-201ENST00000512910 132 ntBASIC1.46□□□□□ -2.18
USP43Q70EL4 RNA5SP33-201ENST00000516687 98 ntBASIC1.46□□□□□ -2.18
USP43Q70EL4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.46□□□□□ -2.18
USP43Q70EL4 RNU6-86P-201ENST00000606534 107 ntBASIC1.46□□□□□ -2.18
USP43Q70EL4 MIR7111-201ENST00000619751 72 ntBASIC1.46□□□□□ -2.18
USP43Q70EL4 RNU6-524P-201ENST00000384270 107 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 MIR499A-201ENST00000384903 122 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 RNU6-788P-201ENST00000390967 104 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 SNORD28B-201ENST00000390993 75 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 MIR1267-201ENST00000408723 78 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 Y_RNA.607-201ENST00000410597 98 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 RNA5SP100-201ENST00000410903 110 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 RNA5SP59-201ENST00000410922 110 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 RNU7-34P-201ENST00000459394 64 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.45□□□□□ -2.18
USP43Q70EL4 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 AC021506.2-201ENST00000612354 169 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 MIR7974-201ENST00000615835 79 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 AL512310.12-203ENST00000640543 90 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 ICE2P2-201ENST00000483823 2787 ntBASIC1.45□□□□□ -2.18
USP43Q70EL4 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
USP43Q70EL4 RNU6-1244P-201ENST00000363614 108 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 265.2 ms