Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SNORD127-201ENST00000458892 86 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 RNU6-531P-201ENST00000516694 104 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 SCARNA16.5-201ENST00000517114 183 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 AL117187.1-201ENST00000555482 181 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 MIR4752-201ENST00000579672 72 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 MIR6515-201ENST00000619843 57 ntBASIC0.06□□□□□ -2.4
CX3CR1P49238 Y_RNA.47-201ENST00000362697 108 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 Y_RNA.269-201ENST00000364685 89 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 Y_RNA.423-201ENST00000384057 113 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 Y_RNA.562-201ENST00000384695 113 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 MIR606-201ENST00000384851 96 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 RNA5SP144-201ENST00000410846 116 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 RNU6-1086P-201ENST00000410930 100 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 MIR1270-201ENST00000459320 83 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 RNU7-79P-201ENST00000516082 62 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 RNU6-469P-201ENST00000516253 101 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 RNU6-1232P-201ENST00000516299 86 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 Y_RNA.697-201ENST00000516776 113 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 RNU7-35P-201ENST00000517174 62 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 MIR4315-1-201ENST00000636800 73 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 MIR4315-2-201ENST00000640925 73 ntBASIC0.05□□□□□ -2.4
CX3CR1P49238 SNORD114-9-201ENST00000364370 72 ntBASIC0.04□□□□□ -2.4
CX3CR1P49238 RNU6-643P-201ENST00000384018 107 ntBASIC0.04□□□□□ -2.4
CX3CR1P49238 MIR568-201ENST00000385036 95 ntBASIC0.04□□□□□ -2.4
CX3CR1P49238 MIR518E-201ENST00000385252 88 ntBASIC0.04□□□□□ -2.4
CX3CR1P49238 RNA5SP236-201ENST00000516169 116 ntBASIC0.04□□□□□ -2.4
CX3CR1P49238 AC008737.2-201ENST00000599446 118 ntBASIC0.04□□□□□ -2.4
CX3CR1P49238 AL359881.1-201ENST00000602916 267 ntBASIC0.04□□□□□ -2.4
CX3CR1P49238 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
CX3CR1P49238 AC244669.1-204ENST00000621564 178 ntBASIC0.04□□□□□ -2.4
CX3CR1P49238 SNORA42.1-201ENST00000363515 137 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 Y_RNA.174-201ENST00000363781 105 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 SNORA2A-201ENST00000383885 135 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 RNU5E-9P-201ENST00000411164 104 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 AL358176.2-201ENST00000425769 204 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 RNA5SP227-201ENST00000516184 113 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 Y_RNA.680-201ENST00000516441 93 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 RNU7-70P-201ENST00000516941 66 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 AC006504.6-201ENST00000590142 199 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 U6.106-201ENST00000636360 105 ntBASIC0.03□□□□□ -2.4
CX3CR1P49238 Y_RNA.52-201ENST00000362760 96 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 RNA5SP133-201ENST00000363368 119 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.182-201ENST00000363880 111 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 SNORD27-201ENST00000363981 72 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.412-201ENST00000384001 104 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 RNU6-1126P-201ENST00000384002 107 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.422-201ENST00000384054 114 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 RNY1P6-201ENST00000384193 109 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.477-201ENST00000384352 108 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 RNU6-738P-201ENST00000384531 106 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.571-201ENST00000384753 98 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 SNORD58.1-201ENST00000391313 66 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 MIR548H2-201ENST00000408874 88 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.626-201ENST00000411288 95 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.797-201ENST00000515977 94 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.02□□□□□ -2.41
CX3CR1P49238 AC138749.4-201ENST00000563970 127 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 MIR4639-201ENST00000584938 69 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 AC104408.1-201ENST00000605241 170 ntBASIC0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.65-201ENST00000362846 100 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 Y_RNA.120-201ENST00000363304 110 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 RNU6-1082P-201ENST00000364574 107 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 SNORA32-201ENST00000384072 121 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 RNU6-127P-201ENST00000390897 107 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 Y_RNA.673-201ENST00000516306 88 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 RNU2-35P-201ENST00000516446 142 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 MIR4514-201ENST00000581410 57 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 U6.109-201ENST00000636749 87 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 AC091304.10-201ENST00000641554 121 ntBASIC0.01□□□□□ -2.41
CX3CR1P49238 SNORD115-2-201ENST00000362842 82 ntBASIC0□□□□□ -2.41
CX3CR1P49238 Y_RNA.121-201ENST00000363309 113 ntBASIC0□□□□□ -2.41
CX3CR1P49238 Y_RNA.145-201ENST00000363527 102 ntBASIC0□□□□□ -2.41
CX3CR1P49238 RNY1P11-201ENST00000363759 113 ntBASIC0□□□□□ -2.41
CX3CR1P49238 RNU4-67P-201ENST00000364569 141 ntBASIC0□□□□□ -2.41
CX3CR1P49238 RNU6-275P-201ENST00000364910 107 ntBASIC0□□□□□ -2.41
CX3CR1P49238 RNU6-702P-201ENST00000364982 107 ntBASIC0□□□□□ -2.41
CX3CR1P49238 SNORD115-20-201ENST00000365099 82 ntBASIC0□□□□□ -2.41
CX3CR1P49238 MIR598-201ENST00000384868 97 ntBASIC0□□□□□ -2.41
CX3CR1P49238 SNORD67.1-201ENST00000516618 108 ntBASIC0□□□□□ -2.41
CX3CR1P49238 RNU7-137P-201ENST00000516788 62 ntBASIC0□□□□□ -2.41
CX3CR1P49238 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0□□□□□ -2.41
CX3CR1P49238 MIR548AE2-201ENST00000583456 67 ntBASIC0□□□□□ -2.41
CX3CR1P49238 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 SNORA9.1-201ENST00000362412 131 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 SNORD114-5-201ENST00000362928 70 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 RNU6-508P-201ENST00000363231 103 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 RNU6-768P-201ENST00000384683 107 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 RNU7-113P-201ENST00000459273 62 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 RNA5SP33-201ENST00000516687 98 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 RNU2-60P-201ENST00000517290 128 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 MIR499B-201ENST00000636498 73 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 U6.104-201ENST00000637979 90 ntBASIC-0.01□□□□□ -2.41
CX3CR1P49238 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.02□□□□□ -2.41
CX3CR1P49238 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.02□□□□□ -2.41
CX3CR1P49238 RNU6-1229P-201ENST00000364295 107 ntBASIC-0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms