Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 Y_RNA.304-201ENST00000365011 112 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 MIR626-201ENST00000385032 94 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 MIR1302-11-201ENST00000408051 138 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 MIR1302-9-201ENST00000408365 138 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 MIR1302-10-201ENST00000408734 138 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 AL731563.1-201ENST00000442202 214 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.37□□□□□ -2.47
COL18A1P39060 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNU7-70P-201ENST00000516941 66 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 AC037487.3-201ENST00000606668 112 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 MIR1302-2-201ENST00000607096 138 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 U6atac.1-201ENST00000616025 117 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 AL162376.1-201ENST00000624117 175 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNY1P13-201ENST00000365030 105 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNU6-326P-201ENST00000365480 107 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNU6-597P-201ENST00000365620 102 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 Y_RNA.380-201ENST00000365663 111 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 Y_RNA.416-201ENST00000384014 113 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNU4-70P-201ENST00000384579 139 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 MIR1285-2-201ENST00000408311 88 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNU6-277P-201ENST00000516272 106 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNU1-29P-201ENST00000606574 126 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 PART1_1.1-201ENST00000611761 217 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 AC091932.4-201ENST00000623386 200 ntBASIC-0.37□□□□□ -2.47
COL18A1P39060 RNU6-161P-201ENST00000363051 106 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 RNA5SP245-201ENST00000364239 121 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 SNORA22B-201ENST00000383876 138 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 RNU6-484P-201ENST00000384016 107 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 SNORA1-201ENST00000384107 130 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 AC138393.2-201ENST00000414742 246 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 AC138749.4-201ENST00000563970 127 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 MIR6738-201ENST00000619620 64 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 AC090574.1-201ENST00000623186 233 ntBASIC-0.38□□□□□ -2.47
COL18A1P39060 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.39□□□□□ -2.47
COL18A1P39060 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.39□□□□□ -2.47
COL18A1P39060 RNY4P27-201ENST00000363341 96 ntBASIC-0.39□□□□□ -2.47
COL18A1P39060 SNORA18-201ENST00000384416 132 ntBASIC-0.39□□□□□ -2.47
COL18A1P39060 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.39□□□□□ -2.47
COL18A1P39060 RNU7-79P-201ENST00000516082 62 ntBASIC-0.39□□□□□ -2.47
COL18A1P39060 Y_RNA.684-201ENST00000516510 99 ntBASIC-0.39□□□□□ -2.47
COL18A1P39060 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.39□□□□□ -2.47
COL18A1P39060 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-0.39□□□□□ -2.47
COL18A1P39060 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC-0.39□□□□□ -2.47
COL18A1P39060 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 RNU4-10P-201ENST00000364383 140 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 MIR501-201ENST00000390204 84 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
COL18A1P39060 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.4□□□□□ -2.47
COL18A1P39060 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 RNU6-531P-201ENST00000516694 104 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 AL442067.1-201ENST00000613261 223 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 AC073869.9-201ENST00000641610 120 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 Y_RNA.91-201ENST00000363042 107 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 RNU6-1203P-201ENST00000410703 110 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 Y_RNA.632-201ENST00000459189 102 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 CR383656.4-201ENST00000546909 122 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 AC021613.1-201ENST00000623880 111 ntBASIC-0.4□□□□□ -2.47
COL18A1P39060 SNORA22.1-201ENST00000362701 134 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 Y_RNA.55-201ENST00000362797 102 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 Y_RNA.197-201ENST00000364004 102 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 RNU6-1292P-201ENST00000383856 107 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 Y_RNA.581-201ENST00000391017 97 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 SNORA75.1-201ENST00000391130 148 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 RNA5SP461-201ENST00000516451 104 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 MIR3925-201ENST00000584674 77 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 AC097639.2-201ENST00000603159 172 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 MIR1302-1-201ENST00000637932 143 ntBASIC-0.41□□□□□ -2.47
COL18A1P39060 SNORA25.1-201ENST00000362326 128 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 RNU6-662P-201ENST00000384253 104 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 RNU6-1228P-201ENST00000391014 107 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 SNORA79-201ENST00000408376 140 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 RPL21P38-201ENST00000418090 167 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 AC244505.6-201ENST00000452829 130 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 MIR3129-201ENST00000581095 76 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 AC011921.3-201ENST00000605540 361 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 MIR3666-201ENST00000607845 111 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 AL132765.2-201ENST00000610812 351 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 AC090971.5-201ENST00000621102 293 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 Y_RNA.70-201ENST00000362886 110 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 Y_RNA.248-201ENST00000364501 109 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 RNU6-702P-201ENST00000364982 107 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 RNU6-102P-201ENST00000384485 104 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 MT-TT-201ENST00000387460 66 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 RNU6-897P-201ENST00000517135 105 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 MIR378D2-201ENST00000580636 98 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 MIR4677-201ENST00000584153 80 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 MIR4263-201ENST00000584745 83 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 AL008718.3-201ENST00000610217 321 ntBASIC-0.42□□□□□ -2.48
COL18A1P39060 RNA5SP133-201ENST00000363368 119 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms