Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.03□□□□□ -2.24
HDAC4P56524 snoU13.2-201ENST00000459201 104 ntBASIC1.03□□□□□ -2.24
HDAC4P56524 MIR3121-201ENST00000579680 77 ntBASIC1.03□□□□□ -2.24
HDAC4P56524 AP001340.1-201ENST00000624405 217 ntBASIC1.03□□□□□ -2.24
HDAC4P56524 Y_RNA.171-201ENST00000363760 102 ntBASIC1.02□□□□□ -2.25
HDAC4P56524 Y_RNA.280-201ENST00000364765 112 ntBASIC1.02□□□□□ -2.25
HDAC4P56524 Y_RNA.294-201ENST00000364916 102 ntBASIC1.02□□□□□ -2.25
HDAC4P56524 Y_RNA.488-201ENST00000384403 102 ntBASIC1.02□□□□□ -2.25
HDAC4P56524 RNA5SP261-201ENST00000410536 106 ntBASIC1.02□□□□□ -2.25
HDAC4P56524 MTATP6P21-201ENST00000440681 189 ntBASIC1.02□□□□□ -2.25
HDAC4P56524 RNU2-35P-201ENST00000516446 142 ntBASIC1.02□□□□□ -2.25
HDAC4P56524 AC011603.4-201ENST00000611325 277 ntBASIC1.02□□□□□ -2.25
HDAC4P56524 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC1.02□□□□□ -2.25
HDAC4P56524 Y_RNA.30-201ENST00000362572 97 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 RNU6-690P-201ENST00000365242 106 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 MIR588-201ENST00000384900 83 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 MIR942-201ENST00000401111 86 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 RNU6-994P-201ENST00000410507 111 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 FABP5P4-201ENST00000437203 171 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 RNU7-62P-201ENST00000458856 62 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 IGKV1-22-201ENST00000524313 326 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 MIR3152-201ENST00000579801 74 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC1.01□□□□□ -2.25
HDAC4P56524 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.01□□□□□ -2.25
HDAC4P56524 RNU6-774P-201ENST00000363238 107 ntBASIC1□□□□□ -2.25
HDAC4P56524 RNA5SP457-201ENST00000363657 124 ntBASIC1□□□□□ -2.25
HDAC4P56524 Y_RNA.366-201ENST00000365540 102 ntBASIC1□□□□□ -2.25
HDAC4P56524 Y_RNA.568-201ENST00000384742 113 ntBASIC1□□□□□ -2.25
HDAC4P56524 AC067940.1-201ENST00000458411 300 ntBASIC1□□□□□ -2.25
HDAC4P56524 PDCD5P2-201ENST00000507570 312 ntBASIC1□□□□□ -2.25
HDAC4P56524 RNA5SP436-201ENST00000516020 115 ntBASIC1□□□□□ -2.25
HDAC4P56524 MIR30D-201ENST00000362283 70 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 SNORD18B-201ENST00000365659 72 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 Y_RNA.470-201ENST00000384307 117 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 MIR193B-201ENST00000384907 83 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 RNU6-257P-201ENST00000410238 98 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 AL512326.2-201ENST00000426359 151 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 MTND4LP9-201ENST00000427694 174 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 AC015818.7-201ENST00000428754 109 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 AC087499.7-201ENST00000441958 109 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 AP001328.1-201ENST00000528550 176 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 MIR3133-201ENST00000583157 78 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 MIR4305-201ENST00000583252 102 ntBASIC0.99□□□□□ -2.25
HDAC4P56524 AC010332.2-201ENST00000613083 1904 ntBASIC0.98□□□□□ -2.25
HDAC4P56524 RNU6-1165P-201ENST00000410119 107 ntBASIC0.98□□□□□ -2.25
HDAC4P56524 SNORD83.1-201ENST00000411362 77 ntBASIC0.98□□□□□ -2.25
HDAC4P56524 RNU6-1335P-201ENST00000365426 107 ntBASIC0.97□□□□□ -2.25
HDAC4P56524 RNU6-187P-201ENST00000384139 106 ntBASIC0.97□□□□□ -2.25
HDAC4P56524 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.97□□□□□ -2.25
HDAC4P56524 RNU7-123P-201ENST00000515911 60 ntBASIC0.97□□□□□ -2.25
HDAC4P56524 AC133485.4-201ENST00000561835 220 ntBASIC0.97□□□□□ -2.25
HDAC4P56524 AC138907.4-201ENST00000570107 226 ntBASIC0.97□□□□□ -2.25
HDAC4P56524 MIR1273G-201ENST00000577677 100 ntBASIC0.97□□□□□ -2.25
HDAC4P56524 SNORD115-2-201ENST00000362842 82 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 Y_RNA.114-201ENST00000363265 113 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 SNORD115-20-201ENST00000365099 82 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 RNU6-746P-201ENST00000384112 109 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 MIR1270-201ENST00000459320 83 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 AC113410.1-201ENST00000505029 247 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 RNU5E-3P-201ENST00000515913 68 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 Y_RNA.692-201ENST00000516627 105 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 Y_RNA.703-201ENST00000516846 111 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 AC004812.1-201ENST00000540773 146 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 CYP3A137P-201ENST00000562436 69 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 AC021443.1-201ENST00000604478 211 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 AC020891.4-201ENST00000605745 93 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 MIR6857-201ENST00000613267 93 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 AL662814.1-201ENST00000617364 121 ntBASIC0.96□□□□□ -2.26
HDAC4P56524 Y_RNA.68-201ENST00000362881 102 ntBASIC0.95□□□□□ -2.26
HDAC4P56524 RNU6-934P-201ENST00000365154 107 ntBASIC0.95□□□□□ -2.26
HDAC4P56524 SNORA18-201ENST00000384416 132 ntBASIC0.95□□□□□ -2.26
HDAC4P56524 RNU6-1237P-201ENST00000384777 107 ntBASIC0.95□□□□□ -2.26
HDAC4P56524 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
HDAC4P56524 MIR1827-201ENST00000408549 66 ntBASIC0.95□□□□□ -2.26
HDAC4P56524 AC096949.1-201ENST00000412047 152 ntBASIC0.95□□□□□ -2.26
HDAC4P56524 RNU7-164P-201ENST00000459221 62 ntBASIC0.95□□□□□ -2.26
HDAC4P56524 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.95□□□□□ -2.26
HDAC4P56524 AL590095.2-201ENST00000604136 117 ntBASIC0.95□□□□□ -2.26
HDAC4P56524 Y_RNA.298-201ENST00000364960 107 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 Y_RNA.531-201ENST00000384589 121 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 RNU6-1104P-201ENST00000384723 104 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
HDAC4P56524 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 AL022718.1-201ENST00000412004 84 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 RPS26P5-201ENST00000418544 335 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 RNA5SP255-201ENST00000516370 107 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 AC141846.1-201ENST00000568348 142 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 U7.2-201ENST00000607576 63 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 AL136317.1-201ENST00000612653 226 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 AL137067.1-201ENST00000615933 120 ntBASIC0.94□□□□□ -2.26
HDAC4P56524 RNU1-36P-201ENST00000365130 165 ntBASIC0.93□□□□□ -2.26
HDAC4P56524 Y_RNA.343-201ENST00000365354 112 ntBASIC0.93□□□□□ -2.26
HDAC4P56524 Y_RNA.586-201ENST00000391146 98 ntBASIC0.93□□□□□ -2.26
HDAC4P56524 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.93□□□□□ -2.26
HDAC4P56524 AL158147.1-201ENST00000443970 75 ntBASIC0.93□□□□□ -2.26
HDAC4P56524 MIR18B-201ENST00000454574 71 ntBASIC0.93□□□□□ -2.26
HDAC4P56524 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.93□□□□□ -2.26
HDAC4P56524 RNU6-893P-201ENST00000458841 100 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms