Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 RNU6-1123P-201ENST00000362347 106 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 RNU6-633P-201ENST00000362612 103 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 RNU6-509P-201ENST00000363519 107 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 RNU6-1244P-201ENST00000363614 108 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 RNY1P4-201ENST00000384595 115 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 MIR34C-201ENST00000384831 77 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 SNORA17.3-201ENST00000391159 129 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 AC108667.1-201ENST00000428618 249 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 RNU7-79P-201ENST00000516082 62 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 SNORD67.1-201ENST00000516618 108 ntBASIC2.14□□□□□ -2.07
ERVFC1P60507 Y_RNA.313-201ENST00000365095 103 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 Y_RNA.437-201ENST00000384113 113 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 MIR548G-201ENST00000408442 89 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 RPS29P28-201ENST00000446439 141 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 AC079804.2-201ENST00000490376 200 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 RNU6-857P-201ENST00000515893 110 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 RNU7-137P-201ENST00000516788 62 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.13□□□□□ -2.07
ERVFC1P60507 MIR5002-201ENST00000584713 97 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.13□□□□□ -2.07
ERVFC1P60507 SNRPGP19-201ENST00000603826 189 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 SEPT14P17-201ENST00000617978 177 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC2.13□□□□□ -2.07
ERVFC1P60507 AC006160.2-201ENST00000637708 154 ntBASIC2.13□□□□□ -2.07
ERVFC1P60507 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ERVFC1P60507 Y_RNA.173-201ENST00000363776 113 ntBASIC2.12□□□□□ -2.07
ERVFC1P60507 RNU4-52P-201ENST00000384209 138 ntBASIC2.12□□□□□ -2.07
ERVFC1P60507 RNU6-24P-201ENST00000384440 107 ntBASIC2.12□□□□□ -2.07
ERVFC1P60507 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.12□□□□□ -2.07
ERVFC1P60507 RNU6-917P-201ENST00000516294 104 ntBASIC2.12□□□□□ -2.07
ERVFC1P60507 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.12□□□□□ -2.07
ERVFC1P60507 MIR4287-201ENST00000579398 78 ntBASIC2.12□□□□□ -2.07
ERVFC1P60507 RNU6-90P-201ENST00000606352 106 ntBASIC2.12□□□□□ -2.07
ERVFC1P60507 MIR548BB-201ENST00000626714 66 ntBASIC2.12□□□□□ -2.07
ERVFC1P60507 RNU6-865P-201ENST00000364772 107 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 RNU6-1296P-201ENST00000383879 107 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 Y_RNA.448-201ENST00000384185 108 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 Y_RNA.567-201ENST00000384736 106 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 MIR653-201ENST00000385279 96 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 RNU6-1321P-201ENST00000390905 107 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 Y_RNA.607-201ENST00000410597 98 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 AL356379.1-201ENST00000414105 126 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 AC019288.1-201ENST00000557918 224 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 CYP3A52P-201ENST00000563326 91 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 MIR4498-201ENST00000577599 66 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 MIR5089-201ENST00000580047 84 ntBASIC2.11□□□□□ -2.07
ERVFC1P60507 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
ERVFC1P60507 Y_RNA.98-201ENST00000363109 102 ntBASIC2.1□□□□□ -2.07
ERVFC1P60507 MIR194-1-201ENST00000384892 85 ntBASIC2.1□□□□□ -2.07
ERVFC1P60507 MIR520C-201ENST00000385005 87 ntBASIC2.1□□□□□ -2.07
ERVFC1P60507 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.1□□□□□ -2.07
ERVFC1P60507 AL161932.1-201ENST00000437408 146 ntBASIC2.1□□□□□ -2.07
ERVFC1P60507 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
ERVFC1P60507 AC090255.1-201ENST00000495779 349 ntBASIC2.1□□□□□ -2.07
ERVFC1P60507 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.1□□□□□ -2.07
ERVFC1P60507 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
ERVFC1P60507 Y_RNA.221-201ENST00000364248 96 ntBASIC2.09□□□□□ -2.07
ERVFC1P60507 SNORD38.2-201ENST00000384470 69 ntBASIC2.09□□□□□ -2.07
ERVFC1P60507 Y_RNA.611-201ENST00000410682 108 ntBASIC2.09□□□□□ -2.07
ERVFC1P60507 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
ERVFC1P60507 AC003989.2-201ENST00000440224 169 ntBASIC2.09□□□□□ -2.07
ERVFC1P60507 RNU7-48P-201ENST00000458875 63 ntBASIC2.09□□□□□ -2.07
ERVFC1P60507 MIR548AO-201ENST00000579992 96 ntBASIC2.09□□□□□ -2.07
ERVFC1P60507 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
ERVFC1P60507 SNORD38B-201ENST00000384690 67 ntBASIC2.08□□□□□ -2.08
ERVFC1P60507 Y_RNA.609-201ENST00000410669 89 ntBASIC2.08□□□□□ -2.08
ERVFC1P60507 RNA5SP450-201ENST00000411206 102 ntBASIC2.08□□□□□ -2.08
ERVFC1P60507 RNU6-1053P-201ENST00000515930 101 ntBASIC2.08□□□□□ -2.08
ERVFC1P60507 MIR514B-201ENST00000516774 80 ntBASIC2.08□□□□□ -2.08
ERVFC1P60507 SNORA31.17-201ENST00000516953 127 ntBASIC2.08□□□□□ -2.08
ERVFC1P60507 SNORD38B-202ENST00000625943 69 ntBASIC2.08□□□□□ -2.08
ERVFC1P60507 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
ERVFC1P60507 MIRLET7G-201ENST00000362280 84 ntBASIC2.07□□□□□ -2.08
ERVFC1P60507 Y_RNA.191-201ENST00000363972 113 ntBASIC2.07□□□□□ -2.08
ERVFC1P60507 RNY1P13-201ENST00000365030 105 ntBASIC2.07□□□□□ -2.08
ERVFC1P60507 RNU6-613P-201ENST00000410412 108 ntBASIC2.07□□□□□ -2.08
ERVFC1P60507 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC2.07□□□□□ -2.08
ERVFC1P60507 AP001362.1-201ENST00000625165 124 ntBASIC2.07□□□□□ -2.08
ERVFC1P60507 MIR4251-201ENST00000635819 61 ntBASIC2.07□□□□□ -2.08
ERVFC1P60507 AL359851.1-201ENST00000569460 4997 ntBASIC2.07□□□□□ -2.08
ERVFC1P60507 HSBP1P2-201ENST00000299671 229 ntBASIC2.06□□□□□ -2.08
ERVFC1P60507 RNU6-1125P-201ENST00000363601 107 ntBASIC2.06□□□□□ -2.08
ERVFC1P60507 RNU6-203P-201ENST00000384038 104 ntBASIC2.06□□□□□ -2.08
ERVFC1P60507 RNU6-480P-201ENST00000384332 107 ntBASIC2.06□□□□□ -2.08
ERVFC1P60507 AC004965.1-201ENST00000413033 213 ntBASIC2.06□□□□□ -2.08
ERVFC1P60507 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.06□□□□□ -2.08
ERVFC1P60507 MIR3935-201ENST00000583472 104 ntBASIC2.06□□□□□ -2.08
ERVFC1P60507 AL627230.6-201ENST00000611129 280 ntBASIC2.06□□□□□ -2.08
ERVFC1P60507 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.06□□□□□ -2.08
ERVFC1P60507 AP000553.5-201ENST00000641933 54 ntBASIC2.06□□□□□ -2.08
ERVFC1P60507 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ERVFC1P60507 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
ERVFC1P60507 RNA5SP276-201ENST00000362580 94 ntBASIC2.05□□□□□ -2.08
ERVFC1P60507 AL161935.2-201ENST00000414627 60 ntBASIC2.05□□□□□ -2.08
ERVFC1P60507 RPL31P63-201ENST00000422565 375 ntBASIC2.05□□□□□ -2.08
ERVFC1P60507 SPINT5P-201ENST00000448174 155 ntBASIC2.05□□□□□ -2.08
ERVFC1P60507 RNU1-98P-201ENST00000458992 160 ntBASIC2.05□□□□□ -2.08
ERVFC1P60507 AC104435.1-201ENST00000483483 166 ntBASIC2.05□□□□□ -2.08
ERVFC1P60507 RNU6-322P-201ENST00000516010 103 ntBASIC2.05□□□□□ -2.08
ERVFC1P60507 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 227.2 ms