Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 Y_RNA.198-201ENST00000364013 98 ntBASIC1.45□□□□□ -2.18
ATP2B3Q16720 Y_RNA.549-201ENST00000384657 102 ntBASIC1.45□□□□□ -2.18
ATP2B3Q16720 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.45□□□□□ -2.18
ATP2B3Q16720 snoU13.21-201ENST00000459368 105 ntBASIC1.45□□□□□ -2.18
ATP2B3Q16720 RNU7-6P-201ENST00000516845 62 ntBASIC1.45□□□□□ -2.18
ATP2B3Q16720 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.45□□□□□ -2.18
ATP2B3Q16720 AL670379.3-201ENST00000605040 251 ntBASIC1.45□□□□□ -2.18
ATP2B3Q16720 AL035470.1-201ENST00000622571 220 ntBASIC1.45□□□□□ -2.18
ATP2B3Q16720 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.45□□□□□ -2.18
ATP2B3Q16720 RNU6-476P-201ENST00000384726 107 ntBASIC1.44□□□□□ -2.18
ATP2B3Q16720 AC023827.1-201ENST00000569247 97 ntBASIC1.44□□□□□ -2.18
ATP2B3Q16720 Y_RNA.35-201ENST00000362601 101 ntBASIC1.43□□□□□ -2.18
ATP2B3Q16720 Y_RNA.213-201ENST00000364178 111 ntBASIC1.43□□□□□ -2.18
ATP2B3Q16720 MIR588-201ENST00000384900 83 ntBASIC1.43□□□□□ -2.18
ATP2B3Q16720 RNU6-1064P-201ENST00000410626 104 ntBASIC1.43□□□□□ -2.18
ATP2B3Q16720 RNA5SP247-201ENST00000411181 105 ntBASIC1.43□□□□□ -2.18
ATP2B3Q16720 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.43□□□□□ -2.18
ATP2B3Q16720 MIR2115-201ENST00000516657 100 ntBASIC1.43□□□□□ -2.18
ATP2B3Q16720 Y_RNA.773-201ENST00000607168 90 ntBASIC1.43□□□□□ -2.18
ATP2B3Q16720 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
ATP2B3Q16720 SNORD115-2-201ENST00000362842 82 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 Y_RNA.226-201ENST00000364337 114 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 SNORD115-20-201ENST00000365099 82 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 Y_RNA.344-201ENST00000365381 112 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 RNU6-1144P-201ENST00000384247 104 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 SNORD20-201ENST00000384550 80 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 SNORA2B-201ENST00000384583 137 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 MIR1276-201ENST00000408707 83 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 AC015818.7-201ENST00000428754 109 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 AC087499.7-201ENST00000441958 109 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 RNU7-62P-201ENST00000458856 62 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 RNA5SP102-201ENST00000516865 106 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 SEPT14P17-201ENST00000617978 177 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 AC087741.2-201ENST00000619415 172 ntBASIC1.42□□□□□ -2.18
ATP2B3Q16720 RNU6-613P-201ENST00000410412 108 ntBASIC1.41□□□□□ -2.18
ATP2B3Q16720 snoU13.2-201ENST00000459201 104 ntBASIC1.41□□□□□ -2.18
ATP2B3Q16720 AP000753.3-201ENST00000604083 169 ntBASIC1.41□□□□□ -2.18
ATP2B3Q16720 MIR1255B1-201ENST00000636325 63 ntBASIC1.41□□□□□ -2.18
ATP2B3Q16720 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ATP2B3Q16720 SNORA25.9-201ENST00000365087 128 ntBASIC1.4□□□□□ -2.19
ATP2B3Q16720 Y_RNA.354-201ENST00000365448 111 ntBASIC1.4□□□□□ -2.19
ATP2B3Q16720 RNU6-1056P-201ENST00000383996 107 ntBASIC1.4□□□□□ -2.19
ATP2B3Q16720 SNORD116-21-201ENST00000384507 92 ntBASIC1.4□□□□□ -2.19
ATP2B3Q16720 RNU4-69P-201ENST00000410677 143 ntBASIC1.4□□□□□ -2.19
ATP2B3Q16720 RNU6-893P-201ENST00000458841 100 ntBASIC1.4□□□□□ -2.19
ATP2B3Q16720 AC007012.1-201ENST00000567192 175 ntBASIC1.4□□□□□ -2.19
ATP2B3Q16720 MIR3163-201ENST00000581592 73 ntBASIC1.4□□□□□ -2.19
ATP2B3Q16720 MIR4264-201ENST00000583520 66 ntBASIC1.4□□□□□ -2.19
ATP2B3Q16720 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.4□□□□□ -2.19
ATP2B3Q16720 AL589743.1-201ENST00000551932 2712 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
ATP2B3Q16720 SNORA63.5-201ENST00000363548 123 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 Y_RNA.273-201ENST00000364703 102 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 RNU6-1325P-201ENST00000364905 105 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 Y_RNA.362-201ENST00000365518 110 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 RNU6-616P-201ENST00000384353 107 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 MIR548D2-201ENST00000384955 97 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 RNU6-1086P-201ENST00000410930 100 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 Y_RNA.629-201ENST00000411368 105 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 SNORD79.1-201ENST00000516069 84 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 RNU6-94P-201ENST00000607728 107 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 AC008163.1-202ENST00000636004 2889 ntBASIC1.39□□□□□ -2.19
ATP2B3Q16720 MIR499A-201ENST00000384903 122 ntBASIC1.38□□□□□ -2.19
ATP2B3Q16720 MIR222-201ENST00000384992 110 ntBASIC1.38□□□□□ -2.19
ATP2B3Q16720 RNA5SP237-201ENST00000410414 113 ntBASIC1.38□□□□□ -2.19
ATP2B3Q16720 RNU7-21P-201ENST00000459430 62 ntBASIC1.38□□□□□ -2.19
ATP2B3Q16720 RNU11-2P-201ENST00000516898 142 ntBASIC1.38□□□□□ -2.19
ATP2B3Q16720 AC036111.3-201ENST00000526389 112 ntBASIC1.38□□□□□ -2.19
ATP2B3Q16720 AC141846.1-201ENST00000568348 142 ntBASIC1.38□□□□□ -2.19
ATP2B3Q16720 AL662814.1-201ENST00000617364 121 ntBASIC1.38□□□□□ -2.19
ATP2B3Q16720 SNORA25.8-201ENST00000364831 128 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 RNY1P13-201ENST00000365030 105 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 MT-TN-201ENST00000387400 73 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 MIR759-201ENST00000390224 91 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 RNU6-1307P-201ENST00000391012 103 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 RNU6-1165P-201ENST00000410119 107 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 SNORD83.1-201ENST00000411362 77 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.37□□□□□ -2.19
ATP2B3Q16720 RNU7-79P-201ENST00000516082 62 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 SNORD67.1-201ENST00000516618 108 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 SNORA70.22-201ENST00000517160 124 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 RNU7-35P-201ENST00000517174 62 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 AC105081.1-201ENST00000617727 106 ntBASIC1.37□□□□□ -2.19
ATP2B3Q16720 MIR30D-201ENST00000362283 70 ntBASIC1.36□□□□□ -2.19
ATP2B3Q16720 MIR96-201ENST00000362288 78 ntBASIC1.36□□□□□ -2.19
ATP2B3Q16720 RNU6-215P-201ENST00000365169 102 ntBASIC1.36□□□□□ -2.19
ATP2B3Q16720 MIR563-201ENST00000385080 79 ntBASIC1.36□□□□□ -2.19
ATP2B3Q16720 MIR1287-201ENST00000408492 90 ntBASIC1.36□□□□□ -2.19
ATP2B3Q16720 AL591704.2-201ENST00000421658 181 ntBASIC1.36□□□□□ -2.19
ATP2B3Q16720 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.36□□□□□ -2.19
ATP2B3Q16720 MIR4295-201ENST00000585286 85 ntBASIC1.36□□□□□ -2.19
ATP2B3Q16720 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
ATP2B3Q16720 RNU6-939P-201ENST00000384634 107 ntBASIC1.35□□□□□ -2.19
ATP2B3Q16720 MIR618-201ENST00000385287 98 ntBASIC1.35□□□□□ -2.19
ATP2B3Q16720 MIR1285-1-201ENST00000408593 84 ntBASIC1.35□□□□□ -2.19
ATP2B3Q16720 MIR6504-201ENST00000613520 61 ntBASIC1.35□□□□□ -2.19
ATP2B3Q16720 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
ATP2B3Q16720 RNY4P6-201ENST00000363667 96 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 223.1 ms