Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 RNU1-141P-201ENST00000364623 158 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 RNU6-429P-201ENST00000384582 108 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 MIR181B2-201ENST00000385004 89 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 MT-TT-201ENST00000387460 66 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 SNORA53-201ENST00000391141 249 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 SNORD67.1-201ENST00000516618 108 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 RNA5SP169-201ENST00000517268 117 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 SNORD58B-201ENST00000607313 66 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 AC025253.1-201ENST00000613623 543 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 AC104985.2-201ENST00000620598 500 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 uc_338.10-201ENST00000621872 182 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 MTND4LP32-201ENST00000636111 270 ntBASIC-0.94□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.105-201ENST00000363182 111 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.526-201ENST00000384572 110 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 RNU7-13P-201ENST00000516413 62 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 SNORA20.3-201ENST00000516880 132 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 AC084782.3-201ENST00000612282 578 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 MIR376A1-201ENST00000616574 68 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 AL606534.2-204ENST00000635008 178 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 AC093726.3-201ENST00000637588 150 ntBASIC-0.95□□□□□ -2.56
HLA-DQB2P05538 RNU4-90P-201ENST00000362773 141 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.217-201ENST00000364214 105 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.279-201ENST00000364763 95 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 RNY3P5-201ENST00000384127 102 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 MIR224-201ENST00000384889 81 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 AL603914.1-201ENST00000401964 204 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 AL445193.1-201ENST00000441183 141 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 AL731563.1-201ENST00000442202 214 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 RNU7-74P-201ENST00000459104 62 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.641-201ENST00000459414 105 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 RNU6-758P-201ENST00000516292 89 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 RNA5SP33-201ENST00000516687 98 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 AC006504.6-201ENST00000590142 199 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 AL365205.2-201ENST00000594586 68 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 AL359881.1-201ENST00000602916 267 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 snoU18.1-201ENST00000629629 71 ntBASIC-0.96□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 Y_RNA.199-201ENST00000364014 102 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 RNU1-115P-201ENST00000365329 160 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 RNU6-1336P-201ENST00000383886 109 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 SNORD116-2-201ENST00000384274 95 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 SNORD116-6-201ENST00000384711 96 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 Z95118.1-201ENST00000421372 247 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 RNU7-113P-201ENST00000459273 62 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 AC026407.1-201ENST00000518369 204 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 AC040926.1-201ENST00000530195 238 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 AC113139.1-201ENST00000605049 239 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 AC108676.2-201ENST00000605225 163 ntBASIC-0.97□□□□□ -2.56
HLA-DQB2P05538 SNORD114-29-201ENST00000364819 70 ntBASIC-0.98□□□□□ -2.57
HLA-DQB2P05538 Y_RNA.394-201ENST00000383942 103 ntBASIC-0.98□□□□□ -2.57
HLA-DQB2P05538 YWHAEP2-201ENST00000580066 112 ntBASIC-0.98□□□□□ -2.57
HLA-DQB2P05538 SNORD114-10-201ENST00000363409 72 ntBASIC-0.99□□□□□ -2.57
HLA-DQB2P05538 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.99□□□□□ -2.57
HLA-DQB2P05538 SNORD81.2-201ENST00000365153 76 ntBASIC-0.99□□□□□ -2.57
HLA-DQB2P05538 SNORD116-29-201ENST00000384516 83 ntBASIC-0.99□□□□□ -2.57
HLA-DQB2P05538 SCARNA15-202ENST00000516881 127 ntBASIC-0.99□□□□□ -2.57
HLA-DQB2P05538 RNU6-175P-201ENST00000516896 107 ntBASIC-0.99□□□□□ -2.57
HLA-DQB2P05538 MTND5P40-201ENST00000559945 246 ntBASIC-0.99□□□□□ -2.57
HLA-DQB2P05538 MIR4500-201ENST00000579472 76 ntBASIC-0.99□□□□□ -2.57
HLA-DQB2P05538 UBE2V2P2-201ENST00000587677 504 ntBASIC-0.99□□□□□ -2.57
HLA-DQB2P05538 SNORA25.1-201ENST00000362326 128 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 SNORD115-2-201ENST00000362842 82 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 Y_RNA.152-201ENST00000363578 100 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 SNORD95.1-201ENST00000364099 68 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 Y_RNA.274-201ENST00000364714 101 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 SNORD115-20-201ENST00000365099 82 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 MIR204-201ENST00000385200 110 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 SNORD115-46-201ENST00000390982 71 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 RNY4P36-201ENST00000391116 96 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 AL606845.1-201ENST00000404881 255 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 RNA5SP144-201ENST00000410846 116 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 MTND4LP30-201ENST00000454092 297 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 AC082651.2-201ENST00000496833 166 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1□□□□□ -2.57
HLA-DQB2P05538 AC069503.3-201ENST00000618674 145 ntBASIC-1□□□□□ -2.57
HLA-DQB2P05538 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.01□□□□□ -2.57
HLA-DQB2P05538 MIR539-201ENST00000365690 78 ntBASIC-1.01□□□□□ -2.57
HLA-DQB2P05538 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.01□□□□□ -2.57
HLA-DQB2P05538 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.01□□□□□ -2.57
HLA-DQB2P05538 MIR9-2-201ENST00000384838 87 ntBASIC-1.01□□□□□ -2.57
HLA-DQB2P05538 MIR519A1-201ENST00000385257 85 ntBASIC-1.01□□□□□ -2.57
HLA-DQB2P05538 RNU7-195P-201ENST00000458793 62 ntBASIC-1.01□□□□□ -2.57
HLA-DQB2P05538 MIR548AE1-201ENST00000583292 70 ntBASIC-1.01□□□□□ -2.57
HLA-DQB2P05538 AC112487.2-201ENST00000637950 304 ntBASIC-1.01□□□□□ -2.57
HLA-DQB2P05538 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.02□□□□□ -2.57
HLA-DQB2P05538 AC093423.1-201ENST00000440817 142 ntBASIC-1.02□□□□□ -2.57
HLA-DQB2P05538 RNU6-453P-201ENST00000516819 85 ntBASIC-1.02□□□□□ -2.57
HLA-DQB2P05538 AC092794.1-201ENST00000612734 582 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms