Protein–RNA interactions for Protein: P14651

HOXB3, Homeobox protein Hox-B3, humanhuman

Predicted RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3P14651 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HOXB3P14651 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
HOXB3P14651 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXB3P14651 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.21□□□□□ -1.9
HOXB3P14651 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HOXB3P14651 RNU7-62P-201ENST00000458856 62 ntBASIC3.2□□□□□ -1.9
HOXB3P14651 AC008413.1-201ENST00000511864 177 ntBASIC3.2□□□□□ -1.9
HOXB3P14651 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HOXB3P14651 RNU6-482P-201ENST00000391068 107 ntBASIC3.19□□□□□ -1.9
HOXB3P14651 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.19□□□□□ -1.9
HOXB3P14651 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
HOXB3P14651 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC3.19□□□□□ -1.9
HOXB3P14651 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HOXB3P14651 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
HOXB3P14651 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HOXB3P14651 SNORA25.3-201ENST00000363205 127 ntBASIC3.18□□□□□ -1.9
HOXB3P14651 Y_RNA.379-201ENST00000365653 102 ntBASIC3.18□□□□□ -1.9
HOXB3P14651 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HOXB3P14651 U3.27-201ENST00000391237 200 ntBASIC3.18□□□□□ -1.9
HOXB3P14651 Y_RNA.588-201ENST00000391254 102 ntBASIC3.18□□□□□ -1.9
HOXB3P14651 SNORD93-201ENST00000408813 74 ntBASIC3.18□□□□□ -1.9
HOXB3P14651 AC108210.2-201ENST00000503681 201 ntBASIC3.18□□□□□ -1.9
HOXB3P14651 RNVU1-2-201ENST00000516326 135 ntBASIC3.18□□□□□ -1.9
HOXB3P14651 RNU6-122P-201ENST00000516818 107 ntBASIC3.18□□□□□ -1.9
HOXB3P14651 AL078603.1-201ENST00000603824 313 ntBASIC3.18□□□□□ -1.9
HOXB3P14651 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.18□□□□□ -1.9
HOXB3P14651 Y_RNA.56-201ENST00000362798 112 ntBASIC3.17□□□□□ -1.9
HOXB3P14651 RNU6-112P-201ENST00000363599 104 ntBASIC3.17□□□□□ -1.9
HOXB3P14651 RNU7-26P-201ENST00000458980 63 ntBASIC3.17□□□□□ -1.9
HOXB3P14651 RNU6-1123P-201ENST00000362347 106 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 Y_RNA.355-201ENST00000365462 98 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 RNU1-138P-201ENST00000384093 164 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 MT-TN-201ENST00000387400 73 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXB3P14651 SNORA48.1-201ENST00000390879 135 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 RNU4-47P-201ENST00000410876 114 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 AL591806.2-201ENST00000433122 173 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 AC097635.1-201ENST00000450678 155 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 RN7SL863P-201ENST00000462370 296 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 SNORD111.1-201ENST00000516421 86 ntBASIC3.16□□□□□ -1.9
HOXB3P14651 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HOXB3P14651 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
HOXB3P14651 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.15□□□□□ -1.9
HOXB3P14651 RNU6-403P-201ENST00000363163 104 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 SNORD21-201ENST00000383953 95 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 MIR489-201ENST00000384923 84 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 U8.13-201ENST00000390842 128 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 RNA5SP385-201ENST00000515947 110 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 SNORA31.15-201ENST00000516771 132 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 MIR3126-201ENST00000577443 74 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXB3P14651 AC103810.8-201ENST00000607347 118 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.15□□□□□ -1.91
HOXB3P14651 AC022202.1-201ENST00000613515 211 ntBASIC3.15□□□□□ -1.91
HOXB3P14651 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HOXB3P14651 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
HOXB3P14651 MIR653-201ENST00000385279 96 ntBASIC3.14□□□□□ -1.91
HOXB3P14651 RNA5SP465-201ENST00000391195 109 ntBASIC3.14□□□□□ -1.91
HOXB3P14651 RNA5SP184-201ENST00000411071 108 ntBASIC3.14□□□□□ -1.91
HOXB3P14651 RPL30P7-201ENST00000479312 323 ntBASIC3.14□□□□□ -1.91
HOXB3P14651 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
HOXB3P14651 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
HOXB3P14651 AC073869.9-201ENST00000641610 120 ntBASIC3.14□□□□□ -1.91
HOXB3P14651 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXB3P14651 AC062016.1-201ENST00000355719 319 ntBASIC3.13□□□□□ -1.91
HOXB3P14651 MIR148B-201ENST00000362252 99 ntBASIC3.13□□□□□ -1.91
HOXB3P14651 MIR7-2-201ENST00000384970 110 ntBASIC3.13□□□□□ -1.91
HOXB3P14651 RNU6-1054P-201ENST00000411293 104 ntBASIC3.13□□□□□ -1.91
HOXB3P14651 MIR2115-201ENST00000516657 100 ntBASIC3.13□□□□□ -1.91
HOXB3P14651 AP000942.3-201ENST00000603702 160 ntBASIC3.13□□□□□ -1.91
HOXB3P14651 uc_338.1-201ENST00000612113 180 ntBASIC3.13□□□□□ -1.91
HOXB3P14651 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.13□□□□□ -1.91
HOXB3P14651 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
HOXB3P14651 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
HOXB3P14651 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
HOXB3P14651 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXB3P14651 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXB3P14651 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HOXB3P14651 Y_RNA.258-201ENST00000364613 105 ntBASIC3.12□□□□□ -1.91
HOXB3P14651 Y_RNA.338-201ENST00000365320 114 ntBASIC3.12□□□□□ -1.91
HOXB3P14651 RN7SKP123-201ENST00000410732 291 ntBASIC3.12□□□□□ -1.91
HOXB3P14651 AP004217.1-201ENST00000480579 346 ntBASIC3.12□□□□□ -1.91
HOXB3P14651 AC008885.1-201ENST00000514930 301 ntBASIC3.12□□□□□ -1.91
HOXB3P14651 DEFB122-202ENST00000569013 197 ntBASIC3.12□□□□□ -1.91
HOXB3P14651 AC013244.2-201ENST00000603396 103 ntBASIC3.12□□□□□ -1.91
HOXB3P14651 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXB3P14651 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
HOXB3P14651 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.12□□□□□ -1.91
HOXB3P14651 RNU1-91P-201ENST00000364746 163 ntBASIC3.11□□□□□ -1.91
HOXB3P14651 RNU1-36P-201ENST00000365130 165 ntBASIC3.11□□□□□ -1.91
HOXB3P14651 RNA5SP299-201ENST00000391203 116 ntBASIC3.11□□□□□ -1.91
HOXB3P14651 Y_RNA.697-201ENST00000516776 113 ntBASIC3.11□□□□□ -1.91
HOXB3P14651 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXB3P14651 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
HOXB3P14651 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.11□□□□□ -1.91
HOXB3P14651 U8.2-201ENST00000363156 134 ntBASIC3.1□□□□□ -1.91
HOXB3P14651 RNA5SP215-201ENST00000363440 122 ntBASIC3.1□□□□□ -1.91
HOXB3P14651 HMGN2P3-201ENST00000433603 273 ntBASIC3.1□□□□□ -1.91
HOXB3P14651 HMGN2P5-201ENST00000436882 273 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms