Protein–RNA interactions for Protein: P13747

HLA-E, HLA class I histocompatibility antigen, alpha chain E, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-EP13747 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 RNU4-16P-201ENST00000364737 141 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 Y_RNA.634-201ENST00000364811 113 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 NDUFAF4P4-201ENST00000454883 502 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 RNU6-893P-201ENST00000458841 100 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 RNU6-1213P-201ENST00000517075 94 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 MIR4306-201ENST00000583390 91 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 MIR3611-201ENST00000584484 83 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 Y_RNA.772-201ENST00000606692 102 ntBASIC-1.32□□□□□ -2.62
HLA-EP13747 MIR519E-201ENST00000385075 84 ntBASIC-1.33□□□□□ -2.62
HLA-EP13747 SNORA53-201ENST00000391141 249 ntBASIC-1.33□□□□□ -2.62
HLA-EP13747 AC093423.1-201ENST00000440817 142 ntBASIC-1.33□□□□□ -2.62
HLA-EP13747 Y_RNA.655-201ENST00000515919 96 ntBASIC-1.33□□□□□ -2.62
HLA-EP13747 AC140658.3-201ENST00000567603 271 ntBASIC-1.33□□□□□ -2.62
HLA-EP13747 AC138305.3-201ENST00000624988 240 ntBASIC-1.33□□□□□ -2.62
HLA-EP13747 AL669831.3-213ENST00000636676 183 ntBASIC-1.33□□□□□ -2.62
HLA-EP13747 MTND5P18-201ENST00000445624 1801 ntBASIC-1.33□□□□□ -2.62
HLA-EP13747 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 SNORD115-44-201ENST00000365391 82 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 snoU13.13-201ENST00000458842 104 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 RNA5SP180-201ENST00000516181 101 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 RNU6-1299P-201ENST00000516316 100 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 SNORD67.1-201ENST00000516618 108 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 AC145350.1-201ENST00000567426 208 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 MIR3179-1-201ENST00000578940 84 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 MIR3179-2-201ENST00000579107 84 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 MIR3179-3-201ENST00000579566 84 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 Z99129.1-201ENST00000612510 255 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 MIR3179-4-201ENST00000617599 84 ntBASIC-1.34□□□□□ -2.62
HLA-EP13747 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.35□□□□□ -2.63
HLA-EP13747 RNU6-937P-201ENST00000384325 106 ntBASIC-1.35□□□□□ -2.63
HLA-EP13747 RNU6-764P-201ENST00000516396 105 ntBASIC-1.35□□□□□ -2.63
HLA-EP13747 RNU7-70P-201ENST00000516941 66 ntBASIC-1.35□□□□□ -2.63
HLA-EP13747 MIR4460-201ENST00000577862 86 ntBASIC-1.35□□□□□ -2.63
HLA-EP13747 MIR5692C2-201ENST00000577959 77 ntBASIC-1.35□□□□□ -2.63
HLA-EP13747 MIR20A-201ENST00000362279 71 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 RNY4P6-201ENST00000363667 96 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 Y_RNA.314-201ENST00000365114 102 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 RNU6-484P-201ENST00000384016 107 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 SNORD63-201ENST00000384262 68 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 Y_RNA.470-201ENST00000384307 117 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 AC096644.2-201ENST00000429278 159 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.36□□□□□ -2.63
HLA-EP13747 RNU6-415P-201ENST00000516252 97 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 MIR3129-201ENST00000581095 76 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 MIR548AG2-201ENST00000581228 64 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 AL359881.1-201ENST00000602916 267 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 AC011603.4-201ENST00000611325 277 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 WT1-AS_8.1-201ENST00000615200 275 ntBASIC-1.36□□□□□ -2.63
HLA-EP13747 SNORD114-10-201ENST00000363409 72 ntBASIC-1.37□□□□□ -2.63
HLA-EP13747 Y_RNA.813-201ENST00000364639 102 ntBASIC-1.37□□□□□ -2.63
HLA-EP13747 Y_RNA.286-201ENST00000364813 102 ntBASIC-1.37□□□□□ -2.63
HLA-EP13747 Y_RNA.380-201ENST00000365663 111 ntBASIC-1.37□□□□□ -2.63
HLA-EP13747 MIR617-201ENST00000385030 97 ntBASIC-1.37□□□□□ -2.63
HLA-EP13747 MIR519A1-201ENST00000385257 85 ntBASIC-1.37□□□□□ -2.63
HLA-EP13747 RNU7-195P-201ENST00000458793 62 ntBASIC-1.37□□□□□ -2.63
HLA-EP13747 Y_RNA.809-201ENST00000516058 95 ntBASIC-1.37□□□□□ -2.63
HLA-EP13747 AC097639.2-201ENST00000603159 172 ntBASIC-1.37□□□□□ -2.63
HLA-EP13747 Y_RNA.418-201ENST00000384029 102 ntBASIC-1.38□□□□□ -2.63
HLA-EP13747 SNORA32-201ENST00000384072 121 ntBASIC-1.38□□□□□ -2.63
HLA-EP13747 RNU6-524P-201ENST00000384270 107 ntBASIC-1.38□□□□□ -2.63
HLA-EP13747 Y_RNA.542-201ENST00000384641 111 ntBASIC-1.38□□□□□ -2.63
HLA-EP13747 MIR518B-201ENST00000385127 83 ntBASIC-1.38□□□□□ -2.63
HLA-EP13747 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.38□□□□□ -2.63
HLA-EP13747 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.38□□□□□ -2.63
HLA-EP13747 RNU7-55P-201ENST00000459426 62 ntBASIC-1.38□□□□□ -2.63
HLA-EP13747 RNA5SP153-201ENST00000516498 76 ntBASIC-1.38□□□□□ -2.63
HLA-EP13747 AC133104.2-201ENST00000615272 193 ntBASIC-1.38□□□□□ -2.63
HLA-EP13747 Y_RNA.23-201ENST00000362496 106 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 MIR526A2-201ENST00000390198 65 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 RNU2-55P-201ENST00000411146 174 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 MRPS35P2-201ENST00000508242 191 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 RNU6-158P-201ENST00000517104 100 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 MIR4500-201ENST00000579472 76 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 VN1R91P-201ENST00000594377 169 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 C8orf59P2-201ENST00000603441 271 ntBASIC-1.39□□□□□ -2.63
HLA-EP13747 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 Y_RNA.432-201ENST00000384087 111 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 MIR517B-201ENST00000385102 67 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 MTND1P1-201ENST00000445453 368 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-1.4□□□□□ -2.63
HLA-EP13747 SNORD22.1-201ENST00000516331 125 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 UBE2V2P2-201ENST00000587677 504 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 SNORD113-5-201ENST00000607261 78 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 AC007485.1-201ENST00000616755 206 ntBASIC-1.4□□□□□ -2.63
HLA-EP13747 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.41□□□□□ -2.64
HLA-EP13747 RNU5E-4P-201ENST00000364931 120 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms