Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU6-111P-201ENST00000517179 105 ntBASIC0.62□□□□□ -2.31
RHBDL3P58872 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
RHBDL3P58872 MIR1273G-201ENST00000577677 100 ntBASIC0.62□□□□□ -2.31
RHBDL3P58872 MIR3149-201ENST00000584629 83 ntBASIC0.62□□□□□ -2.31
RHBDL3P58872 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.61□□□□□ -2.31
RHBDL3P58872 RNU6-1020P-201ENST00000363684 107 ntBASIC0.61□□□□□ -2.31
RHBDL3P58872 Y_RNA.412-201ENST00000384001 104 ntBASIC0.61□□□□□ -2.31
RHBDL3P58872 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
RHBDL3P58872 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.61□□□□□ -2.31
RHBDL3P58872 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
RHBDL3P58872 AC141846.1-201ENST00000568348 142 ntBASIC0.61□□□□□ -2.31
RHBDL3P58872 MIR4503-201ENST00000582187 83 ntBASIC0.61□□□□□ -2.31
RHBDL3P58872 AC092634.7-201ENST00000621022 103 ntBASIC0.61□□□□□ -2.31
RHBDL3P58872 RNY1P6-201ENST00000384193 109 ntBASIC0.6□□□□□ -2.31
RHBDL3P58872 Y_RNA.489-201ENST00000384410 101 ntBASIC0.6□□□□□ -2.31
RHBDL3P58872 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.6□□□□□ -2.31
RHBDL3P58872 AC107027.2-201ENST00000512197 115 ntBASIC0.6□□□□□ -2.31
RHBDL3P58872 AC008608.1-201ENST00000603910 127 ntBASIC0.6□□□□□ -2.31
RHBDL3P58872 MIR411-201ENST00000362239 96 ntBASIC0.59□□□□□ -2.31
RHBDL3P58872 RNU6-312P-201ENST00000364629 107 ntBASIC0.59□□□□□ -2.31
RHBDL3P58872 U6.106-201ENST00000636360 105 ntBASIC0.59□□□□□ -2.31
RHBDL3P58872 Y_RNA.307-201ENST00000365022 117 ntBASIC0.58□□□□□ -2.32
RHBDL3P58872 RNY1P8-201ENST00000383970 114 ntBASIC0.58□□□□□ -2.32
RHBDL3P58872 RNU6-463P-201ENST00000384340 107 ntBASIC0.58□□□□□ -2.32
RHBDL3P58872 RNU6-918P-201ENST00000391219 106 ntBASIC0.58□□□□□ -2.32
RHBDL3P58872 SNORD71-201ENST00000411292 86 ntBASIC0.58□□□□□ -2.32
RHBDL3P58872 RNU6-469P-201ENST00000516253 101 ntBASIC0.58□□□□□ -2.32
RHBDL3P58872 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.58□□□□□ -2.32
RHBDL3P58872 MTND5P32-201ENST00000560711 1802 ntBASIC0.58□□□□□ -2.32
RHBDL3P58872 RNU6-1086P-201ENST00000410930 100 ntBASIC0.57□□□□□ -2.32
RHBDL3P58872 MIR5087-201ENST00000635826 76 ntBASIC0.57□□□□□ -2.32
RHBDL3P58872 Y_RNA.337-201ENST00000365312 102 ntBASIC0.56□□□□□ -2.32
RHBDL3P58872 RNU6-949P-201ENST00000384040 107 ntBASIC0.56□□□□□ -2.32
RHBDL3P58872 MTATP6P21-201ENST00000440681 189 ntBASIC0.56□□□□□ -2.32
RHBDL3P58872 Y_RNA.42-201ENST00000362660 108 ntBASIC0.55□□□□□ -2.32
RHBDL3P58872 SNORA18-201ENST00000384416 132 ntBASIC0.55□□□□□ -2.32
RHBDL3P58872 RNU6-679P-201ENST00000391003 106 ntBASIC0.55□□□□□ -2.32
RHBDL3P58872 AL022718.1-201ENST00000412004 84 ntBASIC0.55□□□□□ -2.32
RHBDL3P58872 AC114737.2-201ENST00000421583 173 ntBASIC0.55□□□□□ -2.32
RHBDL3P58872 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
RHBDL3P58872 Y_RNA.680-201ENST00000516441 93 ntBASIC0.55□□□□□ -2.32
RHBDL3P58872 RNU6-135P-201ENST00000516769 101 ntBASIC0.55□□□□□ -2.32
RHBDL3P58872 RNU6-765P-201ENST00000516916 99 ntBASIC0.55□□□□□ -2.32
RHBDL3P58872 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.55□□□□□ -2.32
RHBDL3P58872 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
RHBDL3P58872 AC090625.1-201ENST00000357130 210 ntBASIC0.54□□□□□ -2.32
RHBDL3P58872 RNU6-403P-201ENST00000363163 104 ntBASIC0.54□□□□□ -2.32
RHBDL3P58872 Y_RNA.144-201ENST00000363521 113 ntBASIC0.54□□□□□ -2.32
RHBDL3P58872 RNU4-16P-201ENST00000364737 141 ntBASIC0.54□□□□□ -2.32
RHBDL3P58872 SNORA40.8-201ENST00000411034 126 ntBASIC0.54□□□□□ -2.32
RHBDL3P58872 AC009779.6-201ENST00000603972 165 ntBASIC0.54□□□□□ -2.32
RHBDL3P58872 MIR8066-201ENST00000617280 78 ntBASIC0.54□□□□□ -2.32
RHBDL3P58872 MIR924-201ENST00000638017 53 ntBASIC0.54□□□□□ -2.32
RHBDL3P58872 Y_RNA.30-201ENST00000362572 97 ntBASIC0.53□□□□□ -2.32
RHBDL3P58872 Y_RNA.52-201ENST00000362760 96 ntBASIC0.53□□□□□ -2.32
RHBDL3P58872 Y_RNA.174-201ENST00000363781 105 ntBASIC0.53□□□□□ -2.32
RHBDL3P58872 U8.15-201ENST00000390947 134 ntBASIC0.53□□□□□ -2.32
RHBDL3P58872 SNORA25.12-201ENST00000516202 82 ntBASIC0.53□□□□□ -2.32
RHBDL3P58872 AC011603.4-201ENST00000611325 277 ntBASIC0.53□□□□□ -2.32
RHBDL3P58872 AC243829.6-201ENST00000612652 106 ntBASIC0.53□□□□□ -2.32
RHBDL3P58872 MIR6082-201ENST00000613604 109 ntBASIC0.53□□□□□ -2.32
RHBDL3P58872 Y_RNA.258-201ENST00000364613 105 ntBASIC0.52□□□□□ -2.33
RHBDL3P58872 RNU6-818P-201ENST00000364837 108 ntBASIC0.52□□□□□ -2.33
RHBDL3P58872 Y_RNA.374-201ENST00000365606 101 ntBASIC0.52□□□□□ -2.33
RHBDL3P58872 SNORA75.5-201ENST00000391291 81 ntBASIC0.52□□□□□ -2.33
RHBDL3P58872 RNA5SP94-201ENST00000516917 108 ntBASIC0.52□□□□□ -2.33
RHBDL3P58872 MIR3646-201ENST00000578301 84 ntBASIC0.52□□□□□ -2.33
RHBDL3P58872 Y_RNA.757-201ENST00000578934 114 ntBASIC0.52□□□□□ -2.33
RHBDL3P58872 Y_RNA.357-201ENST00000365487 109 ntBASIC0.51□□□□□ -2.33
RHBDL3P58872 RNA5SP144-201ENST00000410846 116 ntBASIC0.51□□□□□ -2.33
RHBDL3P58872 RNU7-113P-201ENST00000459273 62 ntBASIC0.51□□□□□ -2.33
RHBDL3P58872 MIR3678-201ENST00000578455 94 ntBASIC0.51□□□□□ -2.33
RHBDL3P58872 RNU6-1099P-201ENST00000363533 107 ntBASIC0.5□□□□□ -2.33
RHBDL3P58872 RNA5SP457-201ENST00000363657 124 ntBASIC0.5□□□□□ -2.33
RHBDL3P58872 Y_RNA.233-201ENST00000364407 101 ntBASIC0.5□□□□□ -2.33
RHBDL3P58872 VTRNA1-3-201ENST00000365645 89 ntBASIC0.5□□□□□ -2.33
RHBDL3P58872 RNA5SP330-201ENST00000517096 96 ntBASIC0.5□□□□□ -2.33
RHBDL3P58872 AC072026.1-201ENST00000605023 201 ntBASIC0.5□□□□□ -2.33
RHBDL3P58872 MIR330-201ENST00000362196 94 ntBASIC0.49□□□□□ -2.33
RHBDL3P58872 MIRLET7D-201ENST00000362263 87 ntBASIC0.49□□□□□ -2.33
RHBDL3P58872 Y_RNA.13-201ENST00000362403 112 ntBASIC0.49□□□□□ -2.33
RHBDL3P58872 Y_RNA.115-201ENST00000363272 98 ntBASIC0.49□□□□□ -2.33
RHBDL3P58872 SNORA72.6-201ENST00000384520 129 ntBASIC0.49□□□□□ -2.33
RHBDL3P58872 RNU6-768P-201ENST00000384683 107 ntBASIC0.49□□□□□ -2.33
RHBDL3P58872 MIR518A1-201ENST00000385068 85 ntBASIC0.48□□□□□ -2.33
RHBDL3P58872 AL512326.2-201ENST00000426359 151 ntBASIC0.48□□□□□ -2.33
RHBDL3P58872 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.48□□□□□ -2.33
RHBDL3P58872 RNU6-863P-201ENST00000515989 104 ntBASIC0.48□□□□□ -2.33
RHBDL3P58872 MIR4491-201ENST00000581087 68 ntBASIC0.48□□□□□ -2.33
RHBDL3P58872 MIR6844-201ENST00000637122 62 ntBASIC0.48□□□□□ -2.33
RHBDL3P58872 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.48□□□□□ -2.33
RHBDL3P58872 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
RHBDL3P58872 RNU6-349P-201ENST00000362402 107 ntBASIC0.47□□□□□ -2.33
RHBDL3P58872 RNA5SP517-201ENST00000364724 117 ntBASIC0.47□□□□□ -2.33
RHBDL3P58872 RNY1P13-201ENST00000365030 105 ntBASIC0.47□□□□□ -2.33
RHBDL3P58872 RNU6-690P-201ENST00000365242 106 ntBASIC0.47□□□□□ -2.33
RHBDL3P58872 Y_RNA.588-201ENST00000391254 102 ntBASIC0.47□□□□□ -2.33
RHBDL3P58872 SNORA68.3-201ENST00000515906 83 ntBASIC0.47□□□□□ -2.33
RHBDL3P58872 RNU7-79P-201ENST00000516082 62 ntBASIC0.47□□□□□ -2.33
RHBDL3P58872 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 188.8 ms