Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL022718.1-201ENST00000412004 84 ntBASIC1.01□□□□□ -2.25
CLK1P49759 AL603825.1-201ENST00000438481 80 ntBASIC1.01□□□□□ -2.25
CLK1P49759 AC113410.1-201ENST00000505029 247 ntBASIC1.01□□□□□ -2.25
CLK1P49759 MIR548AI-201ENST00000579940 88 ntBASIC1.01□□□□□ -2.25
CLK1P49759 AL359881.1-201ENST00000602916 267 ntBASIC1.01□□□□□ -2.25
CLK1P49759 AL359821.1-201ENST00000605519 182 ntBASIC1.01□□□□□ -2.25
CLK1P49759 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CLK1P49759 MIR103A2-201ENST00000362154 78 ntBASIC1□□□□□ -2.25
CLK1P49759 RNU6-834P-201ENST00000362367 110 ntBASIC1□□□□□ -2.25
CLK1P49759 RNU6-392P-201ENST00000364926 101 ntBASIC1□□□□□ -2.25
CLK1P49759 Y_RNA.346-201ENST00000365385 112 ntBASIC1□□□□□ -2.25
CLK1P49759 RNU6-429P-201ENST00000384582 108 ntBASIC1□□□□□ -2.25
CLK1P49759 SNORD12C-201ENST00000386307 89 ntBASIC1□□□□□ -2.25
CLK1P49759 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1□□□□□ -2.25
CLK1P49759 Y_RNA.629-201ENST00000411368 105 ntBASIC1□□□□□ -2.25
CLK1P49759 RNU11-2P-201ENST00000516898 142 ntBASIC1□□□□□ -2.25
CLK1P49759 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
CLK1P49759 RNU6-654P-201ENST00000364373 107 ntBASIC0.99□□□□□ -2.25
CLK1P49759 RNU6-1144P-201ENST00000384247 104 ntBASIC0.99□□□□□ -2.25
CLK1P49759 SNORA75.2-201ENST00000391138 150 ntBASIC0.99□□□□□ -2.25
CLK1P49759 SNORA75.3-201ENST00000391231 150 ntBASIC0.99□□□□□ -2.25
CLK1P49759 RNU6-893P-201ENST00000458841 100 ntBASIC0.99□□□□□ -2.25
CLK1P49759 RNU7-113P-201ENST00000459273 62 ntBASIC0.99□□□□□ -2.25
CLK1P49759 AC087343.1-201ENST00000477341 475 ntBASIC0.99□□□□□ -2.25
CLK1P49759 SNORD79.1-201ENST00000516069 84 ntBASIC0.99□□□□□ -2.25
CLK1P49759 MIR548AE2-201ENST00000583456 67 ntBASIC0.99□□□□□ -2.25
CLK1P49759 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
CLK1P49759 RNU6-396P-201ENST00000365369 105 ntBASIC0.98□□□□□ -2.25
CLK1P49759 RNU6-342P-201ENST00000384521 104 ntBASIC0.98□□□□□ -2.25
CLK1P49759 SNORD38B-201ENST00000384690 67 ntBASIC0.98□□□□□ -2.25
CLK1P49759 RNU6-476P-201ENST00000384726 107 ntBASIC0.98□□□□□ -2.25
CLK1P49759 MT-TN-201ENST00000387400 73 ntBASIC0.98□□□□□ -2.25
CLK1P49759 RNU6-613P-201ENST00000410412 108 ntBASIC0.98□□□□□ -2.25
CLK1P49759 RNU6-1064P-201ENST00000410626 104 ntBASIC0.98□□□□□ -2.25
CLK1P49759 AC002429.1-201ENST00000437672 148 ntBASIC0.98□□□□□ -2.25
CLK1P49759 Y_RNA.649-201ENST00000459077 103 ntBASIC0.98□□□□□ -2.25
CLK1P49759 AC108729.3-201ENST00000513484 108 ntBASIC0.98□□□□□ -2.25
CLK1P49759 ACA64.5-201ENST00000516207 127 ntBASIC0.98□□□□□ -2.25
CLK1P49759 MIR2115-201ENST00000516657 100 ntBASIC0.98□□□□□ -2.25
CLK1P49759 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.98□□□□□ -2.25
CLK1P49759 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.98□□□□□ -2.25
CLK1P49759 AL670379.3-201ENST00000605040 251 ntBASIC0.98□□□□□ -2.25
CLK1P49759 SNORD38B-202ENST00000625943 69 ntBASIC0.98□□□□□ -2.25
CLK1P49759 MIR377-201ENST00000362145 69 ntBASIC0.97□□□□□ -2.25
CLK1P49759 MIR563-201ENST00000385080 79 ntBASIC0.97□□□□□ -2.25
CLK1P49759 RNA5SP95-201ENST00000410319 137 ntBASIC0.97□□□□□ -2.25
CLK1P49759 snoU13.2-201ENST00000459201 104 ntBASIC0.97□□□□□ -2.25
CLK1P49759 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.97□□□□□ -2.25
CLK1P49759 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.97□□□□□ -2.25
CLK1P49759 MIR4653-201ENST00000585107 83 ntBASIC0.97□□□□□ -2.25
CLK1P49759 uc_338.6-201ENST00000613544 171 ntBASIC0.97□□□□□ -2.25
CLK1P49759 MIR6740-201ENST00000618268 113 ntBASIC0.97□□□□□ -2.25
CLK1P49759 AC087741.2-201ENST00000619415 172 ntBASIC0.97□□□□□ -2.25
CLK1P49759 AL035470.1-201ENST00000622571 220 ntBASIC0.97□□□□□ -2.25
CLK1P49759 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.97□□□□□ -2.25
CLK1P49759 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
CLK1P49759 RNA5SP432-201ENST00000362480 116 ntBASIC0.96□□□□□ -2.26
CLK1P49759 Y_RNA.35-201ENST00000362601 101 ntBASIC0.96□□□□□ -2.26
CLK1P49759 Y_RNA.213-201ENST00000364178 111 ntBASIC0.96□□□□□ -2.26
CLK1P49759 RNU6-580P-201ENST00000365159 107 ntBASIC0.96□□□□□ -2.26
CLK1P49759 RNU6-215P-201ENST00000365169 102 ntBASIC0.96□□□□□ -2.26
CLK1P49759 Y_RNA.344-201ENST00000365381 112 ntBASIC0.96□□□□□ -2.26
CLK1P49759 Y_RNA.354-201ENST00000365448 111 ntBASIC0.96□□□□□ -2.26
CLK1P49759 RNU6-1056P-201ENST00000383996 107 ntBASIC0.96□□□□□ -2.26
CLK1P49759 SNORA18-201ENST00000384416 132 ntBASIC0.96□□□□□ -2.26
CLK1P49759 Y_RNA.549-201ENST00000384657 102 ntBASIC0.96□□□□□ -2.26
CLK1P49759 MIR548A3-201ENST00000385297 97 ntBASIC0.96□□□□□ -2.26
CLK1P49759 RNU4-69P-201ENST00000410677 143 ntBASIC0.96□□□□□ -2.26
CLK1P49759 PSMC1P5-201ENST00000512850 177 ntBASIC0.96□□□□□ -2.26
CLK1P49759 RNA5SP33-201ENST00000516687 98 ntBASIC0.96□□□□□ -2.26
CLK1P49759 RNU7-35P-201ENST00000517174 62 ntBASIC0.96□□□□□ -2.26
CLK1P49759 MTND5P34-201ENST00000568888 325 ntBASIC0.96□□□□□ -2.26
CLK1P49759 MIR3163-201ENST00000581592 73 ntBASIC0.96□□□□□ -2.26
CLK1P49759 MIR4264-201ENST00000583520 66 ntBASIC0.96□□□□□ -2.26
CLK1P49759 MIR6129-201ENST00000616087 109 ntBASIC0.96□□□□□ -2.26
CLK1P49759 SEPT14P17-201ENST00000617978 177 ntBASIC0.96□□□□□ -2.26
CLK1P49759 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
CLK1P49759 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
CLK1P49759 SNORD115-19-201ENST00000363098 82 ntBASIC0.95□□□□□ -2.26
CLK1P49759 SNORD115-18-201ENST00000363293 82 ntBASIC0.95□□□□□ -2.26
CLK1P49759 SNORD115-17-201ENST00000364612 82 ntBASIC0.95□□□□□ -2.26
CLK1P49759 MIR548D2-201ENST00000384955 97 ntBASIC0.95□□□□□ -2.26
CLK1P49759 MIR548A1-201ENST00000385041 97 ntBASIC0.95□□□□□ -2.26
CLK1P49759 RNU6-205P-201ENST00000390858 107 ntBASIC0.95□□□□□ -2.26
CLK1P49759 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
CLK1P49759 RNU7-21P-201ENST00000459430 62 ntBASIC0.95□□□□□ -2.26
CLK1P49759 SNORD124-201ENST00000459577 104 ntBASIC0.95□□□□□ -2.26
CLK1P49759 TRMT112P2-201ENST00000512910 132 ntBASIC0.95□□□□□ -2.26
CLK1P49759 RNU6-589P-201ENST00000516485 107 ntBASIC0.95□□□□□ -2.26
CLK1P49759 AC007012.1-201ENST00000567192 175 ntBASIC0.95□□□□□ -2.26
CLK1P49759 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
CLK1P49759 MIR30D-201ENST00000362283 70 ntBASIC0.94□□□□□ -2.26
CLK1P49759 RNY1P10-201ENST00000363268 113 ntBASIC0.94□□□□□ -2.26
CLK1P49759 Y_RNA.168-201ENST00000363740 102 ntBASIC0.94□□□□□ -2.26
CLK1P49759 Y_RNA.299-201ENST00000364973 94 ntBASIC0.94□□□□□ -2.26
CLK1P49759 Y_RNA.362-201ENST00000365518 110 ntBASIC0.94□□□□□ -2.26
CLK1P49759 SNORA32-201ENST00000384072 121 ntBASIC0.94□□□□□ -2.26
CLK1P49759 SNORD116-21-201ENST00000384507 92 ntBASIC0.94□□□□□ -2.26
CLK1P49759 SNORD20-201ENST00000384550 80 ntBASIC0.94□□□□□ -2.26
CLK1P49759 MIR608-201ENST00000384820 100 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 192.2 ms