Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 Z97988.1-201ENST00000637697 135 ntBASIC1.64□□□□□ -2.15
HLA-DOAP06340 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DOAP06340 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HLA-DOAP06340 WWP1P1-201ENST00000466609 2769 ntBASIC1.63□□□□□ -2.15
HLA-DOAP06340 Y_RNA.348-201ENST00000365403 103 ntBASIC1.63□□□□□ -2.15
HLA-DOAP06340 RNU6-905P-201ENST00000384434 107 ntBASIC1.63□□□□□ -2.15
HLA-DOAP06340 RNU6-1067P-201ENST00000384752 107 ntBASIC1.63□□□□□ -2.15
HLA-DOAP06340 RNU6-1237P-201ENST00000384777 107 ntBASIC1.63□□□□□ -2.15
HLA-DOAP06340 RNU6-1307P-201ENST00000391012 103 ntBASIC1.63□□□□□ -2.15
HLA-DOAP06340 MIR1302-5-201ENST00000408164 150 ntBASIC1.63□□□□□ -2.15
HLA-DOAP06340 SNORA7.5-201ENST00000410672 110 ntBASIC1.63□□□□□ -2.15
HLA-DOAP06340 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
HLA-DOAP06340 SNORD115-19-201ENST00000363098 82 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 SNORD115-18-201ENST00000363293 82 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 RNU6-640P-201ENST00000363693 105 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 SNORD115-17-201ENST00000364612 82 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 Y_RNA.309-201ENST00000365046 111 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 SNORA18-201ENST00000384416 132 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 AC079140.2-201ENST00000506193 142 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 Y_RNA.677-201ENST00000516401 85 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 PRELID3BP2-201ENST00000605362 201 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.62□□□□□ -2.15
HLA-DOAP06340 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HLA-DOAP06340 RNU6-679P-201ENST00000391003 106 ntBASIC1.61□□□□□ -2.15
HLA-DOAP06340 RPL31P63-201ENST00000422565 375 ntBASIC1.61□□□□□ -2.15
HLA-DOAP06340 AC244023.1-201ENST00000426884 112 ntBASIC1.61□□□□□ -2.15
HLA-DOAP06340 SNORA44.1-201ENST00000517031 108 ntBASIC1.61□□□□□ -2.15
HLA-DOAP06340 MIR3937-201ENST00000580135 106 ntBASIC1.61□□□□□ -2.15
HLA-DOAP06340 AC242498.1-201ENST00000604134 111 ntBASIC1.61□□□□□ -2.15
HLA-DOAP06340 MIR8070-201ENST00000616510 88 ntBASIC1.61□□□□□ -2.15
HLA-DOAP06340 AP001318.4-201ENST00000616637 121 ntBASIC1.61□□□□□ -2.15
HLA-DOAP06340 RNU6-1255P-201ENST00000363434 112 ntBASIC1.6□□□□□ -2.15
HLA-DOAP06340 Y_RNA.155-201ENST00000363632 101 ntBASIC1.6□□□□□ -2.15
HLA-DOAP06340 RNU4-67P-201ENST00000364569 141 ntBASIC1.6□□□□□ -2.15
HLA-DOAP06340 RNA5SP261-201ENST00000410536 106 ntBASIC1.6□□□□□ -2.15
HLA-DOAP06340 RNU1-123P-201ENST00000458950 160 ntBASIC1.6□□□□□ -2.15
HLA-DOAP06340 RNU6-521P-201ENST00000516663 105 ntBASIC1.6□□□□□ -2.15
HLA-DOAP06340 CYP3A52P-201ENST00000563326 91 ntBASIC1.6□□□□□ -2.15
HLA-DOAP06340 MIR6078-201ENST00000611069 100 ntBASIC1.6□□□□□ -2.15
HLA-DOAP06340 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.6□□□□□ -2.15
HLA-DOAP06340 RNU6-363P-201ENST00000362895 105 ntBASIC1.59□□□□□ -2.15
HLA-DOAP06340 Y_RNA.226-201ENST00000364337 114 ntBASIC1.59□□□□□ -2.15
HLA-DOAP06340 Y_RNA.299-201ENST00000364973 94 ntBASIC1.59□□□□□ -2.15
HLA-DOAP06340 RNY4P30-201ENST00000410216 95 ntBASIC1.59□□□□□ -2.15
HLA-DOAP06340 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.59□□□□□ -2.15
HLA-DOAP06340 RNU6-893P-201ENST00000458841 100 ntBASIC1.59□□□□□ -2.15
HLA-DOAP06340 RNU6-904P-201ENST00000516206 101 ntBASIC1.59□□□□□ -2.15
HLA-DOAP06340 MIR548Z-201ENST00000584743 97 ntBASIC1.59□□□□□ -2.15
HLA-DOAP06340 GHRLOS.1-201ENST00000610995 70 ntBASIC1.59□□□□□ -2.15
HLA-DOAP06340 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
HLA-DOAP06340 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.58□□□□□ -2.16
HLA-DOAP06340 Y_RNA.360-201ENST00000365512 102 ntBASIC1.58□□□□□ -2.16
HLA-DOAP06340 MIR577-201ENST00000385196 96 ntBASIC1.58□□□□□ -2.16
HLA-DOAP06340 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.58□□□□□ -2.16
HLA-DOAP06340 MIR5582-201ENST00000579697 68 ntBASIC1.58□□□□□ -2.16
HLA-DOAP06340 AC105081.1-201ENST00000617727 106 ntBASIC1.58□□□□□ -2.16
HLA-DOAP06340 RNU6-1099P-201ENST00000363533 107 ntBASIC1.57□□□□□ -2.16
HLA-DOAP06340 RNU6-409P-201ENST00000384114 104 ntBASIC1.57□□□□□ -2.16
HLA-DOAP06340 RNA5SP95-201ENST00000410319 137 ntBASIC1.57□□□□□ -2.16
HLA-DOAP06340 MIR1912-201ENST00000410389 80 ntBASIC1.57□□□□□ -2.16
HLA-DOAP06340 RNU6-733P-201ENST00000410759 104 ntBASIC1.57□□□□□ -2.16
HLA-DOAP06340 RNU6-1086P-201ENST00000410930 100 ntBASIC1.57□□□□□ -2.16
HLA-DOAP06340 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.57□□□□□ -2.16
HLA-DOAP06340 AC027119.1-201ENST00000440877 241 ntBASIC1.57□□□□□ -2.16
HLA-DOAP06340 RNU6-165P-201ENST00000517170 99 ntBASIC1.57□□□□□ -2.16
HLA-DOAP06340 RNU7-35P-201ENST00000517174 62 ntBASIC1.57□□□□□ -2.16
HLA-DOAP06340 AL161722.3-201ENST00000605789 2983 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 Y_RNA.43-201ENST00000362670 111 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 Y_RNA.247-201ENST00000364500 92 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 SNORA25.9-201ENST00000365087 128 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 MIR488-201ENST00000365739 83 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 Y_RNA.507-201ENST00000384500 99 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 SNORD38B-201ENST00000384690 67 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 SNORD77B-201ENST00000391112 67 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 MIR1185-1-201ENST00000408598 86 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 RPS27P16-201ENST00000425758 201 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 UBL5P1-201ENST00000507979 193 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 RNU7-79P-201ENST00000516082 62 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 RNU6-795P-201ENST00000516323 103 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 SNORD67.1-201ENST00000516618 108 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 MIR3660-201ENST00000584845 100 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 uc_338.6-201ENST00000613544 171 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 SNORD38B-202ENST00000625943 69 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 MIR4679-1-201ENST00000637619 75 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 AC091304.10-201ENST00000641554 121 ntBASIC1.56□□□□□ -2.16
HLA-DOAP06340 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
HLA-DOAP06340 RNU6-654P-201ENST00000364373 107 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 RNU6-1131P-201ENST00000364955 107 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 RNU6-49P-201ENST00000384256 107 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 MIR206-201ENST00000384872 86 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 RNU6-205P-201ENST00000390858 107 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 SNORA40.6-201ENST00000391153 128 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 MIR1287-201ENST00000408492 90 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 AC004223.1-201ENST00000479840 271 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 AC008834.1-201ENST00000511612 175 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 MIR3198-2-201ENST00000577868 80 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 MIR3664-201ENST00000579074 99 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 FAM71BP1-201ENST00000604431 523 ntBASIC1.55□□□□□ -2.16
HLA-DOAP06340 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
HLA-DOAP06340 RNY3P2-201ENST00000362918 102 ntBASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 179.4 ms