Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RNU6-1088P-201ENST00000516850 104 ntBASIC-2.14□□□□□ -2.75
HIST1H1AQ02539 RNU7-70P-201ENST00000516941 66 ntBASIC-2.14□□□□□ -2.75
HIST1H1AQ02539 Y_RNA.91-201ENST00000363042 107 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 RNU6-99P-201ENST00000364721 107 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 RNU6-1248P-201ENST00000391096 64 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 RNU6-592P-201ENST00000411333 103 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 SEPT14P3-201ENST00000439401 183 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 AL732372.2-207ENST00000445840 183 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 SEPT14P2-201ENST00000453405 183 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 RNU7-106P-201ENST00000459514 67 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 RPS29P25-201ENST00000481709 171 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 SEPT14P4-201ENST00000513445 186 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 RNU6-864P-201ENST00000516256 108 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 RNU6-566P-201ENST00000516790 107 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 FO082796.1-201ENST00000523795 183 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 MIR4724-201ENST00000579485 89 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 AC006504.6-201ENST00000590142 199 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 TPTEP1-208ENST00000636884 213 ntBASIC-2.15□□□□□ -2.75
HIST1H1AQ02539 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.16□□□□□ -2.76
HIST1H1AQ02539 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.16□□□□□ -2.76
HIST1H1AQ02539 RNU6-226P-201ENST00000363778 107 ntBASIC-2.16□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.215-201ENST00000364204 112 ntBASIC-2.16□□□□□ -2.76
HIST1H1AQ02539 RNU6-1050P-201ENST00000410388 107 ntBASIC-2.16□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.618-201ENST00000410949 107 ntBASIC-2.16□□□□□ -2.76
HIST1H1AQ02539 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-2.16□□□□□ -2.76
HIST1H1AQ02539 RNU7-113P-201ENST00000459273 62 ntBASIC-2.16□□□□□ -2.76
HIST1H1AQ02539 RNU6-1085P-201ENST00000363576 107 ntBASIC-2.17□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.229-201ENST00000364347 113 ntBASIC-2.17□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.383-201ENST00000383855 97 ntBASIC-2.17□□□□□ -2.76
HIST1H1AQ02539 MIR527-201ENST00000385244 85 ntBASIC-2.17□□□□□ -2.76
HIST1H1AQ02539 AC021146.9-201ENST00000512503 156 ntBASIC-2.17□□□□□ -2.76
HIST1H1AQ02539 MIR4520-1-201ENST00000582609 70 ntBASIC-2.17□□□□□ -2.76
HIST1H1AQ02539 SNORD115-20-201ENST00000365099 82 ntBASIC-2.18□□□□□ -2.76
HIST1H1AQ02539 MIR582-201ENST00000365731 98 ntBASIC-2.18□□□□□ -2.76
HIST1H1AQ02539 RNU6-763P-201ENST00000390865 106 ntBASIC-2.18□□□□□ -2.76
HIST1H1AQ02539 RNU6-1321P-201ENST00000390905 107 ntBASIC-2.18□□□□□ -2.76
HIST1H1AQ02539 RNU6-332P-201ENST00000391193 108 ntBASIC-2.18□□□□□ -2.76
HIST1H1AQ02539 MIR889-201ENST00000401280 79 ntBASIC-2.18□□□□□ -2.76
HIST1H1AQ02539 AL365203.2-201ENST00000423444 196 ntBASIC-2.18□□□□□ -2.76
HIST1H1AQ02539 AC107027.2-201ENST00000512197 115 ntBASIC-2.18□□□□□ -2.76
HIST1H1AQ02539 AC073114.1-201ENST00000612027 490 ntBASIC-2.18□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.19□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.19□□□□□ -2.76
HIST1H1AQ02539 RNU6-484P-201ENST00000384016 107 ntBASIC-2.19□□□□□ -2.76
HIST1H1AQ02539 MIR124-2-201ENST00000385081 109 ntBASIC-2.19□□□□□ -2.76
HIST1H1AQ02539 AC097510.1-201ENST00000510945 133 ntBASIC-2.19□□□□□ -2.76
HIST1H1AQ02539 RNU6-1299P-201ENST00000516316 100 ntBASIC-2.19□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.86-201ENST00000363020 111 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.105-201ENST00000363182 111 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.437-201ENST00000384113 113 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.462-201ENST00000384268 102 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 MIR548E-201ENST00000408287 88 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 RNU6-1016P-201ENST00000516689 94 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 RNU7-110P-201ENST00000516891 62 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 MIR3129-201ENST00000581095 76 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 AC133104.2-201ENST00000615272 193 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 U6.92-201ENST00000636464 89 ntBASIC-2.2□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.542-201ENST00000384641 111 ntBASIC-2.21□□□□□ -2.76
HIST1H1AQ02539 MIR620-201ENST00000385232 95 ntBASIC-2.21□□□□□ -2.76
HIST1H1AQ02539 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-2.21□□□□□ -2.76
HIST1H1AQ02539 RNU6-576P-201ENST00000390854 102 ntBASIC-2.21□□□□□ -2.76
HIST1H1AQ02539 RNA5SP144-201ENST00000410846 116 ntBASIC-2.21□□□□□ -2.76
HIST1H1AQ02539 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-2.21□□□□□ -2.76
HIST1H1AQ02539 RNU7-48P-201ENST00000458875 63 ntBASIC-2.21□□□□□ -2.76
HIST1H1AQ02539 AC005899.2-201ENST00000584353 90 ntBASIC-2.21□□□□□ -2.76
HIST1H1AQ02539 AC013791.1-201ENST00000616619 62 ntBASIC-2.21□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.413-201ENST00000384007 102 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 MIR548K-201ENST00000408406 116 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.754-201ENST00000476024 102 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 RNA5SP153-201ENST00000516498 76 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 AC245505.1-201ENST00000556398 224 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 MIR548AE2-201ENST00000583456 67 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 AC097639.2-201ENST00000603159 172 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.790-201ENST00000614282 102 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.782-201ENST00000614695 102 ntBASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.22□□□□□ -2.76
HIST1H1AQ02539 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.23□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.120-201ENST00000363304 110 ntBASIC-2.23□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.23□□□□□ -2.77
HIST1H1AQ02539 RNU6-1163P-201ENST00000364516 107 ntBASIC-2.23□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.447-201ENST00000384184 113 ntBASIC-2.23□□□□□ -2.77
HIST1H1AQ02539 RNU2-55P-201ENST00000411146 174 ntBASIC-2.23□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.693-201ENST00000516641 110 ntBASIC-2.23□□□□□ -2.77
HIST1H1AQ02539 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC-2.23□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.98-201ENST00000363109 102 ntBASIC-2.24□□□□□ -2.77
HIST1H1AQ02539 SNORD115-23-201ENST00000364461 82 ntBASIC-2.24□□□□□ -2.77
HIST1H1AQ02539 RNU6-1013P-201ENST00000384180 107 ntBASIC-2.24□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.601-201ENST00000410500 113 ntBASIC-2.24□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.616-201ENST00000410835 95 ntBASIC-2.24□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.655-201ENST00000515919 96 ntBASIC-2.24□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.708-201ENST00000516950 96 ntBASIC-2.24□□□□□ -2.77
HIST1H1AQ02539 MIR4790-201ENST00000577799 79 ntBASIC-2.24□□□□□ -2.77
HIST1H1AQ02539 AL353803.5-201ENST00000599815 141 ntBASIC-2.24□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.23-201ENST00000362496 106 ntBASIC-2.25□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.25□□□□□ -2.77
HIST1H1AQ02539 RNU5E-4P-201ENST00000364931 120 ntBASIC-2.25□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.577-201ENST00000384794 101 ntBASIC-2.25□□□□□ -2.77
HIST1H1AQ02539 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.25□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms