Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 RNU7-80P-201ENST00000459562 61 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 RNU6-1212P-201ENST00000517023 104 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 MIR548AO-201ENST00000579992 96 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 AC025627.3-201ENST00000582078 182 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 AC131055.1-201ENST00000584626 316 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 MIR3658-201ENST00000636291 56 ntBASIC0.66□□□□□ -2.3
PTCH1Q13635 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.66□□□□□ -2.3
PTCH1Q13635 RNU6-1130P-201ENST00000365434 107 ntBASIC0.65□□□□□ -2.3
PTCH1Q13635 RNU6-449P-201ENST00000383914 107 ntBASIC0.65□□□□□ -2.3
PTCH1Q13635 Y_RNA.497-201ENST00000384447 98 ntBASIC0.65□□□□□ -2.3
PTCH1Q13635 RNU6-913P-201ENST00000390913 95 ntBASIC0.65□□□□□ -2.3
PTCH1Q13635 U7.7-201ENST00000459276 60 ntBASIC0.65□□□□□ -2.3
PTCH1Q13635 RNU7-53P-201ENST00000516705 60 ntBASIC0.65□□□□□ -2.3
PTCH1Q13635 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.65□□□□□ -2.3
PTCH1Q13635 Y_RNA.778-201ENST00000620203 90 ntBASIC0.65□□□□□ -2.3
PTCH1Q13635 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
PTCH1Q13635 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
PTCH1Q13635 MTND5P32-201ENST00000560711 1802 ntBASIC0.65□□□□□ -2.31
PTCH1Q13635 MIR103A2-201ENST00000362154 78 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 MIR342-201ENST00000362212 99 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 Y_RNA.8-201ENST00000362353 102 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 Y_RNA.52-201ENST00000362760 96 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNU6-151P-201ENST00000364158 107 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNU6-396P-201ENST00000365369 105 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 Y_RNA.398-201ENST00000383952 99 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 Y_RNA.454-201ENST00000384224 113 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 Y_RNA.488-201ENST00000384403 102 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 SNORD37.2-201ENST00000391075 66 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 AC114737.2-201ENST00000421583 173 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 AC113410.1-201ENST00000505029 247 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNU6-1149P-201ENST00000516810 97 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 AC112693.2-201ENST00000556538 232 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 DLEU2_5.2-201ENST00000610606 84 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 SEPT14P17-201ENST00000617978 177 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 AC091932.4-201ENST00000623386 200 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 AC021753.1-201ENST00000635724 168 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 AC023934.1-201ENST00000574529 2389 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 MIR302B-201ENST00000362188 73 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNY1P11-201ENST00000363759 113 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNU6-1319P-201ENST00000390855 104 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNU6-747P-201ENST00000390928 104 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNU6-241P-201ENST00000391148 104 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNU6-177P-201ENST00000411257 104 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 AC244023.1-201ENST00000426884 112 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNA5SP236-201ENST00000516169 116 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 MTND5P41-201ENST00000517498 206 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 AC242498.1-201ENST00000604134 111 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 MIR6516-201ENST00000630554 81 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 Z97988.1-201ENST00000637697 135 ntBASIC0.64□□□□□ -2.31
PTCH1Q13635 RNU4-11P-201ENST00000365287 132 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 SNORD116-18-201ENST00000383961 92 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 Y_RNA.400-201ENST00000383963 111 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 RNU6-209P-201ENST00000384118 107 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 Y_RNA.584-201ENST00000391090 114 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 SNORA26.6-201ENST00000391256 115 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 AC090844.1-201ENST00000422019 156 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 RNU7-197P-201ENST00000458836 62 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 RNU7-70P-201ENST00000516941 66 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 RNU2-60P-201ENST00000517290 128 ntBASIC0.63□□□□□ -2.31
PTCH1Q13635 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.63□□□□□ -2.31
PTCH1Q13635 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
PTCH1Q13635 AL596211.1-201ENST00000569873 2277 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 MIR409-201ENST00000362237 79 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 SNORA9.1-201ENST00000362412 131 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 Y_RNA.215-201ENST00000364204 112 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 RNU4-67P-201ENST00000364569 141 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 Y_RNA.430-201ENST00000384081 110 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 RNU6-125P-201ENST00000384505 107 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 SNORD38B-201ENST00000384690 67 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 MT-TN-201ENST00000387400 73 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 SNORD89-201ENST00000390981 114 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 RNU6-613P-201ENST00000410412 108 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 RNU6-602P-201ENST00000411155 105 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.62□□□□□ -2.31
PTCH1Q13635 RNU7-200P-201ENST00000516105 62 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 MIR2115-201ENST00000516657 100 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 RNU6-255P-201ENST00000516957 105 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 AC023827.1-201ENST00000569247 97 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 MIR548X2-201ENST00000579776 100 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 MIR3152-201ENST00000579801 74 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 MIR4802-201ENST00000581881 80 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.62□□□□□ -2.31
PTCH1Q13635 MIR6717-201ENST00000622747 73 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 SNORD38B-202ENST00000625943 69 ntBASIC0.62□□□□□ -2.31
PTCH1Q13635 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.62□□□□□ -2.31
PTCH1Q13635 RNU6-349P-201ENST00000362402 107 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 Y_RNA.120-201ENST00000363304 110 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 RNU6-309P-201ENST00000364573 106 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 SNORA1.1-201ENST00000364671 133 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 RNU6-580P-201ENST00000365159 107 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 SNORD18B-201ENST00000365659 72 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 MIR513C-201ENST00000401352 84 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 AL603914.1-201ENST00000401964 204 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 RNA5SP261-201ENST00000410536 106 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 RNU6-1190P-201ENST00000410811 104 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 MTATP6P21-201ENST00000440681 189 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 AC067940.1-201ENST00000458411 300 ntBASIC0.61□□□□□ -2.31
PTCH1Q13635 RNU7-45P-201ENST00000459460 63 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 189.4 ms