Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AC003982.1-202ENST00000469928 248 ntBASIC2.71□□□□□ -1.98
VARSP26640 FGF7P7-201ENST00000514120 227 ntBASIC2.71□□□□□ -1.98
VARSP26640 Y_RNA.660-201ENST00000516002 120 ntBASIC2.71□□□□□ -1.98
VARSP26640 RNU6-871P-201ENST00000516122 100 ntBASIC2.71□□□□□ -1.98
VARSP26640 RNU6-1015P-201ENST00000517121 99 ntBASIC2.71□□□□□ -1.98
VARSP26640 MIR3605-201ENST00000583214 100 ntBASIC2.71□□□□□ -1.98
VARSP26640 PRELID3BP2-201ENST00000605362 201 ntBASIC2.71□□□□□ -1.98
VARSP26640 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
VARSP26640 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
VARSP26640 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.7□□□□□ -1.98
VARSP26640 AC062016.1-201ENST00000355719 319 ntBASIC2.7□□□□□ -1.98
VARSP26640 RNU4-82P-201ENST00000362443 140 ntBASIC2.7□□□□□ -1.98
VARSP26640 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
VARSP26640 RNU6-360P-201ENST00000390944 104 ntBASIC2.7□□□□□ -1.98
VARSP26640 HSPE1P24-201ENST00000450782 238 ntBASIC2.7□□□□□ -1.98
VARSP26640 SNORA31.17-201ENST00000516953 127 ntBASIC2.7□□□□□ -1.98
VARSP26640 RNU6-448P-201ENST00000517052 107 ntBASIC2.7□□□□□ -1.98
VARSP26640 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
VARSP26640 Z82195.2-201ENST00000612348 18351 ntBASIC2.7□□□□□ -1.98
VARSP26640 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
VARSP26640 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.69□□□□□ -1.98
VARSP26640 MIR635-201ENST00000384830 98 ntBASIC2.69□□□□□ -1.98
VARSP26640 MIR196B-201ENST00000384852 84 ntBASIC2.69□□□□□ -1.98
VARSP26640 MIR516A2-201ENST00000384888 90 ntBASIC2.69□□□□□ -1.98
VARSP26640 MIR516A1-201ENST00000385033 90 ntBASIC2.69□□□□□ -1.98
VARSP26640 MIR9-1-201ENST00000385198 89 ntBASIC2.69□□□□□ -1.98
VARSP26640 MIR653-201ENST00000385279 96 ntBASIC2.69□□□□□ -1.98
VARSP26640 RNU4ATAC9P-201ENST00000517146 126 ntBASIC2.69□□□□□ -1.98
VARSP26640 MIR4529-201ENST00000578110 78 ntBASIC2.69□□□□□ -1.98
VARSP26640 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
VARSP26640 MIR26A1-201ENST00000362205 77 ntBASIC2.68□□□□□ -1.98
VARSP26640 SNORD36A-201ENST00000362874 73 ntBASIC2.68□□□□□ -1.98
VARSP26640 Y_RNA.532-201ENST00000384590 113 ntBASIC2.68□□□□□ -1.98
VARSP26640 AC125388.1-201ENST00000459631 156 ntBASIC2.68□□□□□ -1.98
VARSP26640 RNU6-70P-201ENST00000516438 60 ntBASIC2.68□□□□□ -1.98
VARSP26640 RNU7-193P-201ENST00000516723 65 ntBASIC2.68□□□□□ -1.98
VARSP26640 SNORA4-201ENST00000584302 138 ntBASIC2.68□□□□□ -1.98
VARSP26640 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.68□□□□□ -1.98
VARSP26640 RNA5SP48-201ENST00000363969 126 ntBASIC2.67□□□□□ -1.98
VARSP26640 Y_RNA.340-201ENST00000365330 92 ntBASIC2.67□□□□□ -1.98
VARSP26640 RNU6-243P-201ENST00000391140 107 ntBASIC2.67□□□□□ -1.98
VARSP26640 SNORD111.1-201ENST00000516421 86 ntBASIC2.67□□□□□ -1.98
VARSP26640 RNU6-807P-201ENST00000516805 107 ntBASIC2.67□□□□□ -1.98
VARSP26640 AL096861.1-201ENST00000610899 123 ntBASIC2.67□□□□□ -1.98
VARSP26640 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
VARSP26640 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
VARSP26640 DEFA7P-201ENST00000382676 285 ntBASIC2.66□□□□□ -1.98
VARSP26640 RNU6-132P-201ENST00000383863 107 ntBASIC2.66□□□□□ -1.98
VARSP26640 RNU6-1254P-201ENST00000391266 104 ntBASIC2.66□□□□□ -1.98
VARSP26640 AC004965.1-201ENST00000413033 213 ntBASIC2.66□□□□□ -1.98
VARSP26640 SNORA31.25-201ENST00000517242 134 ntBASIC2.66□□□□□ -1.98
VARSP26640 AC079600.2-201ENST00000550076 130 ntBASIC2.66□□□□□ -1.98
VARSP26640 AC104996.3-201ENST00000590718 94 ntBASIC2.66□□□□□ -1.98
VARSP26640 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
VARSP26640 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
VARSP26640 RNU1-112P-201ENST00000364401 164 ntBASIC2.65□□□□□ -1.99
VARSP26640 Y_RNA.283-201ENST00000364798 112 ntBASIC2.65□□□□□ -1.99
VARSP26640 MIR563-201ENST00000385080 79 ntBASIC2.65□□□□□ -1.99
VARSP26640 SNORD77.2-201ENST00000391045 68 ntBASIC2.65□□□□□ -1.99
VARSP26640 SNORD23.1-201ENST00000408212 104 ntBASIC2.65□□□□□ -1.99
VARSP26640 RNU6-75P-201ENST00000515944 104 ntBASIC2.65□□□□□ -1.99
VARSP26640 Y_RNA.681-201ENST00000516445 113 ntBASIC2.65□□□□□ -1.99
VARSP26640 MIR3064-201ENST00000581130 66 ntBASIC2.65□□□□□ -1.99
VARSP26640 MIR6740-201ENST00000618268 113 ntBASIC2.65□□□□□ -1.99
VARSP26640 RNU6-859P-201ENST00000362728 107 ntBASIC2.64□□□□□ -1.99
VARSP26640 Y_RNA.491-201ENST00000384417 107 ntBASIC2.64□□□□□ -1.99
VARSP26640 AL138827.1-201ENST00000402666 306 ntBASIC2.64□□□□□ -1.99
VARSP26640 SNORA31.11-201ENST00000516528 139 ntBASIC2.64□□□□□ -1.99
VARSP26640 RNA5SP402-201ENST00000517148 110 ntBASIC2.64□□□□□ -1.99
VARSP26640 AL137847.3-201ENST00000611521 109 ntBASIC2.64□□□□□ -1.99
VARSP26640 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
VARSP26640 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
VARSP26640 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.63□□□□□ -1.99
VARSP26640 RNA5SP259-201ENST00000365541 109 ntBASIC2.63□□□□□ -1.99
VARSP26640 AC245517.4-201ENST00000448601 281 ntBASIC2.63□□□□□ -1.99
VARSP26640 SNORD109B-201ENST00000458961 67 ntBASIC2.63□□□□□ -1.99
VARSP26640 SNORD109A-201ENST00000459128 67 ntBASIC2.63□□□□□ -1.99
VARSP26640 MIR3192-201ENST00000584920 77 ntBASIC2.63□□□□□ -1.99
VARSP26640 AP000942.3-201ENST00000603702 160 ntBASIC2.63□□□□□ -1.99
VARSP26640 AL357312.1-201ENST00000603879 298 ntBASIC2.63□□□□□ -1.99
VARSP26640 MIR1297-201ENST00000637311 77 ntBASIC2.63□□□□□ -1.99
VARSP26640 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
VARSP26640 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
VARSP26640 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.62□□□□□ -1.99
VARSP26640 MIR6073-201ENST00000352083 89 ntBASIC2.62□□□□□ -1.99
VARSP26640 MIR30D-201ENST00000362283 70 ntBASIC2.62□□□□□ -1.99
VARSP26640 RNU6-208P-201ENST00000362431 107 ntBASIC2.62□□□□□ -1.99
VARSP26640 Y_RNA.264-201ENST00000364665 102 ntBASIC2.62□□□□□ -1.99
VARSP26640 RNU6-396P-201ENST00000365369 105 ntBASIC2.62□□□□□ -1.99
VARSP26640 SNORA70B-201ENST00000384210 135 ntBASIC2.62□□□□□ -1.99
VARSP26640 MIR194-1-201ENST00000384892 85 ntBASIC2.62□□□□□ -1.99
VARSP26640 MIR548U-201ENST00000390728 81 ntBASIC2.62□□□□□ -1.99
VARSP26640 RNU6-466P-201ENST00000391224 103 ntBASIC2.62□□□□□ -1.99
VARSP26640 RNA5SP181-201ENST00000410246 98 ntBASIC2.62□□□□□ -1.99
VARSP26640 AC015818.7-201ENST00000428754 109 ntBASIC2.62□□□□□ -1.99
VARSP26640 AL513328.1-201ENST00000446460 224 ntBASIC2.62□□□□□ -1.99
VARSP26640 RNU6-687P-201ENST00000516443 89 ntBASIC2.62□□□□□ -1.99
VARSP26640 RNA5SP82-201ENST00000516707 92 ntBASIC2.62□□□□□ -1.99
VARSP26640 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.62□□□□□ -1.99
VARSP26640 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 283.5 ms