Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
TTC39AQ5SRH9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.21□□□□□ -2.22
TTC39AQ5SRH9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
TTC39AQ5SRH9 Y_RNA.528-201ENST00000384575 108 ntBASIC1.2□□□□□ -2.22
TTC39AQ5SRH9 RNU6-1237P-201ENST00000384777 107 ntBASIC1.2□□□□□ -2.22
TTC39AQ5SRH9 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
TTC39AQ5SRH9 RMST_2.1-201ENST00000617263 136 ntBASIC1.2□□□□□ -2.22
TTC39AQ5SRH9 SEPT14P17-201ENST00000617978 177 ntBASIC1.2□□□□□ -2.22
TTC39AQ5SRH9 MIR6734-201ENST00000621166 68 ntBASIC1.2□□□□□ -2.22
TTC39AQ5SRH9 AL391516.1-201ENST00000554380 2449 ntBASIC1.2□□□□□ -2.22
TTC39AQ5SRH9 RNU6-342P-201ENST00000384521 104 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 Y_RNA.531-201ENST00000384589 121 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 SNORA22C-201ENST00000384614 134 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 MT-TI-201ENST00000387365 69 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 AC008267.6-201ENST00000441664 139 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 AC113410.1-201ENST00000505029 247 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 RNA5SP33-201ENST00000516687 98 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 RNU11-2P-201ENST00000516898 142 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 AC023827.1-201ENST00000569247 97 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 AC025166.1-201ENST00000612411 163 ntBASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
TTC39AQ5SRH9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 MTND5P18-201ENST00000445624 1801 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 Y_RNA.354-201ENST00000365448 111 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 SNORA32-201ENST00000384072 121 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 SNORA2B-201ENST00000384583 137 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 MIRLET7F2-201ENST00000385277 83 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 RNU6-1154P-201ENST00000391001 104 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 RNU6-613P-201ENST00000410412 108 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 RNU6-893P-201ENST00000458841 100 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 RNU7-21P-201ENST00000459430 62 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 SNORD79.1-201ENST00000516069 84 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 RNU6-62P-201ENST00000516526 102 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 AP000753.3-201ENST00000604083 169 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 uc_338.6-201ENST00000613544 171 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 MIR6740-201ENST00000618268 113 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 AC008163.1-202ENST00000636004 2889 ntBASIC1.18□□□□□ -2.22
TTC39AQ5SRH9 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
TTC39AQ5SRH9 SNORA18-201ENST00000384416 132 ntBASIC1.17□□□□□ -2.22
TTC39AQ5SRH9 SNORA80D-201ENST00000384488 135 ntBASIC1.17□□□□□ -2.22
TTC39AQ5SRH9 MIR588-201ENST00000384900 83 ntBASIC1.17□□□□□ -2.22
TTC39AQ5SRH9 RNU6-1168P-201ENST00000390831 104 ntBASIC1.17□□□□□ -2.22
TTC39AQ5SRH9 Y_RNA.712-201ENST00000517011 92 ntBASIC1.17□□□□□ -2.22
TTC39AQ5SRH9 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
TTC39AQ5SRH9 MIR548AE2-201ENST00000583456 67 ntBASIC1.17□□□□□ -2.22
TTC39AQ5SRH9 MIR3914-2-201ENST00000637339 95 ntBASIC1.17□□□□□ -2.22
TTC39AQ5SRH9 RNU6-735P-201ENST00000410612 107 ntBASIC1.16□□□□□ -2.22
TTC39AQ5SRH9 RNA5SP136-201ENST00000410906 107 ntBASIC1.16□□□□□ -2.22
TTC39AQ5SRH9 RNU7-62P-201ENST00000458856 62 ntBASIC1.16□□□□□ -2.22
TTC39AQ5SRH9 snoU13.2-201ENST00000459201 104 ntBASIC1.16□□□□□ -2.22
TTC39AQ5SRH9 snoU13.21-201ENST00000459368 105 ntBASIC1.16□□□□□ -2.22
TTC39AQ5SRH9 SNORD33.1-201ENST00000516213 88 ntBASIC1.16□□□□□ -2.22
TTC39AQ5SRH9 MIR4264-201ENST00000583520 66 ntBASIC1.16□□□□□ -2.22
TTC39AQ5SRH9 SNORA25-201ENST00000384384 134 ntBASIC1.15□□□□□ -2.23
TTC39AQ5SRH9 MIR520E-201ENST00000384867 87 ntBASIC1.15□□□□□ -2.23
TTC39AQ5SRH9 MT-TN-201ENST00000387400 73 ntBASIC1.15□□□□□ -2.23
TTC39AQ5SRH9 RNU6-313P-201ENST00000516317 112 ntBASIC1.15□□□□□ -2.23
TTC39AQ5SRH9 AC036111.3-201ENST00000526389 112 ntBASIC1.15□□□□□ -2.23
TTC39AQ5SRH9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.15□□□□□ -2.23
TTC39AQ5SRH9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
TTC39AQ5SRH9 SNORD115-2-201ENST00000362842 82 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 Y_RNA.198-201ENST00000364013 98 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 SNORD115-20-201ENST00000365099 82 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 RNU2-51P-201ENST00000410708 197 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 MRPL35P3-201ENST00000421557 364 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 MIR1270-201ENST00000459320 83 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 COX6CP6-201ENST00000490840 228 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 RNU6-479P-201ENST00000516348 105 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 RNU6-94P-201ENST00000607728 107 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 MIR6788-201ENST00000618842 66 ntBASIC1.14□□□□□ -2.23
TTC39AQ5SRH9 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 Y_RNA.346-201ENST00000365385 112 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 MIR532-201ENST00000385025 91 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 RNA5SP237-201ENST00000410414 113 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 AC002429.1-201ENST00000437672 148 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 RNU7-90P-201ENST00000459216 62 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 RNU7-6P-201ENST00000516845 62 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 RNU6-1223P-201ENST00000517124 104 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 MIR151B-201ENST00000584249 96 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 AC103810.9-201ENST00000606688 112 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 AC027335.2-201ENST00000624030 375 ntBASIC1.13□□□□□ -2.23
TTC39AQ5SRH9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 MIR377-201ENST00000362145 69 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 Y_RNA.168-201ENST00000363740 102 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 SNORD113.3-201ENST00000364630 78 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 RNA5SP205-201ENST00000364653 136 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 RNU6-580P-201ENST00000365159 107 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 RNU6-1165P-201ENST00000410119 107 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 RNU4-69P-201ENST00000410677 143 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 AC015818.7-201ENST00000428754 109 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 AC087499.7-201ENST00000441958 109 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 RPS29P1-201ENST00000465274 159 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 AL359881.1-201ENST00000602916 267 ntBASIC1.12□□□□□ -2.23
TTC39AQ5SRH9 AL662814.1-201ENST00000617364 121 ntBASIC1.12□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms