Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 7SK.8-201ENST00000612110 250 ntBASIC1.41□□□□□ -2.18
E2F1Q01094 7SK.11-201ENST00000615477 250 ntBASIC1.41□□□□□ -2.18
E2F1Q01094 7SK.13-201ENST00000622040 250 ntBASIC1.41□□□□□ -2.18
E2F1Q01094 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
E2F1Q01094 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.41□□□□□ -2.18
E2F1Q01094 Y_RNA.495-201ENST00000384435 112 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 Y_RNA.528-201ENST00000384575 108 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 RNU6-1104P-201ENST00000384723 104 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 MIR320A-201ENST00000385302 82 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 MIR1185-1-201ENST00000408598 86 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.4□□□□□ -2.19
E2F1Q01094 AC023790.1-201ENST00000482174 347 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 RNU6-537P-201ENST00000517277 103 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 MIR4452-201ENST00000583004 71 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 SNORA4-201ENST00000584302 138 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 PRELID3BP2-201ENST00000605362 201 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 MIR8065-201ENST00000620577 100 ntBASIC1.4□□□□□ -2.19
E2F1Q01094 RNA5SP264-201ENST00000363115 107 ntBASIC1.39□□□□□ -2.19
E2F1Q01094 Y_RNA.171-201ENST00000363760 102 ntBASIC1.39□□□□□ -2.19
E2F1Q01094 Y_RNA.531-201ENST00000384589 121 ntBASIC1.39□□□□□ -2.19
E2F1Q01094 AL512326.2-201ENST00000426359 151 ntBASIC1.39□□□□□ -2.19
E2F1Q01094 AC245047.7-201ENST00000440265 293 ntBASIC1.39□□□□□ -2.19
E2F1Q01094 RNU6-109P-201ENST00000516364 107 ntBASIC1.39□□□□□ -2.19
E2F1Q01094 RNU6-184P-201ENST00000516514 107 ntBASIC1.39□□□□□ -2.19
E2F1Q01094 AC004812.1-201ENST00000540773 146 ntBASIC1.39□□□□□ -2.19
E2F1Q01094 AL670379.3-201ENST00000605040 251 ntBASIC1.39□□□□□ -2.19
E2F1Q01094 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
E2F1Q01094 MIR103A2-201ENST00000362154 78 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 SNORD115-2-201ENST00000362842 82 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 Y_RNA.198-201ENST00000364013 98 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 SNORD73B-201ENST00000364394 72 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 SNORD115-20-201ENST00000365099 82 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 Y_RNA.354-201ENST00000365448 111 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 RNU6-42P-201ENST00000384165 107 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 RNY1P7-201ENST00000384743 110 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 Y_RNA.649-201ENST00000459077 103 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 RNU7-113P-201ENST00000459273 62 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 AC113410.1-201ENST00000505029 247 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 RNA5SP102-201ENST00000516865 106 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 RNU11-2P-201ENST00000516898 142 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 AC022523.2-201ENST00000561045 150 ntBASIC1.38□□□□□ -2.19
E2F1Q01094 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.38□□□□□ -2.19
E2F1Q01094 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
E2F1Q01094 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.37□□□□□ -2.19
E2F1Q01094 Y_RNA.328-201ENST00000365208 113 ntBASIC1.37□□□□□ -2.19
E2F1Q01094 RNU6-396P-201ENST00000365369 105 ntBASIC1.37□□□□□ -2.19
E2F1Q01094 SNORD38B-201ENST00000384690 67 ntBASIC1.37□□□□□ -2.19
E2F1Q01094 MIR548A3-201ENST00000385297 97 ntBASIC1.37□□□□□ -2.19
E2F1Q01094 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.37□□□□□ -2.19
E2F1Q01094 AC048334.1-201ENST00000477975 159 ntBASIC1.37□□□□□ -2.19
E2F1Q01094 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.37□□□□□ -2.19
E2F1Q01094 SNORD38B-202ENST00000625943 69 ntBASIC1.37□□□□□ -2.19
E2F1Q01094 Y_RNA.213-201ENST00000364178 111 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 Y_RNA.281-201ENST00000364774 94 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 U8.6-201ENST00000364939 135 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 RNU6-1131P-201ENST00000364955 107 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 Y_RNA.470-201ENST00000384307 117 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 RNU6-955P-201ENST00000410497 104 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 RNU6-592P-201ENST00000411333 103 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 RPS23P4-201ENST00000487908 423 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 RNA5SP220-201ENST00000516298 104 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 MIR2115-201ENST00000516657 100 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 AL161722.3-201ENST00000605789 2983 ntBASIC1.36□□□□□ -2.19
E2F1Q01094 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
E2F1Q01094 Y_RNA.85-201ENST00000363014 111 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 RNU6-1107P-201ENST00000364817 104 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 RNY4P30-201ENST00000410216 95 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 AC244023.1-201ENST00000426884 112 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 MIR1270-201ENST00000459320 83 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.35□□□□□ -2.19
E2F1Q01094 AL078603.1-201ENST00000603824 313 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 AC242498.1-201ENST00000604134 111 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 AC062037.1-201ENST00000605302 128 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 AP001318.4-201ENST00000616637 121 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 MIR6516-201ENST00000630554 81 ntBASIC1.35□□□□□ -2.19
E2F1Q01094 Y_RNA.309-201ENST00000365046 111 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 Y_RNA.344-201ENST00000365381 112 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 Y_RNA.369-201ENST00000365568 117 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 MIR590-201ENST00000385008 97 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 MT-TN-201ENST00000387400 73 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 RNU6-613P-201ENST00000410412 108 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 AL353813.1-201ENST00000440700 253 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 MIR4264-201ENST00000583520 66 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 MIR7974-201ENST00000615835 79 ntBASIC1.34□□□□□ -2.19
E2F1Q01094 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
E2F1Q01094 Y_RNA.299-201ENST00000364973 94 ntBASIC1.33□□□□□ -2.2
E2F1Q01094 Y_RNA.466-201ENST00000384294 113 ntBASIC1.33□□□□□ -2.2
E2F1Q01094 RNU6-880P-201ENST00000384526 107 ntBASIC1.33□□□□□ -2.2
E2F1Q01094 SNORD12C-201ENST00000386307 89 ntBASIC1.33□□□□□ -2.2
E2F1Q01094 RNA5SP33-201ENST00000516687 98 ntBASIC1.33□□□□□ -2.2
E2F1Q01094 AC007012.1-201ENST00000567192 175 ntBASIC1.33□□□□□ -2.2
E2F1Q01094 MIR3163-201ENST00000581592 73 ntBASIC1.33□□□□□ -2.2
E2F1Q01094 MIR548Z-201ENST00000584743 97 ntBASIC1.33□□□□□ -2.2
E2F1Q01094 MIR377-201ENST00000362145 69 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 Y_RNA.107-201ENST00000363190 121 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 RNU6-654P-201ENST00000364373 107 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 RNU6-53P-201ENST00000365367 106 ntBASIC1.32□□□□□ -2.2
E2F1Q01094 Y_RNA.363-201ENST00000365529 113 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 225.1 ms