Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 RNU7-156P-201ENST00000517214 74 ntBASIC0.66□□□□□ -2.3
CX3CL1P78423 AC133485.4-201ENST00000561835 220 ntBASIC0.66□□□□□ -2.3
CX3CL1P78423 AC138907.4-201ENST00000570107 226 ntBASIC0.66□□□□□ -2.3
CX3CL1P78423 MIR3144-201ENST00000579460 79 ntBASIC0.66□□□□□ -2.3
CX3CL1P78423 AC008608.1-201ENST00000603910 127 ntBASIC0.66□□□□□ -2.3
CX3CL1P78423 MIR6767-201ENST00000637302 66 ntBASIC0.66□□□□□ -2.3
CX3CL1P78423 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.66□□□□□ -2.3
CX3CL1P78423 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CX3CL1P78423 Y_RNA.4-201ENST00000362333 112 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 RNU6-309P-201ENST00000364573 106 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 RNY1P13-201ENST00000365030 105 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 Y_RNA.398-201ENST00000383952 99 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 RNU6-110P-201ENST00000384508 104 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 U8.15-201ENST00000390947 134 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 SNORD93-201ENST00000408813 74 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 AL512326.2-201ENST00000426359 151 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.65□□□□□ -2.31
CX3CL1P78423 RNU7-102P-201ENST00000458948 62 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 RNU6-351P-201ENST00000516097 100 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 SNORD92-201ENST00000585078 85 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 AC021443.1-201ENST00000604478 211 ntBASIC0.65□□□□□ -2.31
CX3CL1P78423 MIR373-201ENST00000362273 69 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 SNORD115-2-201ENST00000362842 82 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 Y_RNA.164-201ENST00000363709 102 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU1-93P-201ENST00000364704 169 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 SNORD115-20-201ENST00000365099 82 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-949P-201ENST00000384040 107 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 Y_RNA.555-201ENST00000384673 110 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-460P-201ENST00000391158 108 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-447P-201ENST00000410293 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-1118P-201ENST00000410382 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-1076P-201ENST00000410397 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-355P-201ENST00000410427 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-791P-201ENST00000410467 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-705P-201ENST00000410601 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-1100P-201ENST00000410691 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-860P-201ENST00000410860 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU4-83P-201ENST00000410863 133 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-1217P-201ENST00000411276 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU6-785P-201ENST00000411324 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 COX6CP6-201ENST00000490840 228 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 RNU7-35P-201ENST00000517174 62 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 AC004812.1-201ENST00000540773 146 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 MIR4653-201ENST00000585107 83 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 U6.90-201ENST00000614007 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 U6.70-201ENST00000620287 104 ntBASIC0.64□□□□□ -2.31
CX3CL1P78423 MIR513C-201ENST00000401352 84 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 MIR1276-201ENST00000408707 83 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 RNU6-1086P-201ENST00000410930 100 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 AC096949.1-201ENST00000412047 152 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 RNU7-164P-201ENST00000459221 62 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 SNORA25.12-201ENST00000516202 82 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 RNA5SP33-201ENST00000516687 98 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 AC090897.1-201ENST00000580909 226 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 MIR8070-201ENST00000616510 88 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 MIR8066-201ENST00000617280 78 ntBASIC0.63□□□□□ -2.31
CX3CL1P78423 HSBP1P2-201ENST00000299671 229 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 Y_RNA.42-201ENST00000362660 108 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 RNU6-915P-201ENST00000364943 103 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 Y_RNA.366-201ENST00000365540 102 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 RNY1P8-201ENST00000383970 114 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 SNORA32-201ENST00000384072 121 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 Y_RNA.531-201ENST00000384589 121 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 RNU7-123P-201ENST00000515911 60 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 RNU7-79P-201ENST00000516082 62 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 MTND5P41-201ENST00000517498 206 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 MIR3612-201ENST00000579753 87 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 MIR548AE2-201ENST00000583456 67 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 AC108081.1-201ENST00000604358 221 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 AL589743.1-201ENST00000551932 2712 ntBASIC0.62□□□□□ -2.31
CX3CL1P78423 Y_RNA.588-201ENST00000391254 102 ntBASIC0.61□□□□□ -2.31
CX3CL1P78423 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
CX3CL1P78423 AL606490.4-201ENST00000423117 127 ntBASIC0.61□□□□□ -2.31
CX3CL1P78423 RNU5E-3P-201ENST00000515913 68 ntBASIC0.61□□□□□ -2.31
CX3CL1P78423 MIR548X2-201ENST00000579776 100 ntBASIC0.61□□□□□ -2.31
CX3CL1P78423 MIR6504-201ENST00000613520 61 ntBASIC0.61□□□□□ -2.31
CX3CL1P78423 AC021753.1-201ENST00000635724 168 ntBASIC0.61□□□□□ -2.31
CX3CL1P78423 RNU6-403P-201ENST00000363163 104 ntBASIC0.6□□□□□ -2.31
CX3CL1P78423 Y_RNA.180-201ENST00000363867 113 ntBASIC0.6□□□□□ -2.31
CX3CL1P78423 Y_RNA.298-201ENST00000364960 107 ntBASIC0.6□□□□□ -2.31
CX3CL1P78423 Y_RNA.400-201ENST00000383963 111 ntBASIC0.6□□□□□ -2.31
CX3CL1P78423 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
CX3CL1P78423 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.6□□□□□ -2.31
CX3CL1P78423 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.59□□□□□ -2.31
CX3CL1P78423 MIR18A-201ENST00000362310 71 ntBASIC0.59□□□□□ -2.31
CX3CL1P78423 Y_RNA.13-201ENST00000362403 112 ntBASIC0.59□□□□□ -2.31
CX3CL1P78423 Y_RNA.215-201ENST00000364204 112 ntBASIC0.59□□□□□ -2.31
CX3CL1P78423 SNORD114-22-201ENST00000365423 72 ntBASIC0.59□□□□□ -2.31
CX3CL1P78423 MIR520E-201ENST00000384867 87 ntBASIC0.59□□□□□ -2.31
CX3CL1P78423 MIR569-201ENST00000385228 96 ntBASIC0.59□□□□□ -2.31
CX3CL1P78423 SNORD100-201ENST00000408573 76 ntBASIC0.59□□□□□ -2.31
CX3CL1P78423 AC004941.2-201ENST00000427009 228 ntBASIC0.59□□□□□ -2.31
CX3CL1P78423 MIR4491-201ENST00000581087 68 ntBASIC0.59□□□□□ -2.31
CX3CL1P78423 SNORA25.9-201ENST00000365087 128 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 RNU4-45P-201ENST00000365469 141 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 Y_RNA.420-201ENST00000384043 110 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 SNORA72.6-201ENST00000384520 129 ntBASIC0.58□□□□□ -2.32
CX3CL1P78423 MIR1270-201ENST00000459320 83 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms