Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RNU7-43P-201ENST00000516554 64 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 AC068339.1-201ENST00000526965 141 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 MIR3152-201ENST00000579801 74 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 AL357312.1-201ENST00000603879 298 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 AC008133.2-201ENST00000624540 351 ntBASIC1.58□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.191-201ENST00000363972 113 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 RNU6-756P-201ENST00000383997 107 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 SNORA51.5-201ENST00000384126 131 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 SNORA19.1-201ENST00000410656 129 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 RNU7-73P-201ENST00000458743 63 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 RNU1-123P-201ENST00000458950 160 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 RPL30P7-201ENST00000479312 323 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 RPS23P4-201ENST00000487908 423 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 RNA5SP33-201ENST00000516687 98 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 RN7SKP88-201ENST00000516847 250 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 MIR5009-201ENST00000578736 100 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 MIR4452-201ENST00000583004 71 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 7SK.8-201ENST00000612110 250 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 7SK.11-201ENST00000615477 250 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 7SK.13-201ENST00000622040 250 ntBASIC1.57□□□□□ -2.16
SLC44A4Q53GD3 SNORA25.3-201ENST00000363205 127 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 RNU6-32P-201ENST00000383948 107 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 RNU6-13P-201ENST00000384248 107 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 RNU6-49P-201ENST00000384256 107 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 RNU6-12P-201ENST00000384604 107 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 RNU6-41P-201ENST00000384741 107 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 RNU6-1067P-201ENST00000384752 107 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 MIR1323-201ENST00000408090 73 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 MIR1302-5-201ENST00000408164 150 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 MIR1270-201ENST00000459320 83 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 RNU6-94P-201ENST00000607728 107 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 MIR8055-201ENST00000610739 97 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 MIR1255B1-201ENST00000636325 63 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 MIR6841-201ENST00000637129 72 ntBASIC1.56□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.328-201ENST00000365208 113 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 MIR488-201ENST00000365739 83 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 RNY4P30-201ENST00000410216 95 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 snoU13.16-201ENST00000459350 104 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 AC113410.1-201ENST00000505029 247 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 RNA5SP102-201ENST00000516865 106 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 RNU6-537P-201ENST00000517277 103 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 MIR548AE2-201ENST00000583456 67 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 AL353770.2-201ENST00000620024 78 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 AL162726.3-218ENST00000636401 95 ntBASIC1.55□□□□□ -2.16
SLC44A4Q53GD3 RNU6-766P-201ENST00000362478 107 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 RNU6-816P-201ENST00000390914 107 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 RNU4-69P-201ENST00000410677 143 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 AC090844.1-201ENST00000422019 156 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 RPL39P25-201ENST00000449384 154 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 RPL39P39-201ENST00000455840 151 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 RNU6-109P-201ENST00000516364 107 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 RNU6-184P-201ENST00000516514 107 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 MIR548AO-201ENST00000579992 96 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 MIR4251-201ENST00000635819 61 ntBASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
SLC44A4Q53GD3 SNORD115-2-201ENST00000362842 82 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 SNORA1.1-201ENST00000364671 133 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 SNORD115-20-201ENST00000365099 82 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.388-201ENST00000383919 113 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 SNORA32-201ENST00000384072 121 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 RNU6-42P-201ENST00000384165 107 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 MIR590-201ENST00000385008 97 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 RPS3AP1-201ENST00000413190 320 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 AC048334.1-201ENST00000477975 159 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 Y_RNA.677-201ENST00000516401 85 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 RNU6-762P-201ENST00000517107 102 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 AP001318.4-201ENST00000616637 121 ntBASIC1.53□□□□□ -2.16
SLC44A4Q53GD3 SNORD73B-201ENST00000364394 72 ntBASIC1.52□□□□□ -2.17
SLC44A4Q53GD3 RNU6-1131P-201ENST00000364955 107 ntBASIC1.52□□□□□ -2.17
SLC44A4Q53GD3 Y_RNA.369-201ENST00000365568 117 ntBASIC1.52□□□□□ -2.17
SLC44A4Q53GD3 Y_RNA.430-201ENST00000384081 110 ntBASIC1.52□□□□□ -2.17
SLC44A4Q53GD3 RNA5SP261-201ENST00000410536 106 ntBASIC1.52□□□□□ -2.17
SLC44A4Q53GD3 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
SLC44A4Q53GD3 RNU6-893P-201ENST00000458841 100 ntBASIC1.52□□□□□ -2.17
SLC44A4Q53GD3 AC141557.1-201ENST00000540982 400 ntBASIC1.52□□□□□ -2.17
SLC44A4Q53GD3 AC006254.2-201ENST00000603259 279 ntBASIC1.52□□□□□ -2.17
SLC44A4Q53GD3 Y_RNA.299-201ENST00000364973 94 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 RNU6-616P-201ENST00000384353 107 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 RNU6-342P-201ENST00000384521 104 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 RNU6-602P-201ENST00000411155 105 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 AC245047.7-201ENST00000440265 293 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 SNORA31.2-201ENST00000516019 134 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 Y_RNA.694-201ENST00000516677 117 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 AL078603.1-201ENST00000603824 313 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SLC44A4Q53GD3 SNORD115-19-201ENST00000363098 82 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 SNORD115-18-201ENST00000363293 82 ntBASIC1.5□□□□□ -2.17
SLC44A4Q53GD3 SNORD115-17-201ENST00000364612 82 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms