Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU7-152P-201ENST00000458982 64 ntBASIC-0.73□□□□□ -2.53
ACTBP60709 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.73□□□□□ -2.53
ACTBP60709 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.73□□□□□ -2.53
ACTBP60709 RNU6-1258P-201ENST00000516911 111 ntBASIC-0.73□□□□□ -2.53
ACTBP60709 RNU6-509P-201ENST00000363519 107 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 RNU4-84P-201ENST00000364200 139 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 MIR626-201ENST00000385032 94 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 SNRPGP8-201ENST00000454064 226 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 RNU6-893P-201ENST00000458841 100 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 RNU6-507P-201ENST00000516045 100 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 Y_RNA.757-201ENST00000578934 114 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 AL356055.1-201ENST00000602528 446 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 MTND4LP32-201ENST00000636111 270 ntBASIC-0.74□□□□□ -2.53
ACTBP60709 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.75□□□□□ -2.53
ACTBP60709 RNU6-865P-201ENST00000364772 107 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 Y_RNA.572-201ENST00000384757 98 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 MIR516B1-201ENST00000385211 90 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 SNORD115-46-201ENST00000390982 71 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.75□□□□□ -2.53
ACTBP60709 AL731563.1-201ENST00000442202 214 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 FGF7P6-202ENST00000451282 293 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.75□□□□□ -2.53
ACTBP60709 MTND4LP30-201ENST00000454092 297 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 RNA5SP484-201ENST00000458857 111 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 MIR548AX-201ENST00000580117 73 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 MIR548H5-201ENST00000580314 60 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 MIR3129-201ENST00000581095 76 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 AC006006.1-201ENST00000603082 144 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 AC098479.1-201ENST00000609225 154 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 MIR376A1-201ENST00000616574 68 ntBASIC-0.75□□□□□ -2.53
ACTBP60709 Y_RNA.6-201ENST00000362350 114 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 SNORD114-14-201ENST00000362723 75 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 RNY1P2-201ENST00000364820 117 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 RNU6-449P-201ENST00000383914 107 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 MIR635-201ENST00000384830 98 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 RNU6-735P-201ENST00000410612 107 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 RNU6-138P-201ENST00000515952 107 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 RNA5SP169-201ENST00000517268 117 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 IGKV1-22-201ENST00000524313 326 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 AC040926.1-201ENST00000530195 238 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 AL365205.2-201ENST00000594586 68 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-0.76□□□□□ -2.53
ACTBP60709 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.77□□□□□ -2.53
ACTBP60709 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.77□□□□□ -2.53
ACTBP60709 Y_RNA.445-201ENST00000384168 102 ntBASIC-0.77□□□□□ -2.53
ACTBP60709 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.77□□□□□ -2.53
ACTBP60709 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.77□□□□□ -2.53
ACTBP60709 AC016907.1-201ENST00000419483 435 ntBASIC-0.77□□□□□ -2.53
ACTBP60709 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.77□□□□□ -2.53
ACTBP60709 AC105081.1-201ENST00000617727 106 ntBASIC-0.77□□□□□ -2.53
ACTBP60709 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.78□□□□□ -2.53
ACTBP60709 Y_RNA.187-201ENST00000363918 113 ntBASIC-0.78□□□□□ -2.53
ACTBP60709 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.78□□□□□ -2.53
ACTBP60709 RNU6-662P-201ENST00000384253 104 ntBASIC-0.78□□□□□ -2.53
ACTBP60709 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.78□□□□□ -2.53
ACTBP60709 RNU6-277P-201ENST00000516272 106 ntBASIC-0.78□□□□□ -2.53
ACTBP60709 RNU7-10P-201ENST00000607194 63 ntBASIC-0.78□□□□□ -2.53
ACTBP60709 AC084781.2-201ENST00000615568 161 ntBASIC-0.78□□□□□ -2.53
ACTBP60709 snoU18.1-201ENST00000629629 71 ntBASIC-0.78□□□□□ -2.53
ACTBP60709 Y_RNA.5-201ENST00000362334 102 ntBASIC-0.79□□□□□ -2.54
ACTBP60709 RNU6-290P-201ENST00000365212 101 ntBASIC-0.79□□□□□ -2.54
ACTBP60709 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.79□□□□□ -2.54
ACTBP60709 SNORA3B-201ENST00000391305 131 ntBASIC-0.79□□□□□ -2.54
ACTBP60709 AL589823.1-201ENST00000429577 183 ntBASIC-0.79□□□□□ -2.54
ACTBP60709 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.79□□□□□ -2.54
ACTBP60709 RNU7-137P-201ENST00000516788 62 ntBASIC-0.79□□□□□ -2.54
ACTBP60709 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.79□□□□□ -2.54
ACTBP60709 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 Y_RNA.183-201ENST00000363882 113 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 RNU6-326P-201ENST00000365480 107 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 RNU6-429P-201ENST00000384582 108 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 SNORD116-4-201ENST00000384733 96 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.8□□□□□ -2.54
ACTBP60709 AC097635.1-201ENST00000450678 155 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 snoU13.11-201ENST00000459219 104 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 RNA5SP67-201ENST00000516422 131 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 SNORA27.4-201ENST00000516650 95 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 SCARNA15-202ENST00000516881 127 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 RNA5SP66-201ENST00000517178 101 ntBASIC-0.8□□□□□ -2.54
ACTBP60709 SNORD115-2-201ENST00000362842 82 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 Y_RNA.221-201ENST00000364248 96 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 SNORD115-20-201ENST00000365099 82 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 RNU4-70P-201ENST00000384579 139 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 Y_RNA.541-201ENST00000384640 113 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 MIR599-201ENST00000385069 95 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 MT-TL1-201ENST00000386347 75 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 MIR3920-201ENST00000581751 86 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 AC073869.6-201ENST00000640656 341 ntBASIC-0.81□□□□□ -2.54
ACTBP60709 UBE2WP1-201ENST00000362030 340 ntBASIC-0.82□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms